| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_77830
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_77905 |
12 |
2842 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_77905
Contig Sequence (10642 bp)
>contig_77830 10642 assembly3_WGSMorex_rbca.fasta
CGTCTGCGGGCTGATGGCAAAGATTTGGCAGACGACAAATAAAGGAATTCCAGTAGTGAG
TATGGCATTCTCCACGCGTGTTTGTGGACCTCCCGAAGAGTGCAGCGGATGCGGCAAGGC
ACTATGCATCCCAAGAAGGGGATGCCAAGCTGAGGCTATTCTGGGAGCAATTCCAAGCCC
GTGAGCAACCTCTTCTCGTCTCCGACCAGCTGCAATAGTTGATGGAGTTGCATCGGATAG
CTAAGCCAGCCATGAAGGACATCTACATTAGCCTATGGCCTACGGAGCCGCTGCCAAGCA
GCTATTTCAGCATGGTGTAGAAGTTGGTCTCCGCCGCACCCCAGATTGACATCGTAAAGC
GCTCTGTACAAATTGAGGGAGCTAGGATGGCGTTCACGAAGACCATGGTGCATTGGACGA
AATTAAAGCCAACTGAGATGGCCACCGGACCTCCCCCGCCCAGAAAGGAGCATAGGCGGC
CTGAGCTATACTTACCCAATGTTATGGAGGGTCCACGGGCGATAGAAACCCAGTGCTCGA
ACGATGTAACACTTGTAATAGAATACTATCATGTATTGATGGTTAAGCTTTTGAGCAATA
TAATGTTTTTGCTTTGCATGGTATATCACACCTTGCTTTGTATAATTTTGATTCATGTGT
GGCCTTTTTAATTTGAAAGTTTCCAATCGAAGGCTTCAGCCCCCTGGTAGATGCTATCAG
GGGTGTTTTCAATTTCCGCAGTGTTACCCTTAGCCAACACCTTGGTGCCTCGAGGCAGTA
GTGCGGAAGTAAACAAGGCAATCAGACTATGCGGCTCGAATGCTTTCACTTAACCATAGG
AGCTTGACTGCGTGGACTAGTTACTAGCCCCTTGTATTTTGTGATGTTCGGATGTACCCA
GGTGAGAAAACCATTATCAGTTGGTTTGAGTAACTTCAAACCCTTCGTATAACATGGTGA
AGCTCCATCGATTCTTAGTTTAACACTTGTCATCAGATCACAAAACAGTTCGTGCTTATT
ACAACAGTCAATTTTTGGCTTTCTCCACCGAGGTACTTAACCAGACGAGCTAGAAGTACA
ATAGTAGTGGTTCTCTATTTACACATTTAGCCGAACAGGCGGCACTTAAAAGGGTAAGCA
CAAGAGTTGGGCAACCCAACTATTGACCCAAGATATAATTCAGAACCAATGCATATAACA
CAATATCCAAGACACCGAACACACAGGGCAGGAAATGGTATCAGTGTGATGCTTAGGGCG
AGCTTTATAGTCAAACCCCCGGTCAATTAGCTGATCGTACCTAAAATATGTATCAAACTG
GATTGACCTGGTTTCGAAGAGCGGAAAAAGGAAAAAAGGAAAAAAGGCTACACAATATAA
ATGAATGCCATGGGACCGTAAAAGTTGGTCTTTATTTCTGATGAACTCGCGATGTCTATC
TGTACAATCTGATCTGCCCAAGCAACTACTAATAATACTATAAAAATAAATTTATAGAGG
AAAGGTTTACACATGGTCTTTTGCAGATGGTGTGAAGTCCTTTACTATGCCCTATTGGAC
GTCTGTGCCTTTGCTCTCCAGGAAGTTCCCCTTTAGAGGAGGTAGTACTCGGTGAGGGAC
TTCCGGATTAAGGGGTCCTCGGGTAGTCGGGTTGTGCGTTATGTGCCGATCATATGGGTT
GCATCATTGAAGACCGGATTATCTCATGACTACATAATCAAGATAGAAATATCTGAAGAC
TACGCGTGCACTCCAAGGCAGGAGAACCAGTTCAGCCCATCTACCCCTGATCTATCTCGG
TAAGATGTAACCTTAGGGGCCCTGGTGTCTATATAAACCAGAGGATCTTATGCGTAGAGG
CAGGTTATCTCATCTAGGGTTTAGATCATACGATCTCAAGGTAGATCAACTCTGTAACCA
TCATTCCCCATCAATATAATCAAGTAGGATATAGGGTTTTACCTCCTCAAGAGGGCCCGA
ACCTGGGTAAGCATCTCCCCCTCTTTCCTGCAACCCATCGATCTAATCTCCACAGTTTGG
GACCCCCTTCCCGAGATCTGCCGGTTTTGACGCTGACATTGGTGCTTTCATTGAGAGTTC
CGCCGATGGATCACCGAAAGGATCTATGGCTTGCTTGATCGTCAACGATCGAGTCCGTGA
CTAGGGCATCTTCGCCCCCAGACACGTCTCCGTGCTCGGCAGCTTCACGCCGATCATGGA
CCTAATCGACCATCCTTGCTAGATCGGAGGTTTTGTCCCCGGTCATCGGATAAGGTCTGG
AGATTTCGAAATCTCCACCTACTCCTTACGCAATTTGCTCCTTGCTAACCTCATGGCCTC
GGCCGATGAATAGAAAAATCTCGAAGCCTTGTCTTCGAGTCCCCTGTCCAACCATAGTCT
TGGTCCCATCCTCTTCGAAGAGGAGGCTTCAAGCTCGGAACCGACCACAGCGTCCGGATA
GCAGGAAACAACTACTGCCGAATTGTCTTCCTCTCTAGAAGTCGCGGAGGTTAACTCCAA
AAACCTACAAAGGATTGGTCAGGTTATACTCTCGATGTTAAACAAGACGCTCGAGCAGAT
CCAGTTGCTTCAAATCTTGCCTACCCAAAGTCCGACATGTTCAAAGATCGGCTCCGAGGT
GGATTATGCAAAATTTTACGGCCCACCCACCACCCACTTGATTGCCACCATCGAATATCT
AACCGACACATTGGACTATGCCTCAAAAGAGCTCGAGGATATGTATGATGAGGCTCACTA
CCCCACCCCGGTAAACACTTGGAAGTGGACCGCAACATCTACCTACGATGTTTACATGGT
AGACACGCCTCACGATATAGATAATGTCACACCCAAGCAAAACGGCGATAAGCCTATACA
AGATCCCTGAAAACGACGAAATTGATGTAAGCGCTCCAAGGCAAACAAGGGAAGGGCCTC
CGCACAAGCCACACGGGAGAATGCGACCCCTGATGGGCATGGCAACCCCGAGGCTCCTGA
GCACCAACTAGAGGAACCGACCAATGAGGATCCCAACGACCGCAACAATTCGGGCGACAA
CGATGATTACCTCCCTCCCGTAGACCGCCTCGACAACCAAGAAGCCTAAGAATTCGTAAT
TCGTGAAGACCCTGAAGGATAGGAGCAATTTCGACAGCGGCTTATAGCCACAACCCAAAG
ATTAAAAGCAAAGCAACAGCAGCTCCAGGATGAACAGGATACCCTCAATAATCGGTGGAC
GAAAATCCTAGTGGCCGAAGAGGGATACGACACACAATGGCCGGACCAGAAGAAAACATA
CCTGCACTGACGAGTGCTCCCATAGTTCGATGATGAGGCCCCATAACACGTGTCCCCCGA
CACACTGACTACGACCAGCCAGATCGCCCAACCAAAGGGCATGACAGAACGACCAGAGGG
AACGGGTATAGACCAGAAGCTCCGCGCAGAAAAGGTAAAGAGCATATGCACGAGGGGAAC
ACACCCGACCCACGATACTTCAACTCACATCGCAACAGGTCCATCTACGGATCCAGGAGG
TACTCTCCCACTCGATGGGATGACAAACCACCTCTGGGCGCTTACAAGAGCAGAGGCCGG
GAAACATACCGGCTCAACCTGGAGCGATCTCTGGCACAACATAACCCGGATCAGAGGCAC
CGCTCACCCACAGTGTTTCACGGATGAGGTCATGCAGTACCATTTCCCGGAAGGGTTTAA
ACCCATAAAGATCAAACAATACGACGGGACAACAGATCCTACCGTGTGGATAGAGGATTT
CCTTCTCCACATTCATATGGACAGATGAGATAATCTCCACACCATAAAATATTGACCACT
AAAACTCAAAGGACCGGCATGACATTGGCTAAACAGCCTAACTAAATATTCCATTGGATG
CTGGGAAGACCTTGAGGAGGCTTTCCTATCCAACTTTCAGGGAACATATGTTCGGCCACT
TGATTCATCCGATCTTAGCAACGTCCTCCATAGGACGGGGGAATCAACAAGAGAATTCTG
GAACCGGTTCCTCACCAAGAAGAATCAAATCATAGACTGTCCGGATGCCGAAGCAATAGC
TTATTTTCAGCACAATACATGGGACGAATGGCTTGCTAGACAGCTCGGCTAGGACACGCC
GAGAACTATGTCCGCCCTTACCTCCCTCATGACCCGCTTTTGCGTAGGTGAGGATAATTA
GCTAGCTCAGTGCAGCCATAATGCGGATGACCCTGGAACCTCGGAAGTTCGGGACAGAAA
CGGCAAGCCAAGGAAAAACAAGAAAAACATCTCCATCGTAATGGTGATGGCGATGATCCA
ACGTTGGAATCCGTGGTACAAAACCTGGACAGCGAAAGAAACCCTTCAAAGGGAGCAGGG
ATGGACCAACCCCATAGGATAAAATCATGGAATGGCCCTGCCAGATTGATGGTACCCAAG
ACAAGCCAGCCACCCACACCAACCATAATTGTTGGTTGTTCAAATAGGCAGGCAAACTTG
TCACTGATTAACAAAACAGGGGGCCACAAAAGTGAAGACGATGACGAGTTCCATGGCCCA
AACAATGGATGCCAAAAGTTGTCCCCTCCTGAGGTCAAGACCGTGAGCATGATCTATGCC
ACCCACATACCCAAAAAGGAGAGGAAACGGGCACTGCGGGAAGTATATGTCGTAGAGCCC
GTAGAACCTAAATACAACCCATGGTCGGCTTGCCCGATCACTTCCGACCACGGGGATAAT
TTGACCAGTGTCCGTCATGGAGGGTCAACCGCCCTAGTCCTCGATCTCATTATCGATGGT
TTCGACCACACTCGACTCCTCCTGGACGGTGGAAGTAGCCTGAATCTGATTTGTTTGGAT
ACGGTGAAAAACATGGGCATAGATCTGTCACGAATCAAGCCAAGTCGCACTACCTTTAAC
GGAGTGATTCTACGCGTCGAAGCCCGCTGCTCGGGCACGATAACACTGGAAGTCCTGTTC
GGTTCTCCCGACAACTTCTGCAGCATGGACTTGATCTTTGATATCGCCCCCTTTTGCAGT
GGATACCATACCCTGCTTGGCCGCACAACTTTCGCCCAATTTAACACCGTGCACCACGAC
GCCTACATGAAGCTCAAAATGCCTGGACCCAAGGGAGTCATCAGAGTAAACGGAAATACG
GAGTGCTCACTCTCGACCGAGGTGCACATGGCTGCACTAGAAGCTGAATGTCAACACGAC
AACGACACTTCAAGCCACAGGCCGGCAACAAAGGCACAGAGGGGAGGCAAATGAGCCCGA
GCTCAATCCGACCAACCCCACACTTCATCGGCTCAAAGTACACATGGATACAACTCCCAC
GACACGGCCCGAACATCGTCAAGGTATGTCCCTCGACAACACAATTTCATCCATAAAATT
CCATGGGCAGCCGTGGGACCAACCCGCCAGGGATAATTGCTCGGGTCAACCGAGTTATGG
TCCAACACACTCCTACTAACCAAAGGCATGGCATCATGAAGAGCCCAAGCGTCAAGCTTC
TCCGTTCATCAGCACCTTCTCAAGGCCCTCTACTCGAGGTCCGCTTGCTGGTAGCAAATT
CCTGTAAAAGATAGTACCTTCACCCCTAGCACGGGGATATAGATATAGTGCGGGCGAACA
TAGGGTGGACGTCAAGTCACCCATGTAAAGTCGCTTGACAAAGTTGCTTCAACAAACTTG
TACTGATAGTTACCTGTAACAAGCTGCCTCGGTGCTACGGGTTATAAAAATTCGCAGCAC
ACATTATTCCAAGTACTTTTGTATACTTGCATTTTATGCTTATCGGCGCTATTAGGAAAA
AATAATTTTTACACACGCTAAAGTGCTCTCAATCATGGACCGGGGTCTTGGATGTTAGCA
CCACCCCGATTACTATACCGTCACTACTTCTTAAGTGTCTGGTCTCTCGGGTCTTGCGTT
ATATGCATTAGTTCTGAATTATGTCTTGGGTCTACAGTTGGGTTGCCCTGCTCCTGTGCT
TACCACCTTACGTTCCGCTAGTTAGGATAAGGAGTAAAGGGAGAACCATTGTGATTGTAT
TGCTAACTAGCTTGGCTAAAATACCTTAGTGGCGAAAGCCGAAAAGTGACCGTCATAATA
AGCGACAACCGGTCTGCAACCCGAGCTCAACAACAAAATGTCGTTAGAGGCCATTCCGCG
TTATACGGAGGGTTTAAGATTTTGCGGACCCTATGGTAGCTATTTTTAAATTCGGCTTAC
CCGACTACCATGAAAAACATGGGGGCTTCCGATCAGCCCCATAATTTCAACTCCTAAGGC
TAAGTGAAAGCGATGAAGCCCCATATGTGATTACCTCATTTCCTCTACACACTACCACCT
TCGCGCGTCGACTCTTCGGCTAAGGGTAATAGTGTGATCAAACACCCCGAGTAGTATCAA
ACACCCCGATTAACCGGCCAACTGATAGGAGTCAAAATAATACTCAAAACACAAATGCTA
AACATTACAAATATAATTTGTCCGGGAGGCACACGATAATTCAATTACTCGAAGATTATA
TCTTTCGAGCACTTGGTTTCTATAACCCGAGCACCCTTCGTCATGGAGGAAAATACAGCT
CGGGGCGTCTGTGCTCCTTCCCGGCATGTGGAGGCGCGGTCGGCATTGTTAGGGGATTCA
TCCTAGGATAGTGCACCTAGTTCTCGCAAAGGCCATCGAGCTCCTTCTATGCAGACGGAA
TGCTTCAGGACCTCAATCCGAGGCACGACATCAACCAACTTCAGCACTAACACTACAAGA
AATATGCTAACTTGCGACCTTCAATATTGCTCACCGAATGTTCGTTGATTTCCATTTGCG
ACCTTTTTACGACCAAAAACAGACGGTCAAAAACTGAGGGTCTCTAATGAACTATAACGA
CCTTTTTTCTAGAATGGCCAAAGACATTTACAACCATACGAATGGTCGTAGGTTCTACGA
CCAATCATTTTGGCTTTACAATCAAACGAAAGGTCGTAGGTTCTACGACCAATCATTTTG
GTCGTTAGAAATCTGCCCACACCATGTTGGATCCGACGTGGCAAGCTCACGTGGCAGAGT
TACGACTAATTGGATTGGTCATTACCAAGAATCAACCCGGTCCAGTTGGGTGGTTTAGAT
GGGCCAAGCCCACTAATTCAGCCTTTTTAATTATCATTTTTTTGTCATTCTGGTCGGCTA
CATGGGCCTGGCCCATTATTTCAGCTTTTTTTCGGTTGTGGCCTTTCTGGCCCAATGGTT
CCAATTTTCTTTAAAGATGGGTCCAATACTCAAATGGGTCCTGTTTGTCAGGTTCTAGTA
TGAGGATTCATGTTTTCAGTTCACCAATAAATAATGACACATAATATAGGCTTTATAAAT
GACACGTAATACAAGTTGTACTTTACAAGCTCTACAAGTGTAATAACTGATACAAGCTCT
ACAAGTATGGGAATCACGATTACAAACTCTACAAGTGTTTTCTACTTCAGCATGGAGCTC
CTTCGATAGCGATCAAATGCCGGAGTCACTGGAGGGCCATAGTCAAGACTGTGCCTTCCA
CGATCATCCTATTACATAGTCAGCTAAGAAGAATTAGAAAATTTGGAGGCAACATATTAT
GAACGTTCCTTTGCAAAAAAAATATCCTAGACATGTTACGGCCAGCCATCAAGGAAAAGC
AATAAACAAAAAGAAGAGTGTATCAACACGTTTCCACGGATGGATGGGATTGGCTAATGT
ACTACTTCTCTTAAATGTGCTTGATGTAGTATTTAGAAAGGAGATTTACTAGCAATCCAT
ACGCAGGGAATCTGCATGCGTATTTGTGCAGGATTCGGTCACAATACGAAATACATGTGT
ACAAGTGAACGTGATATTTAATTATTATTTTCCATAAACAATAGAGTTAATTTGAACCAC
CCTACATTTTTTTAATGCGAACTATAAAAATAAAGACTTTTTGGACAAGAAAAAAGATAA
TTCTTTGATTTAATATGTATAATAATTTTGAAGTACATAATTTATATACTAAGGATTTTC
CACAATATTTCCTAGATTCCATAATGACCTATGGAAACCCTTTTGTATTGGTTTTTTCAA
ATAGCATATATAAACAACATTCTATTCTCAACCCTACAACATTAGATATTTTTTAACCAT
TCTGAAAGGTATATAGCTAGCAAACTATCTACTAGACATCATCCACACTTGAACCATAAC
ACGTCAAGCAGGGATAACATGTTGAGCAGGGATAACATGTCCAGGAAGGCCATCCAATGG
TTTCAGCCACATCCTAATAAACCAGTGGCACTCTAATACTACTAATTACCAGCAGCAAAT
CAAATAGCCACATGAAGCACCAACACTTGATCATCAGCGCAATAGTCCGCAAGGACTCAA
CCAAGATGCAAAAAGCATCAAAATCCTAACTAACCCATGAAATATAACCTGGTTGTAGCA
CAGCAAAGGGAGGAGCTCACAATAGTGGTTTGTGTAGCTCATGTCCAACATCCTTTATGC
ATCGCTTGCAAGCACGATGCACCTTGGAATTGAAACACACAAAAGATCAATTATGTGCCC
CAGTGTATAGAACTACAACATGAATAAAACTGGAATACAAAAGACAGGACAAACCTCTCA
AATCTGAGAAGCTTCGCAAGACGGTTCCTGTTTGTTGCATCTTCAATGATTCCCAGCTTA
ACTGATTTGCCAAACTCATTTCAGAACTTGCCAGCATCTGCACATTACATAACAAAATGT
TTAGGAACAAAATAAAAGTAAATCTAATAGCAAAGTATCAAAACAACAAAGTATTAAAAA
CTGCAGTAATTTAGTTGACAGGTACACAATACCATGGTTTTAATTTAACAGAGTTTTTTA
GAGTATTCAAAATACAGAGTAAGTGTTTGGCAATGTAGTAAAATTTGTTGACTAGCCCGA
GGCAACCGCAACTATCTAGCCGATGTGACAGCAATGCAAACACGAGCATCTAACTCAATA
GATAAGCTACAGAAGCCTGCCAGTAATTTTCCATCGAAGACAGCCATGATGAGCTAGCAT
GCATGTAGTAGTACCGTGGCAAGTAGGTGAATGAGATTATGAGATATGCATGCATGTGTG
GCAGTACTGGACTACTAGAGGTACACACATTGTTATTTCCAGGGCAGTTGCTAGGCTAGC
CCAGCACTATATTAGTTCCCATGATGAAATCTCTCTCTGCACACGAGGAACAGAGGAACC
GATCGATCGGTCACGAACATAGCCACAACAGCTAGTTTGTACCACCACCACGCTGCAAGC
GAAGCTTCCACGCGCAAATTATAATCCAAGATGGTGGTGTCATCACCGGCATAGCCCCTG
TCACATCAGCACAACACATGGGCGGCATCACTTGACAGGTCCACGGGGCCATGCACACAC
ACCGAACTGAGTTGTGGACTAGTCATCGCTGTTACAAGCAGCAGGTAGGTTTATAATGAC
CATCAACTATAATTAACAAGAAAAATAGGCGGCCGGATCCGGTGGTGAAGGGGAGACTAG
ATCTCACGAATGACAAGCTCTACGGCGTGCGACGATTTCACCTGCTCAACAGAAACCAAG
AAACGGTCAAGAACGCAATCCAGAGATTCCAAGAACCTTAAGAAACAGCAAAACGCCGCA
AACGCGAGATACGAGCCATCACCTGCGCCTCCTCCGGCTTCTTCTTCCTGTCCGCGCCCT
CGGCCGACGGTCCACCCGCCTCCTTGACGGTCGTCTGCTCCCGTACCAGCTGCTTGAACA
CCGCCCTGCTGTCGAACGCCCCGACTCCGGTGGCCGCGGCGTCGGGGCCGTCGGGGCTGC
TTCTGGAGGAGCTCGGAGATGAAGGCTCCGAAAAAGGAACTGGGCATGGGGAAGTGAGTT
CTTGCCCGTCTGGTCGACCCCCACAGCCGCAGCGAAGCAGGACCCTCCCGCCTGCCCGCG
GTTCCGCTCTTCCTGGGGCCGCCCGAGGGGCGCTGCAAGGGGTAGGGGCGACGGCGAGGA
GGGGGAGGAGGCATCGACCGCCACGTCGCTCGGGGTGGCGAAGGTGGCGGCGGAGGAGGA
GGAGTCGCGGGGATCGAGATCTGAGGGAGGGAGATGGGGATCGAGGGGAGGGTAGGGCAC
CGTCGGGGGGAAGAATGCGATGGAAGGTTAGGGTTTGGGTAGGTGGCTGTGGGTAGATGG
ATAGATGGATGGATGGATGTGGGATGAAGAGTTGGATGGATGGATGGACGACATGTCATC
GATCTGTGTAACAACGAAATCCACCAATGAGAATAGAACATATATAATTGTTTCTTTTCT
TCTACTTTTTCACATGAATAATCCAAAAAAATGATCACATATTGTGCACAAGGGTGCATT
TTGAAATTTTAAACAATGTTGCCTAAGAAAGTTTTTATTTTCTTTGGACGAAAAATTCAT
TTTTCATTTCTCGAGTGCCCAAAATGAGTTTTTTTCATGAACGACATGCCATATATTTGT
TGCAAAATTAGACCAAATCAATTTTCGAAAATATTAGGCCACATTTAATGTACAATTCAC
CAAATGGTTGGGTGTCAAAAGGTTTTATGCACCTCTCGTGAAAAAGACAAATGTTCGTCG
AATCACCTCGAAGCGGGTCAAA
