Map Locations of contig_77756 (3634 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_77756

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77890 12 1534 bp MLOC_77890.4 Available Available None
MLOC_77889 4 817 bp MLOC_77889.4 Available Available None





CDS Structure of MLOC_77890






CDS Structure of MLOC_77889






Contig Sequence (3634 bp)

>contig_77756 3634 assembly3_WGSMorex_rbca.fasta
AAAAGAAAAAAAAAGAAAAAAGTGAAGAAAGAGAAAAAGGAAAAGAAAANNNNNAGAAAA
AAAGGAAGAAGGAAAAAAACATAAGAAAAGAGAGTAAAACACTCCATCCGTTTGAGTTCG
CACATGTCGTAGTCTTGTGACTTTATGGAAGGTGTTTGTGCAGTTGTTTTATCTTCTTTC
AGTAAAAGGTTAGAAATAATTGTGTAGGTGTGTTTCCCTGATAGTTGTGTTACATATTTG
GATATGAACAAGGCACACGTAGCTCCCAGCAAAAGGATAAAGGAAAACAAAAAATAAATA
AGGGAAAAATATAAATCCATTATGTGAGTTTTGTGTGGCATCTTTATGAAAGATGGCTGT
ATGATTCATTTTTTTTAGAAAAAGAGAGAAATATTGATTGACTAGGATTAGTTTCCTGAT
AGTTGTATCACTGATATAGAGAGGGAGGAGTGCAAGGGCAGGTCTAAACTCCCCTTTTGT
GCTGGATTGAAAATTTAGAGTGGGGGAAATACAGGGGCATGTCTGAAGGGATAGCTCTGC
TTTGTGATGGATTATTGAACTCAGCACCCTGCACTGTGGTATAGTGGGGTTAATACAGGT
ATGTGCTAGTTACAATTTTCAAAGCTCCAGTAAGATGGAATGAAAAATATATGAAATAAA
TGACAGTACCTTATTGTGTAGATAAATCTCCTAGGAAGAGAAGTGTTGGCCCAAGCTTTG
TTTGGTTCAAGCAGTACTGCAACAGTCACATGAATATGTAGTATCCATGAATGCAGGTTC
ATTGTTCCAAGCACTTCTGCTCTGATGCAAGAATTATTCTTGATCTGTAAGGTTCACACC
TATGAATCGTGATTATACTTAGATATTGATTTATCAGGGAAATCCTTCCCCTTGTGGTAT
CCTTAATGTCTTGGTTGCTTTCTGTTGTTTCTCAGCTGCAGTGAACCAAACTCTTCTTCA
CCTTAGACTAGTTGACTCATCAACCAGGAACTGCTGTGCTGAATAGCCAATCGGGCCAAT
CCCGTTCACTTTCACACGGTACGTTGTGTGTTGTAGTCTGATAATATTTTGTTCACTTTA
ATATCAGGTTGCACTGTATCTACCTTGGCGAAATGGTGTGGAATACTTACAATTTTACTT
GGTACATCTGTCAGCAGATGTAACATGGAAGGTACTGGGAAATGATTGACGTTTTCTTCA
CAAAGGAAAATGATGGCCATCTGGCTTCAGTGCCACAGTTACTCTGGAAGTCCGATTCTT
CAGTGTTCTTGCAGCACACACAAAAAGGAAAAGAAAAAATAAAAAGGAAGAAAATAGAAA
AGGAAGAGGAAAAATGAAAAACGAAGAAAAAATTGTAGAAGAAAACACTCCATGAGTCAC
AGTTTGCATGCTGGACAGAGAAGTGCAGAGGTCAAAGAGGACTGGTAATTGCCCCCTCCC
TCCTCCACCAAACCCCAGACCGAATCATCATGTCATGGTGGTGTCGAGTGAGGTCAAGAG
GCGCCGGTGATGAGCGATGGTGGCGAAGGAGGGCGTGTGAGGGATAACAATGATGTTGGC
TACCTCTCATGGAGGGCGCGGCAAGGACTGTGGAGGAGCATAATGGCATCCCTAGTTTGA
TTGGAGCGTTCTCTCTGTTTGACATGCCACGCTCTGGTCAGTATATGCATCAGTTTCTGT
ACTCTCATATTCACATTGCTGTTTAGGAATTTAATTGGCAGCTCGCTGTTCTGAGTCTAG
TTGTTTTGGTTATCTGCACAATTTCCTTGTGTGTTTTGAGTTGTTCTTACTGTTCAAATT
TAACAAATACCCCCCCCCCTTCCCATAATATAAGAGCAATTTTGACACTACACTAGTACC
AAAAGCGCTCTTAGAAGGAGTACTTACTTGTTTGTATCCATCTCCAACTCCACCAGTTTC
ATTTGCATTTTCCTGATGCCACACTGGGGATGGATAGTCATTTTTTTTCTCTTACCACAT
AACCTTAATAATGTGTGTTTTGATGTATCATGCAGGGCCTCTGCCAACTTGTAAACTCTT
CAATACTTGAAGAGCTCTCGGCATTCACCCACTGTGCGAGCGCCGTGGCCTTGGGTGGTA
TCTCCTCCATGTACAAAATACGGTATGTATATGTAAGAACACACATTTACCCTTTGTAAA
ATTAATAGATATGCTATATTCCTTGCCTTTTCCTGTACCCACATGTCAAATCCTTTTGGT
TTACTTTCAAGAACTATTACTGCATAATCTGAAATTTTGCCTGTTATGTCTCAATCTACT
TTGCAGGGATCTGCCTTGGAGCTAGTTGTACTATCATAGCTTTGGAGAAACTCTCTCCCT
TCTCACAAAAGAAGAAGAAAAATAAAAAAAAATGTGAAAAGAAAAAAAGAAAAAGGAAAA
AAAAAGAAAAAATGAAAAAAAAGTGAAGGGAATGAAAAGTAAAAAAAGAAGAGGAAAATC
TCCATTCATTCACCATTCGAACATGTGGTGTATCAACGGTGGTTGTTTCAGTTTATTTCA
CGAAAAGGTATCACTAGTGACATCTTGGTTTCCTAATTTGTATCCCACCTACCTCGGAGT
TTGCGTGATAGTTGTGTTACAAAATTGAAAATCAAGAGACACTAATAACTCCCAGGTAAG
TGTGATAAAATTCGGAAATTAAGATGTCACTAGTACCTCCCATCAAAATAAAGGAGGCAA
AAGGGAAAACAAATCTTCATCCATTATGTCGGTTTTGTGTGGTATCTATATGAAAGGTGG
TTGCATAATTGTCAGAGAATATTGATGGACTAGGATAGGTTGCCTGATTGTCGTGTCACA
AATTTAGAGAGGGGGGAATGCAGGAGCAAATCTCAAGGTCTAGCTCCCCTTTGTGTTGGA
TTGATGAAGTGTGCACCCTACAGCATATTATATTGGAGTTGGAGTTGATACAGGTATGTG
CTAGTTACAAATTGCAAAGCTCCATTCACACACATTACTGAATTTTATTGGTGATTAACA
CTACCTTATTTTGTAGATCAATCTCCTTGGAAGATGAAGGTTAGCACAAGCTTTGTTTGG
TTCAAGCAGTCTTCTGCCACTGAAACAACCACATGAGAAAGTAGCGGTTTCATTTGTTCC
AAGCACTTCTGTGCTAATGCAGAATTATTCTTGAACTGCAAGGTGCACACCAGTGATTAT
ACTTGGATATTAGTTTATTTTGCAAATCCCTTGTAACATTCTTAATGACTTGATTTATAT
TTTTCCTGTACTGCAGTGAAAGAAACCTACCTTAAGTCCTTAACCAGGAATTGCTGTGGT
GAATATGCAATCAGGCCAATCCCTTTCACACTTATATGGTGCGTGAATTTCGTTTATTTT
TGTGTCATACTGCAACAAGAATTTACCCTGGAGAATGGTGACAAGTACTTACAATTTCTC
TTGCCACCTTTATCATCAGATGTAGGTTAGAAGATACTGGAGAAATGGTGGGCAGTTTCT
TCACAAAAGGAAAACACTGCTCATCTGGTTTGACATCTTCAGTCTTCACTGCTCGTAGTT
ATACCGAAAACTCTGTTCTGCTGCACTCTTGCAGCACGCATAAGGAAGGGGGGGGGGGGG
GTTTAAAAGAAAAAGGGAAAAAAATAAAAACATC