Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
![](/morexGenes/blast_net_images/contig_77655_assembly3_WGSMorex_rbca.fasta-MorexXBarke_maploc.png) |
![](/morexGenes/blast_net_images/contig_77655_assembly3_WGSMorex_rbca.fasta-OregonWolfe_maploc.png) |
No map location |
Predicted Genes from contig_77655
Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
---|
MLOC_77862 |
1 |
154 bp |
AK366344 |
Not available |
Available |
None |
CDS Structure of MLOC_77862
Contig Sequence (2794 bp)
>contig_77655 2794 assembly3_WGSMorex_rbca.fasta
AGTTGCAAAACAAAAATAGTAATTAGATAATGCTGGGCTAACATTTTACCTTGCCATGGT
TCTTCNNNNNNNCAAGGAACTCAAAAATATCAGCATGCCAGGGCTCTAGGTATACAACAA
AGGCAGCTGATTTTTGAAACAATGAATGGATTTCAGAAGACCATGGGATTAGAATTTACA
AGGGGGGGGGGAATGATTTTTGAAACAATGAATGGAACTCAAAAATAACCCCATGCATCA
CAGTTCCTAATCAAGCATAGTCCAAGAAACCTAGAAATTATCATATTGATAAAGATATCA
GTAAAGAAATCTGAGTAGCCTCAAACGCAAAGCCGAGGCAATGAAAAACACAAAAGGAAT
GGCAAGGGAAATTGAGTCGAAGAATGTCATCAGCCAAAAGGAATCAAAAAGCAAATCTCG
CTTCTGGCCTTGCTGAAAATCCATGACAAAATGATTAAAACTGGGACACCATTGATGAGG
GTAGTAATGGCAACAGAAGAAGTTTAAGAAAACACAAACCTTCTCCTGCTCCAGCACAAT
CCATGTCTCAAAACAAAACGAGAACATTCAGGATGCAATAGCCAAAACGAAATTGTTGAA
CCATGTACAACCAGGGCCACTAAAACTCTTCAAGACACCCACTGAAGCTGAAGCATCCAG
TAAAATATTTAAGCACTCTGCGGTCCTCTATGAATTTTGGTAAACAAATGTAGTACCGAT
TGGAACGATAAAATAGATTCTCATTTAACACAATATCAATAGGCAGAGAGAAGAATCAAG
TTAACTGATGAACCTGAAATCCTTGGGATGAACGACAGAAAATCATAACATATTATCAAA
CGAAAGTAGCACAGACCAAATAATGGAACAGAAATCTACGCAAAGCAGAATATATAAATA
ATTAATTATACCTATTTAAAGAAGCACTGAATTATACCAAGTTATAATGTCCATGGTAGT
ATGACCTATTCTATGTATTATCAAAATTCTCACATGACACTTTCTTCTAAGTTTTGAACT
TTGTATACCATTGTACAAATCATATTTGTTGGAAGAACATCTTAAAGGAGAATGGATGAG
TAACAAACATAGTGCTAAAGCGCCACGTGTAATTATAAATAGGTTACTTATACAGTGATT
ATATAGCTCATTCCAAAGGCTTTTGTGAGGTGCGACATAACATAAATGAAGAAATCTAAC
TTTAATATGGACCCTTGATCAGTAGAAACATAACTCCAATATGGAATTAGTCAGTCTAAT
ATTTCTAGTCTCACACTGCAACTAAGACTTTAGAAGGGGTGTATGCAAACAGTGAAACTA
AGAGAAGATGGAGTCGTTCCAAACAGCAACAGAAGCAGCCAGGTCTTGGCCAGGACGAGC
TCGCAACATTATCTCTAGAGGCGCGAACGGAGCACTTGGCCAGGACTCCCTATGAAGTGA
AGCAGGACTGCATTTGAAAAAAACAAGAAGTACCTTTCACCAAGAGCAAGAAATTGCCAC
AAACAGGCGGCTGTATCTAACTCAGCGCATTTCAGAGCAACCTGCCAAATTGACTTGTGT
AGCATGTAGTGAGATACACCTGAACATCTGGAATCATACCAAGATACCTAAAATTCCATT
AAGGGAACACACACAACGAAAGTAACAGCAAGTACTAAATGGCAAGCTGAATCAGTGACT
TCTTCCAAATGGAAAGATAATACCATCTAGCATCCAAGGGAATGATACCGAAATGGGAAA
GGATACAGTGAGGGTTTCAAGTATTAGGCCCAGATCCTCTGCAGAAAACTAAGAGGAACC
CTCGAGTTGGTTGATAAGGGAAGTTCTGCTCTCCAAAACCTATCAAAATCAGTAGAAAGT
TAGCCAATACCATCGATTATGTGTCATACCCATCAAACTTTAACCTTCAAATTGCCGTGC
TGAAAAATGAAATGTGTGGAATCAGATGGAAAATAAACCGCTAGCCAAATCCCACCAACT
CGACACAAAGATGAAGCATCACGGGTACCAAATCCCACCAAAGAACGCCGGCTTCCGAGA
CTCCAATTAGCAAGTCCAAGCGCGGCCGCGGAACCTCCAACCAGACTAAAACCCTAGAGG
GGGCGTGGAAATGGACGGCGCGGCGACTGCGAGGTCTATGAAAGAGACGCGTGGGGCTGA
GATACAACGCACCTCGGAGGCTCTAATGGTTTTCATGAGGTCGACCAGCTCGCTTCTCCC
ACTGTCCACCGAGCGGGTGCTCCAGCTTGAACGAAGGTCGACGCGGAATCGATCGAGAAC
CCAAGCCTCGATCACCGCGGCGATCTCCTTCAGATCTAGGGCATGAGCAGGTCGGAACAA
ATCTGAGGGGCCCTGCGGCACGGGGAGGAGATACCTAGGGTTTGTAGGGAGCGGGAGGGG
AGCTTACGTTGGAGGGTGGAGGGGGCCGGCGCCGCCGCCGCGACGGTGGGGGGAGGGGCT
GCCTGAGGCTCGCCCATCCGCACGTCCTCTGTCATCCCGGCGGCAGGGGGAGTGCGGAGT
ACCGTTGGTGCCGAAGTCTTGGGTGCGGGAGCGAGAGGAGGGAGGTACCCGATGCCGTCT
AGGAGCACGTGCGACGAGGCTTGCCGCCGACGAGGCGCCCGCCGCTGGGAGGAAGAGCGG
GAGAAGGGGAGGGATACGGGCACAGGGGCCGCGCGGGGACTGGCATGGGGATTTCAGCAG
GGGTGATAGCAATGGCGCATCTCCATGGGTGCGCCATTAGTAATCTTTTTTTATAGCAAT
GGCGCATCACAGGTGGTGCGCCATTAGTAGTTTT