Contig Data
morexGenes
Links



Map Locations of contig_77534 (4261 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_77534

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77844 2 1172 bp MLOC_77844.1 Available Available LOC_Os05g48310.2, FRAME:+1, EVALUE:3e-21, 13105.m05133 protein 60S ribosomal protein L35a-3, putative, expressed





CDS Structure of MLOC_77844






Contig Sequence (4261 bp)

>contig_77534 4261 assembly3_WGSMorex_rbca.fasta
ACCACCTTCCGCTGCATCTGGGGCAAGGTCACGCGCCCCCACGGCAACTCCGGCGTCGTC
CGCGCGCAGTTCCGGTCCAACCTCCCCGCTACCTCCATGGTACAAGTCCCTCCCTCGCTT
GCTCCTTCGCACATCATCGTGGTCTACCGTGCGTTTTGCTGATGTATTTCTTGTTGGGTG
GTTCTTGTTCTGCAGGGCAAGAAGGTCCGCGTCTTCATGTACCCCAGCAGCACCTAAGGT
AGAATGGATTGTTGAACAGTAATTCTCCAGTGGTTTATGCTCGTATATAGTGTGTTTGTT
TCAGTGATAGTGTCACGTTTCAGCTCATTGTGTTAGGAGTTCAGGAATGAGTGCAGTTGT
GTCTAGATGATTCAGGTATCCAACGACCATGGCCTAATTTTGGGCTCATAAGTGTTGAAA
TGGTTTCATATTAGACCAGTCATACGTTTTGATTGTGTTATGCTCATACGAGGGCCCCAT
GCCATTTGGGGGAAGCTCTTTCAGTAGCTTCGAAATACCTGCAGGTTCTCTGCGGGGTGC
TCGGAAGTTGGGGCCCTAGATCAAATGCAGTGGTCTCATAGTACGAGGATGCGCTGTGGT
CGATGAGTTTCTCGCCGACCAGTTTCTCGCAGCCTTGCCTCCAATGACCCCAATATTTGT
TAAATCATATACGCATTCACGTTTGTATTATCATTTGTTCCAGTCTATGTTGTGTTTGAT
TTAGGTAGCTCTTGGCGGTCTATTACTCTCTTGAGGAAATGAGGATTTGATGAGTTTTGG
GAGTGAAATAATTGTATTGGTTGCCATACCTGTGTTTCCAGTTTGGTCAATAGGCAACCA
CCTAATATAACATATGCCGAGCTGTTTTATGGTTGGATCTGTAATTCAAGTGCACGTTAA
GGGCCCCATGCCAATTGAGGGAAGGTCTTTTTGCTAGCTTCGAAATACCTGCAGGTTCTC
TGTGGGGTGCTCGGAAGTTGGGGCCCAATATAAAAGTGCAGAGGTCTCATAGTACGAGGA
TGTGCTTTGATTGATGAGTTAATCATCGATCAATTCTTCACAGCCTTGCCTCCAATGACC
TCCATATTTGTTATTGCTCATTAGTCTATCGCTCGTGCAGGAATATTGATTTGTCTGCTG
TAAACATAAACACACTTGTGCTGTTTCAGATATTTCAGATGTTCTATTCCTCACATTGGA
TTGCATGATGTTTTCCATAAGTTTGAAATCCAGAAACCTTTGCATCATTGCCTTAACATT
CTGTATTTAAGTGTGTTTATGTTTACTTGTTACCCATGATTTCTGTTTTAATGATATCAT
GATGTAGTCTCTTTTCCTGAAAGTTGTGATCCTTGTTTCAAGCATCACAAGCCCAGAAAT
GTTAACTCACAAGTGCTTCTCTTTCTCTTGGCAGGGTATGTTCCTATTCTATTTAGTTGT
AGCTGGATTCGTGGATGTCTGATATCAGTTTTGACAGCCAGTTGATAAACTCAAAGATTT
TCCTGGCGATTTTGGAAGACCTTAGTTACAGACTGTTACTTTCATCTCGTGTAACTTGAC
TTGGTCACTCATTTTGCTCTGAAATGAAGCATGGTGTGTTTTACTGTTTCTATGGAGGAT
CCATTATAGTGCCGAAATAGCTACCTTTTGCGCTAGCAGAGCGTCGGCTTCAATGTTTGT
TGCAAAATTTTGCACGCGCCAAAAAACAAACATCATTTGACACTCAAACAAAATCAAGAA
GATTGAACACATAAAAAATAAATTAACACAAAATAGTTCAATTTCATTACAATTCAAATA
AATAGTTTATCTTTCAATACAACAAATAGTTCAACAATAGAACATCAAACATTCAAATCA
CTAGTTTTGTTTTCCATTCCATGTAGGGATGAAAACGGAGCGGAAAGAAATTTAAAACCC
AGAAATTTAAAACCCCTTGATTCGTGTAGAAATAAACATAAAACCAAAAATGTAATGAAA
TGTTATCATGGCTAAAAATTGTATGATTATGTTGACACCTTAGCATAGTATAGTAGTAGC
AGAGGGTCTAGTTGAGTACGTATGTGGTAATTGGGCCTCAAATGATCCATTATTATCATT
GTGTCATCATGCTAAGATCCACGTTGATGCCGGTGTAAGGAGGGGAAGAGGAGGATCAGC
GGCGGCCATCTGTCCGGATAGACAAGGAAACTAACTTGTGATCGCAGGTATGGAAGACCC
AAAGATACTTGAGACCATTGCTTGTCGAGAGGCCTTGGCTTTAGCAGAAGATCTCAACCT
AACACATGTGATCATAGCCTCCAACTCCAAACAAGCAATTGCCGATATAAAGAACGGTGC
AAGAGGTTGGAATGGATCCATAGTTCATGAAATTTCTCTTAGAGCTACTCTTTTTCGTTG
TAATTTTTGCTTTGAAGGTCGTGATGCGAACACTGAAGCACACAACCTAGCTAAGTTCTC
TCTTAGTAGGGGCCCGGGGCGCCATGTCTCGTTAGGTCAACCCCATGACCTGATTTGTAT
CCCACCAGTTGTGGTTTTTGATGAATAAAGTTGGTCTTATCCCTAAAAAAATGTTAGCTA
GGCTACAAAGCAAACATAGGCCTATACAAAAATGGAAAAAATGGAAATTTCATATTGACG
GAAACGGAAAGTTTCGTTTCCACCTCTATTCCACCGGAACACACTGTTCCATTTTTGTTT
CCGTTTCCACACAATATATTCCATTTCCATTTTCGTTTTGCAAATTTCCATTTCCATTTT
CATATTTCCTCTTCATTTACATTTTTTCTCCGGAAAAGGGGAAAGTTTCCACTCCATTTT
CATCCCTAATTCCATGTCCATCACTCCTTGATTAGATTCGTCTAAAGATTATCATGCTGA
CATGATAGCAGACAACAAATCGAGACACCCTCTCAAACATCCAGCCAATCTAAATCTTGC
TCATGCTTGTTCTTGATGATCATGTTATGCATGATTGCACAAGCATTTATGATGTATCAA
AGGATCTTTTGATCTCAAAATCTAACCGTTCCTCTCATAATAGTAAATTGGGCTTGTAGA
ATCCCAAAAGCTCGAGCATTGTAAAAATCATGATTTTTCTTACCTTCTGATTTTTTCAAC
GGCTTCACAAATGTTTGCCACTTTGGATAGATGTCATCCGGAAGATAGTAGTCATAGTTG
TATGTATGACCATTTGCCTTTTCAACAGCTTCACAAATGTTTGCCACTTAGGATAGATGT
CATACGGAAGATAGTAGTCATAGTTGTATGTATGACGATTTGCCACAAACTGCACTCGTG
GCAGTTCGTGATTTGCAATCCTATTCATGAGTGGTGGCCGATTAAGAACGTTGATGTCAT
TCAAAGATCTAGTCATTCCAAAAAAAAGTATGCCAAATCCAAGACTCTTGATTCGGCCAG
TGCTTCAAGAATTACAGTGGAACCCTTTTTCTGGCTGTGAAATTGTCCATGCCATGCCTT
AGGTCAGCTCTTCCGACTCCAATGCATCAATCTATCGAGTCAAGCATACGGGAGAACCCG
CGAGCTTTGTTCATGTCCAAAAGTCTTGCGGTGTCTTCAATATTGGGAGCTCTCAAATAC
TCTGGACCAAACACTTGCACAATTCCAACTGCGAAACGCTTGACGCACATGATGGCTTGA
CTCTTACACATGTCCAAGTGGTCAACAACTAGATGAGTCAGAATACCGTATGCCAAGCGG
CTGTCACTTTTTGAAAGGTGCTATGCCCGAGTTCTGTGACGCCATTCCTCCTTTGTTAAA
AAATTTGATTATGGCTCTTCAGTTTCTCTGCAATGTGTTCGAACAACTCGGTGCTCATCC
TAAAATAGCGCCGAAAGTAGGACTCGGGGTATACGAGATTATCCACAAAATAGTGTCTCA
TCAATGTGTCATCGACTTCGATCTTATCCTTCCAAATTTTTTGACGACCCATAACTGAAC
CACCATGCTTCGACTTTTTATTGACGTGCATAGGTAGGATCTTTGCAAGGTCCTCTTCCT
CTTGAATATCAAATTCTTCGTCGAAAGAATCATATGACGAACTCATCTACATATTGAATT
TAATCTAGTCTATAAAAGTAGAAACAACATGCACCAAATTTTTCTACAACTATTTGAAGG
GAACCAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNCATTGGAAGATCAAGACATGGTGTGCGAAGCATAGTTGGATG
A