morexGenes - Barley RNA-seq Database

Contig contig_7732
Source Contig contig_7732
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_7732 (6931 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_7732

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77800	14	5653 bp	AK361249	Available	Available	None
CDS Structure of MLOC_77800

Contig Sequence (6931 bp)

>contig_7732 6931 assembly3_WGSMorex_rbca.fasta
ATACATGTTACTAGTTTAAGTTACTCTAGGTCTGTCCTTGTTAACATTTGTGTTGTGCTA
AATTAATTAGTACTCTGTCCATCGAAAATGTTTTTTCTAAAGTCAAACTTCTCTAGGTTT
AACCGAGTTAATTGAGAAATATATGAATGTCTACGTGCCATACCAAGTGTCAGTATCAAT
TAATTTATCATGAATTGCACCAAAAAATGTTGCACCGACAACTATATATTTAGGCTCTCC
GCGTGTTCAAGGAATAACACTGGCTCTTCGCCAGCTGCTCATCACGATCTCTGGTTGTAT
TGTCTTGAGATAACAATTGCAATCGTCCATGCTAGTTTTTATTAACAAAGAAATGGTCTT
CATTGTTGTTAATAAAATGTTAGGTAGAGCATTTTTTCTCAAAAGTCAAAAGTAGGTTAG
ACAGAAAGATGAATACACATTTAATTGATAAATTTTTACCTGCAGCGTGGATTACGTGCA
AGATGTCGTACTGTCTTAATATATAAATTGCAATTGTGCGTGCTGCTTTTTCTTAACAAA
AGAAATGGTCTCTACAATTTTGGTTAATAAAAATGCTAGGTAGAGCATGTTCTTCTTCTC
AAAAGTCAAAACTAGGTTGGTATGTACACCAAAATTCCCAAGAACTTCTTTCAACAGAGC
GACCTCAGAGTAAACACAAAGCCATGCTTGGTTACCTAATGCTCCTTTTTTTTTGGTCAT
TATATATTTTCTGAGCCAGAGTTGTCTTCCCAACCCCTCCTGTTCCAGTGATGCCAGCCT
TGTACGCCTTCTTTTCCTTTTGTCGGAGCACCAGTTCAACCAATCTTGTGCAAGCACGTA
AAGTTTCCTTTCCCACAAGACTAGGCTCCACAAGGTGGCAAGTTCTCATCTGCTTCACCA
GTTCAGCTTCAGTTTTATGCTGCAAACTCTGGAGCTTTAAAAAACTTGCCCCTAACTCTG
AAATCTTCTCAAGTTCTCCATTAAAATCTCTGATTTTTATGGCAATCTCATGACTCTTCT
TACAATTGGGAATGCATGTGAAAAGTGAAATTCCACCACGTCTGGTTGCTTTTGTTGATG
AGGAATTATGTTCAGCTAGCAACTTGCCTCCTTCAAATCTCACCAAGTCGATAATGTCAT
CAGCATAATACATAGCATCTTTCAGCTCACCAAGCCAATTGTTGACTGCTGCCTCTTCAG
TCCTCCTTTCTTCATCATCATTGAGAAAGCATTGTATTTGAGGCATTGTTCGCTGCAGGT
CTCTAAGGCCTTTATTCACCCCTAGAATAAGAACTGCCTCTTCTGTAATTATTTCTTGCA
ATCTTTTGGCACATGGTGCAACAAGAGAACCCCAGTATGACTGTCATCGCCATCAGACAA
ACTTGATAAGGTTGATCCACCAATTTACAAAGCAACTTCTCTGGAAGTGTGACCAATTTG
CTGGCTGGCAATAAATGACAACATGTGTTAATATGGTTCAAAAGGTAGACCATGTTCACT
AGATTCATATCCTTGAAACAGAAATTCAGAGATAATGCCATCGGTTTGCTCTTTAAATGT
TGAATAAAATAATCTACTGGAGACTGGAATTTCGGAACCTGAATAATGGCTATACAGAAG
TTCAGAATAACAGGACCAGCCAATTAGTTTTGCTTACGTACTGGGTAGTAGAGTAACTAT
GAACGTTATATAAATCATGCGTAATACAAATACACTAGGTAATTTAATCATAAAACAATC
TAATCAACTCCACAGAAAAGGTGCAAGGAAAAAGATCCACATCCATGCTTGATAAATTCA
GCAGTAGCGGGTACTGTACTCGTTTTGCTACTTTAGCTTCAGTATTGAAGTATCAACTCT
TGATTTAGCATTCTGTCCTTCGGATCTGTATCATTTCTTTAATTCTTTTAGTCCCATAAG
TTACTATGATTCCTTCGGTATGTTTCATTACTAAACCTCAAGTAATACTCAGTTAGTTTA
GCCATGATGAGATTTCCAGCAGTTCAATCTTTGTCTGGTTATTCATCTTCTAGAAAAAAT
AACTGTAATTATTTGCCCACACGGTAGATTAGGAGTCACGATAACATATTTCATCGTAGT
AATACCATGGAAAGAAAGATGGAAGATATTACCTTTCAAACCAACCTTAAAGTAAGATAT
AAACAGTCAGTAACAACAGACGAATTAATGATCTCACGGAAGCAGATTGCTCCAGTAGTC
AACCAATCACCAGTTCAAGATCTCGATCAACCCATGACTGCTTAAGATCTTGATGGCCAA
ACCCAAGGGAGTTGGAAGGTAACCGGTTGACTAGACCGACATGTAGAAGAGATAGCAGAG
GATTTTCAGCAAATAACCAAAGGAAGCCGCACTGCAACACATGTAAAAGGGGGAAAAGCG
AAGGTGAAGTACATGCTTCCCTTGAACGAAAACCAGTTCAGCAAATACAACAAGAAGTAC
CACTAGACATAGCTATCTGAAGTAGAGAAAGCACCTGAATATGTTAAATTGATTAGACTG
CTGCGGCAGAGGAGGATGTGTTCATATGAGTTGTTCCCCGTAACAGGATATCTTTGCTAA
GCAGTCCAACAAACAATAAGAACAGGCGCACCGATAATGAAACATGTGCTGAGTCTGCGC
CATCAGCAGATTCATATAAGGTATGAGTTCAGAAAGGTCAAGATGAGAAGAAGGATGAAA
TATGTACTCTATTGACTGAAGGACACAGTCGAGCTTTACCAGATATCAGGAGAATGGATG
CAGAAGTGCAGTGTGAGCACGAGGAGAACGTTGAAAACTAAATGGTAAGCTGAAGGGTAG
TTCCTACTGAATCATCGTGTTCTTCCTCAGGAAAGGTAAGAAGCATCCTTTTCTTATATC
ACACCAACAGTGAGGGGAGCTTAAATAGCACAGTCTGCAAAGTGTGCTCTGTAGTAGTAG
TATTTTTAATGTAGGATGGCAATGGCTCTGATGTGATGTAAACACTAATAAGCAAGTCTG
CAGCTTCCTTATGGCACCAATGAATGATGATGCACAGAACCAGCAAGCAGTTAAGACTCT
GATCTGTTTACCTCATCAAGATTCTATCAGCAAATGTGAAACCTGGTGCATGTATCTGCT
CGAGATTTGTCTCCGGGAAACAATAGGCAAGTTGCACAATTAAAAAAAATCCTGGGATTA
CATGGATTGATGTGATTTAAATATGCAAATGAGGACAACAGGCCACAAACTCCCTTCTGC
AGCATCCTAAGACAAATGCAACAAACTAGCAATGATCCATCATGATTAACAAAGTTGGTT
TTGTTTAGATGTCATGATTGCTTGTATACAGTTAATCAAAAGACCGACTCATTTGATTTG
TACATGTCCTACACATTAGTCAGAATTGAAGGCAGCTGTGACACACATGATGGTTAGTGT
ATGACTGGCGAGTAAGAAACATTTGCTACAATAAGTGAGCTAGTTTTTTTTCTTACAAAG
GCCGAGATCTGTTAAATCAAAGTAGGGTTACAATAATACTTATCAATGAGATGCAAAAAC
AAGTACATAAGCAGACAGAAGAACATAGCTTGTCAATTTTCTAAGATACAATGCACGGGT
CAAAACATGATCTCAACCAAACAAAATTATTATGCCTACTCTGAGATATTTGTTTCAGTT
GCATCATATGAACGGTACTCTTTTTTCCCTAGAGGCGTCATCCTTAGTCTACAGGGGTGC
ATGTCGAACTAAGAAACTATAAATTTGAATGCAGTTCCAAATAGGCTAAGGCTTATCAAT
ATTATTCAAGTAATACCAAGTAAACCATGCATAGTTTCTTATTATATATCATTGCAGGCC
CGCATCATCCTTCCGCCCAACGAGCTGTTTCAACCTGTACACTGGACGGCATTGCATACA
AAAATTCCACAACTGCTGTATGGTTCATGTACATCTAATCTCAGGTTTTACATGTATGGC
TCAATTTCAGTAGTACAAATGGACATTGTAGAACTTTCAACTAAAAAACAACATACCAGT
AGAGAAATTACATCTGGGAGAATCGCGATCTGTCGAGCAATTTGTTCCTGTAACATGGTG
GCTGGCACAGCTAGAAACCACACTCATCATCCTCGTGCAGGTCTGTCTTCACGGGAAAAT
CTGGCCCGATCATGAGATGGGGAGGGGACAAGGGAAGGACCAAAGACAAGAGGCATCCAT
ACATTGGTCTTCAACCATGCTGGTCTCAAAACAACTATGGCTTTCAAAATCTCGCTTTCA
TGTCAACCCAATCCATTTCTTGAAACGAAGTGCTGCTTCTCTCCTTATCAGTTGAGCTTC
TGTTTGCACCTTGGGGGCCTTACCTTTATACAATGTTCTATGATATTTAAGCCACAGGGA
CTTGTACTTGTATTTGTCTATAAACAGCTTGGAGCTTTCCATCAATTCTATAACTTCCAT
TGCTCGAAGGAAGAAACCACCTCTCACAAAGCAATACAGCAGAGAGTCCAACAGTTCCTG
ATCAAATTTCATTGAGTTGGAGTTGGCCAGAACTTTCATTTCGCCCCACAAATCTGTCAC
CTCCACATACTTGCCACCAACAGCAGCATAAGCAGTTACTAAAGAATGGAAAGTTTGTGC
GTTTGGCGTGTGGCCTAAAACACGCATCTTGCTCAGTGCTTTGTGAGCATCATGCATCAA
TCTCTTCTTGCAGAAGAAATGTATAACATTGTTCCAGTCATGAATGGCATGATTAACTGT
ATGGCCACTTTTGACTTCTTCCACTAGCTTAGCCGTCAAAGCAGCTTCATTGTTATCGCA
GCTTTGCACTAACATCTCAAACTCCCTGTTAACAGATTTTTTAATGTTTGAGCTCTTCAT
CTCTTTAAAAAGATGGAGAGCACCTGTGGTGTTATTGTGATGTGCCCTGGATTGTATCAA
ATCTTCGTAGCAGCTTGAATCAAGCTGGATTCCTGCCTGTTGAGCATCCTTCAAAAGTGC
AGTTATATCATCTTCATGATTGCCCTCTTTGCAGTAAGCTTTTAGAAGTGACGAATAAAT
GGAAGAACCAACTCTAACTCCAGAAAATCTCATCTCGTCAAGAAGGTCATGTGCTTGCTC
TAATAACCCAAGAGAAATGCATGCATTTATCACTTGTACAACAAAGGAGCTCTCAACAGA
CACAGGTGAATCCTCTTTGCTTGCTTTCACAAGAAATGATGCCAATGCACTGATCTTATC
TGCTTCCAAGAAAGTTTTGACTAGTTTGGCGTACGTAGTTTCAGTTGGATGCAGGACACC
ATGTTCAGATTTTACCAGTCCAACCTGTCCCTGCAGCTTATCTGATAATAGCTTGAGTAA
TTCTCTCGCCTCTAATTCAAGCCTTGCAAAGCTCTTATCTTTGAAGAATGAAGCATAATT
TAGCATTTGGTGGTCAGTAGACACAGGTTTATTCAGGAAACCTGAATTTTCAGGGTCCGC
TTTCTGACAAGGAAGATAAATCTTGTTAGATTCAACTGCCTCAAGAACTGCTTTAGCTGC
TTCTAGTGACCGCTTTGCGTTGTTACCCTTTTTAAGCATATCCAGTACCATATCCACAGC
AGAATCCAAATCCCCGAATTTCAAATGGCAGGAGAGCAGGCAATCATAGTACTGCCTGAA
CTCTGATTCACTGAGACCACAGGCCTCATCGACATGCCTCTTCAACTTGTGAATCTCATC
TTTGTGTCCATTCTTTTCATATATGCGAGCCATGACAACCAACAAGCTGGCTTCGGGTTT
CACCCCTATCCTGGGCATTAATTCGAGAAGCTGCTCCGCCTTTTTAGTAGTACCAAACAG
GAGGGATGCAGTCAGAACAATGTTGAAGGTAAATGAATTGGGCTTCATTGCTAGCAGCGG
ACGGTTGCTCTTCTTCCGTGGATCAACTCTATTGTTCTGGAAAAGGTATCCAATCTCCAT
TACCATGTCGGCAGCAAGAAATGAACCGGTCGCAGTCTGACACATGTGAGCTATAACTGC
AGACCAAGCCGCAACGGGCGGGTATGCTTCAATCTTCACCAGCTTCCTCACAACATTTAC
AGCAAGATCAGGAAGAGCGTAACGTGCAAGAACAAGGGACAGGTAAATCAGGGCCTCCTT
CTCCAGCAGTTCAGGCCTCTCCCGAAAAGTGTGATCAACCACACTGTATGACTGGTTAAG
CCTGTGAGCATCGCAGGTCGCCGCGAAGCCGGTGATGAGCTTGCTCAGAACCGACTTTCT
CGGGAGCCCGTCCATGTGAAGGTGCTTCTCATAGGCCCTCCAAGCATCATCGAACCTCTG
CTGGTCGATCGCGGCCTCTATCTCCGATGCTAGCAGAGACGGGTCCCGGGCTTGGACGAG
AACCGTTTCGGTGGTGGTGGAGAAGCAAGCGCCGCGACTAACAAGTTGCGATTTCTGGTT
CGAGAACCCGGCGATATCTTCGTCAACATTGCGCTTGGTAGTACCATCATGACAGTTGTG
TCCCAAGCTGTGAGAGCCAACACAGGGTCGTGGGCGGGCGAGGAGCGCGAATACGGCACG
GCCTGAATGCCGTCTTGCAGCACAGATTCTTGCAACACGAAGCATCTGCCTGCCTGCCTG
CCAGCCAAAGTGCCGCCGCTCTCACGCCCGCCGGCGCTCCCCTCCAATGGACAATGGACA
AATCAAACGGATGCGGTCTTGGTGAATACAGATTCAGCAAACGGCAGCAGTATAGCACTG
GAATTGTATTGGGGAAATCGGCTCCCAAGTTTGGAGATTTACCTAGGTTTGTTCAAGAAT
GGGAGTGGAGGCCAACACAGGCCGCAGCTGAGCTTCCTCCCCTCCCCGGCGGAGCAGAAA
GAGAGGTCGCGGCAGAGATGGGGGCGGGCGACGGTGGCAATGGAGGCGCCGCGCTGTTTC
TCGGCGTGTGGCGGGAGGGGAGGGGAGGGGG