Contig Data
morexGenes
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Map Locations of contig_77180 (4428 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_77180

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77777 4 1161 bp MLOC_77777.3 Available Available LOC_Os05g46480.2, FRAME:+2, EVALUE:4e-38, 13105.m04962 protein late embryogenesis abundant protein, group 3, putative, expressed





CDS Structure of MLOC_77777






Contig Sequence (4428 bp)

>contig_77180 4428 assembly3_WGSMorex_rbca.fasta
AATGTCGCGGACAAAACAAGATAGATATTCATGAAATAGTTTTATTCACACATATGGGCC
GTTATGTCAAAGTCTTCCATTGCCCCCCCCCCCCCCAACAAATACCTTGGGTAGTAAGGC
TAATGCCCCAAACCATACCTTACCGAACTACTCATACATGGTGACCGCGAGAAGAAAACA
TTGAGGAACACATCTTGAGATTGATGGATCGCAATATGTCTTACAATGGAAGCCTTGTGC
GATGCATGGTTAGAAGTATGAACTAGATGCAAGATCACTACGTGGTGGAGATGGCTATGA
AGATGGAAATGGTGGCGACTAGGGTTTGTGGATGAAGATAATGATGAAGAGGTACTGGCT
TCTACGCTCATCGCTCGTCGTTCTGTCGACATTTCGATGGGCTCCCTTTTATAAAAGTTG
TTCAGGTAGAGAATCTGCCTCGAAATCCATGCCAAACATGCGCTCATACGGGTGCATAAG
TCCATATGGAACATCGTCTTTTGCCATGTGTTCGCACATACGCTTTCTATTGATTATTTC
TTCCTCCATTTTCCTTCCTTTCCATTTCCACATGTGATTTCTTCCCCTTTTTAGCCCATT
TCCTGTGGAAACACATCAAAGAGAGGATTTGTGAAATCATTTGCATTCATTAGTTATCAG
TAACAATATCAGAGCAAATATCTTTTTAAATGAAATATCTCAGTTTAAATAAAGGTGAAA
TGAGTGTAAAATTATCACTCATCAATGATATTCTTTCTTTTACTTTCATCCCATTTTCAT
GAAAATAAGCAGGATCTCTAACTCTCTATACCAGCCACTCTACTGTTTGCCTCCCCTTTT
CTGTTAATATAACTCTTTCATTACACAAATTTGGGCCAGTAAGGATGCAAGCTTTATCCG
AAATGAATGGACGTAAATCGTTTGTAGGTGGATTTTCAAGTCTGTCGTAAAATCTTAGGG
CACTTAATCGAATTAGAGCAATAGGGGGATATTCAATGGTAATAGCTTTTCTTTCTGTGT
TTCGCCCTAGTGACCATCGACAACTTGGGGTAAGCGAGAGGTCAACAAATCCTCCGATAG
AAATAGAAGTCATTGGATGAGTGGATTTGCAGCATCTCAACAATTAGAACAGAGAACTGG
GAATATTTTTGTATGATTAAGGCTCCTTTTATATAAACAACTCCAACCGCAAGCAAAATC
CTAACAGACATCGTCGTGAAAAGACTATTAACTTTCAGCCACGTACAGAGTTAGTGTATA
CATAACCATAGGAGAAGAAATAATTTCTTAGAAAGAAAATCACATTTTTTTTGAACAATG
ACTAACATAAGGTTGTTGCTCCTACGAGGATATAAGATAAACACTATTTTATCATTATAT
AAATCAGTTGTCGAACATGTTACATGCATCAGGAGTGTATAAGTTAGAAGTTACACAAAC
TACGAACTACATTGCACGAGCAGACTTACAATTAAAACATATGCTTAATGAATTCCCTCT
GGTGGAAAAATAAAAGACACTTATCATAATGTCAGTTCCGACGTGTAAGGTTGTCTATGA
TCAAAACTACTCCACAGTTTAAAAGACACAAGAATATTTTCAATCGAAGTAACACACTTA
TGACACCAAATCTTATCACCCATTCTTCCCACTCAACTCGACCATACCATGATTCTTGGA
GTTTTCTGGTATGTTAATTTCATCTACAATGGCTTTCAAAGTTGCATCTGCCTATCGCTA
TTTCTCCTTCAACATGCGCCAGTTTTTCATGTGCCAAACGGTCATCCGTTCTAGCTCATC
AAGCCACAACTTAGAAAATCAAGCTAACTATGTTCCCGCTCTCACAACATCGTAGCCCTT
TCGATCCAAATTAACTAACACAGTCTTTGTACAATACACAATTAAAATTATTATTTTTGT
GGGAAACAACTTGAATTAATTGACGCAAACTCTGTACAATTCGAATGGAGGTAGTGACAT
GAGAGAGAGAATGGGCATTTGGAGGCTGAGCTCCATGGTGGCCGAAATTTTTGAAAAATT
CAAAATTCAAACTTTTCGATTTTAAAAAAAAATCTGAAAATAAAATGCAAGCAAGGAAGG
ATGTTATGTTTTTTTGGCGAAATGGATGTTATGTGTATGTGTGTAAAATTTTAGGATGAA
ATACTTGAAATACGATCTGCACAAAGAAACAAATTCATAACCTGAAATGATGAATAGTAT
CAAGTGTTAAAAAGCATCAGATTTATCTTTTTGCACCACCCTCATTTGAACGTATTTTTT
TTGAAAATTTACATACATGTATCTTACGCCTTCATTTATCTCTGTATTTTTTTAGAATTT
CTTAAAATGTAAAAATATAAATATTCATAAAATTTAAATTTTAAATTCAAAGACCTTCAT
AGAGGCCGAGCTCCAAAAGCAATGTCCGCATGAGAGACTGATTTCCACATGTGGTAAGAG
AAGCACGTACGTACGTACGTTCATATAATATTTTATCACCTCTACTAAACACCTAAGAAT
ATAAAAAAAAGTGGAATCCTGCAATGAGACTTGGACACGTCGAACAAACATAAGCCAGGG
CTTTGAAAAAAGAAAACAGAAGCTAGACCGCGTGGCGAGCCCACCACCGCATATCACCTG
GTCCGCATGTCGGCGCAGAAAGGCGCATCCTACTCCGTACATGCATAGCGAGTAACATGG
GCGGGCATTGGACTTCACCGCCGCGCTACCCCACCCAATCTCCTTCCTGAACCTGCCTTT
ACACTTGTTTGTGTTGGTCTCCTACTTGGCCTCCATCGGCACCGGCATCCGCATGTGTCT
TGGGTTGAATCAGCATGCAGCTCGATCGAGCTTCGCGAAGCTACTTTCTACTCCAGCTAC
GTGGCGGCCACGCGCGAGCACCGCCGCGCGACGTGTCCCGTTGCTTCTGCCTATAAATGC
CACCGGCTCGACCCTCCTTTCATCAAACACAAAGCATTCGATCCATTCCAACCCAGAGTT
GAGCAGCAGCACTGAGTTTTAGTCCTTCCGATCGAGTGAGTGATTCCAGTTCGCGCATTT
TTTGTGACAGAGGAGAGGAAAGAAGAGAAGATGGCCTCCAACCAGAAGCAGGCGAGCTAC
GCGGCCGGCGAGACCAAGGCCCGCACCGAGGTACGTAACCGCCGTCTCCCGTAGTCCATC
GTGCTGCCGCGCGCACGCATGCGCCGTTGCTCGGTGATGTGAAATGCTGTCTTGGTTGTG
CAGGAGAAGACCGGGCAGATGGTGGGCGCGACCAAGGACAAGGCGGGGCAGGCCACGGAG
GCCACCAAGCAGAAGGCCGGCGAGACGGCCGATGCCACGAAGCAGAAGGCTGGCCGGGCC
ACGGAGGCCACCAAGCAGAAGGCCGGCGAGGCCAAGGACAAGACGGCACAGACGGCGCAG
GCGGCCAAGGACCGCGCCGCCGAGAGCAAGGACCAGACGGGGAGCTTCCTCGGCGAGAAG
ACGGAGGCGGCCAAGCACAAGGCCGCCGAGGCAACCGAGGCGGCCAAGCAGAAGGCGTCG
GAGACGGCGCAGTACGCGCAGGAGAGGTCCTCCGACGCCGCGCAGTACACCAAGGAGTCC
GCCGTCGCCGGCAAGGACAAGACCGGCAGCGCCCTCCAGCAGGCCGGCGAGACGGTGGTG
AACGCCGTGGTGGGCGCCAAGGACGCCGTGGCCAACACGCTGGGCATGGGCGGTGACAAC
ACCAACACCAGCAAGGACACCACCACTGGGAAGATCACCGGGGATCACTAGACGCATGCA
TTCGCGCTCAGTTTAAATTTGCTTTCCTTTAGTCGTTTGGTCGTTCGCGGGCCTTCCACA
TATATTTGTATGTTTCCACTCTTTTCCCGAATTTCAGTGTTGAGCTTGCCTTTGATTTGA
TGGTACTCGTGTCCGGTTCTGTAATGAGTTACGATCAATGTACTTCGATGTAGATGGATA
ACGAGGACAGTCGAAAGGTGGCACTAATAAAGTTGTATCTATCTTCTTCTGTTTAACATT
GAAGCCTCCATTCATTATTGTTACAAACTTATGCAGAGGCCGGAGGGATCTTTTTTCTTT
TAAAAAAAGTTACAAACTTGAACTTAAGATTGGCTTTATTTTCGTGATTAATGCTCCATT
AGACATCAACATGCTTCCAACCGTGAATCTATATAGTTTAGGGTCTTATTAATAGGTACT
CGCTTTATAATATAAAAGCATTTTTTATATTAAAAATATTTTTAGAGCATCTACAGCCGG
ATTTAACGAATATTTGCGGCTATAGCCAAGGTATAAAGACAATAGTCTTTGTGATATCTT
CCTAAAAAGTACAAAAAAATCTCTAAAGTACACCACTCAAGCTAATTAAGCCTCACTAGT
GGGGACAGGGCCTTTAGTCCCGGCCCTTGTCGTCCTAAATCCAACAAG