Contig Data
morexGenes
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Map Locations of contig_77029 (7170 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_77029

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77733 6 3249 bp None Available Available None
MLOC_77734 2 791 bp None Available Available None





CDS Structure of MLOC_77733






CDS Structure of MLOC_77734






Contig Sequence (7170 bp)

>contig_77029 7170 assembly3_WGSMorex_rbca.fasta
AAAGCAGAAATATTAGCAGTAGCGCTGGAATATTAGCCGTAGCGCTGGCTTAGCATTAGC
GCTTTATTTATTCCAGCGTTGCTGCTAACGTAGATACGAGTAGCGCTTTAAACCCAGTTC
TACTACTAACAGGTTTGCCGTAGCGCGTTAGAGGTAGCGCTGACCCCAACGCTACTGGTA
AGGGAAAAACCAGCGCTACTAGTAGGCTTTCTCCTAGTAGTCCAAGGTCACCTTGCTGTT
CTCAAATGCAAATGCCTTGGTTGCTGAGAAGACTCAAAACAACCTAGGAGCGCAATAGAT
TTCCACAAGGGTCCATCACGTGCAGGTTTTGTCATACAGATGCTGAAATCGTTCAGGGAA
AATAGCTATAACAAAGAACTTAATGTTTCATAACTTAGCTTTTCTTCGTTATACGTCTTG
TCGTAAAATGATCAACCTTGAACACCGTTCGCGTATTCATACCATCACCTCCCCGGGGAA
GACTTGCATGCAAGAGCCCGTTCTATCCTTTGAGAAAAAGAAAGAAGAGAAAAGAGGGGT
TTACGAACCTTGCTAGTTCAACAATCATTTCACCCAAGATATCGTGATCACAACATTTCA
TACAATATACATAATTTAAATATCTACTTTGACAAAAATTTGCAGAACAATTAGCTTTTC
TGATTATCATAGGTTCTTCTCATGGCTTTGTACAAAGGTTTACATGCCTTGTCGACAAAC
TCCTACAAAAGGGGATTGCCAAGGGTCCTGTAGCAACTACGCCTCATGGGTGGAATTTGT
GAAGAAGCTCAATATTCTAGGAGTTCAACAATAGAGTGCCATCTTCGGCCTCCACGAGGA
TTATGCCATGCCTCGTGACTCGTACCACCCGGTAAGGGCCTTCCCATTTTGGCGTCAACT
TGTTTGATCCATTCACGGAATGGATTCGTCAAATAACAAGGTCGCATTCCTCAACTCTTC
TCGCATGCACTTTGCGTCTATGATAGCGGCACAAAGGTTGCTGGTACCAAGTGGCATGCA
AGGCAGCCCAAAGACGATGTTCCTATAAGATCATGGCAACATTTTGCCATAGTTTCTCTT
GCTCGTCTTCCTCGAAGGCTTGCACTCGAGGTGATCAGTATGTGAGTTATGTAAGGTGCA
CAGCTTCTGCAACATAAACCAGGAAGAAGGGTGTCTCGCCGCTGGCTCAATTTTGTGTCG
TTGTGAGTGACCAAAGAACCACCGACAGCTCATCAATCCAATAACTTCCGCACTTGTGCA
GCTTGTCGAATGTCCTTGTCTTGAGGACACACAACACTTCAGCATGCACTCTCTCTACCT
AGCCATTGCTTCTAGGGTGAGCAGCTGATGCAAAGCAAATTATGGCACCAACATCGTGAT
AATACTGCATGAAGGTGCCCCTTGTGAACTATGTGCCATTGTAAGTGATGATCGTGTTGG
GGCCACCAAAACGGCAGTTTATTCATTTAAAAAGCTTGACGACTACTTGTGTTGTTACCT
TTCTCTCTCGCTCTACCTCATTCCACATTATGAACTTGTTGATTGAAATGAACTAGAACT
CAGAGTCCCTAGTAACACGAGGAAAGGGTCGACGATGTGAATCCCCGAGATCGAGAAAGG
CTAGGAGAGCGGTATGGTTTGAAGGGCTTGTAATGGCTAATGAATTTTCTTGGCGTGGAA
ATGGCATGCTTCACATCTCCTTACCATCGCCAAGGTATCTTGAAGGGTTGTAGGCCAGTA
GAAATCAAGACGGAGGGCCTTGCCAACAAGCACACGACAGCCGATATGGTAACCGCACAT
CCCTCCATGTATTTTTGCCAACAACTTTTGTCCATCTTCCCAATAGATACACTTCAATTT
CACCCCATTTGGCCTTCTCTTGTAGAGAGTGTTTTCTACAAACTGTTACATGCTTGATTG
TCGGCCTACTCTTTCAACTCACTACAAGAAATATGTCAACCCGTGACCTTCAATATTGGT
CACTGAATGGCCATTGTTTTCCATTTATGACCTTTTTGTGACCAAAATGGGTTGCTCAAA
AGATGACCGTCTCTAATGAACTATAACGACCTTTCTTCTGGAATGGTCATAGACATTTAC
GACTAAACGAAAAGGTCGTTGGTCCTACGACCAATTGTTTTGAGCATTAGTTGTCTGCCT
AGGGCATGTCGGATCCAACATCGCATGCCGACGAGGCAAAGTTACGACCAATTGGATTGG
TCGTTGATAAGAATCAGCCTGGTCCAGTTCGGTATTTTACATGGGCTGAGCCCACTAATT
CAGCCCATTTATATTTTTTCGTGCCAATTGGACAGTTTCACGAGCCAACCGTATAATTCA
GCCTTTTTATTTTTTCAGCCATGGCCTTTTTTGACCAACAATTTTAGTTCTCTTTTTTTA
TAAAATGGGTCCACTAGTCAAATAGGTCCACCTTGTCACGTTCTAATAAGTGGGTCCCAG
CTATTAGGCTTAGATTCTTCGTATTTTAATTTGCAATAAGAAAATAACCAGTATTTCAAT
TGGCAAGCAAAAAACATAATACAAGGTGTAAAATGAATCAATACAAGCTCTACAAGTGAC
ACAGAATACAAGTTGTACTTTACAAGCTCTACAAGTGTAATAACTACATACATGCTCTAC
AAGTATGGGAATCACGGTTACAAGCTCTACAAGTGTTCTCTTCTTCAGCATGGAGCTCCT
TCGATGGCGATCAAAGGCCGACGTCACTTGAGGGCCATAGTCAGGGCTGGGACTTCCATG
GTCATCCTATTACATAATCAGCTGAGAAGAATTAGAAAAATCGGAGCCAATATATTATGA
ACATTCCTTTCAAAAAACAAAATATATCCTAGACACGTTATGGACAGCCACCAAGGAAAA
TCAATAAACAAAAAGATCAGCGTATCAACACATTTCCATGGATGGATGGGATTGTCTAAT
GTACTACTTTTCTTAAATGTGCATGATGTAGTACTAGAAAGGAGATTTACTAGTGATCCA
TACATAGGGAATCTGCATGCGTATTTGTGCAGGATTGGGTCACAATATGGAATAGATGTT
TGCAAGTGAACATGATATTTAATTATTATTTTCTATAAACAATAGAGTTAATTCGGACTA
CCCTGCATTTTTTTAATGTGCACTATAAAAAAGACTTTTTGGATACAACCGCAAGAAAAA
AAGATAATTCTTTGATTTAATATTTAAAATATTTTTTAAAGTACATAATTTATATACTAA
GTGTTTTCTAACTTCAATTTGGACCTATATAATGCAAAAAAATATTTCTTAGATTCCATA
ATGACCTATGGAAACACTTTTGCACTGATTTTTTTGAAATAGCATATATAAACCACATTG
TATTCTCAAGCCTACGACATTAGATATCTTAAATTATTATTTCGAAGAACTGGGAAAATG
TGATTTCTATGTCGACCAAGATGCAGCATAAAAAAGACATTAAATGATAATGAGCAATTT
TAGGTATGCAAATGTGTGACATCCATGTGCACATCTCGAAGACTAAAATTCACATAATTT
TAATGTTTTGTAACCATCTAATTCGTCGACAATAAAGAATCAACTTAAACTATTCTGAAA
GGGCATAACTATATTTTTGAATTACCGCTCAACAATAACCAATCCTAATTACATCAAATT
GATAAAGGTAACTGAGACAAAATGATTTTTCAGAGTAGAACCGATGCTCAAGACTTACAA
GCAACTACCAAGCCTAACGGCTTCAATAAAGAAATTCAGGTGCAACATAAAAGATATCCT
CAGCGTTGCAAAGTTAGAAACCCACAACAACTACCTAACACTAGCAGCAACCGGTGGAAT
AAATCTACACAAACCTAGACAAAGGAACAAGACCAGCACCAATAGCATCTCGGACCTTCC
GGTGCAGCAGCTCCTTCATCTCAGAATCATAATTCTTAGTGTCAAACTGGGAACCTTCCG
ATGCCATTCCTGCCATGGCTATAGCAGAAATAACATACGTTAGCTCAAACAAGCAACATG
AAAAGAGAGGTGAAACAAAACATGTACAAGATTAGTTAACCATAAAGTACATTGTCGTAT
ACAAAGATAACATCAACAAGATGGTAAGAGAGAAAAAACATCTCACACTACTCCATATTA
CATGTCTATTTTGATGTGGAAAGTAGCACCTGAACAGGTCTATTTCTGAGCGACAACACA
CACAGCAATGGACTACCACTCTTGTGTGAATGGTGATACGAAAGGAAACGATGGGTGGAC
AGTTAGTTTAGCAAAGATAAGTGGATACCCATTATAGTCCAGCATGTTCAGGTGTACCAA
ATCCTTCAATCAGCATATGGGATATATGACAGGAGAGAGTTCATCCAAACACAATTAAAG
AATTTGAAGCATTCTATCTAACAAGATGGAAAAACAAGATGGAAACAAAGCACACATATG
CCACAATGGAGACCCGTGATGCCATCATTTACTCTCAGCACCGCAGGGAGAGCCATTCAT
ACATAGTGCAAGCATGATTCAGTATTCCCTGGTGCAGCAGAAAAAACATGGTGCCCAGCC
ACATACATAATCACTAACCAACAAGTACTTTCTTGTCTGGCACCATTTTGTGGTGTGGCC
TGCAACACCAGCATACGTCGGCCAACGAAGTGAACCAACCATCCAGTAGGAATGGATCGA
GAGCAAAAAGAAAAGATGGTTTTATTTTACAGGTGAAAATAACACACATGAGGTCGGACC
TCCCAAAAAAAATAATATAGGAGTACATGTCAAGCTCTCGTAGTGTCTGTATGTGTGTGT
GCAACAAGTAGGGAGAGAACAAAGGATTGCTCGGTCTTGCAAGCAACATCCGACCAACCA
ACAAGCTCCTTATTTGTCCGGCATAGGAGCCGATGAGCCAGCCGGCAAAGGAAATCGACA
CTCCAACATGAACTCGAAGCATTTGAGGACAACATTAGAACGACTTCATTGCACTAATCA
CAGTTTGACAAACGAAGGAGGGAATTAATCCTCTCGTGGCACCAACTTCTAATGCTAATC
AAGCAAGCGATGATTTTTTTTGCACACACATGGCGACATGGGAAGGGAAGTATCAGCTCA
GAACTCAGCTGTGTTGCTGCAAAATGAGGCCCTAGACGACCCAGATCCACCCAATCCGCC
CAAAAGGACCCGCATGCATAGATCGGACTGGCGCGGTAGCAACGACGAGGAAGAGAAGCG
AGAGACGACACCGAGGGAGGGAGAGGGATTACAAGGTGGGCGAGGAGCGCGTGGATCCCG
GGCGGACGTGCGCAGGCTCCATGCGGTCGAAGGGTTGGAAGTCAAAGTAGGTGAGCGGCG
GGTTGATGATGTTGTCTCCGTATGCCACGGAGTTGGAGACAGCGGTGGATTAGGCGGAGT
AGGCAGGTGTGGCGGAAGGGAATATGGTCGGGGCTGGGGGAGGAGGAGGCGGGGGACGAC
ATAGGGACCTGCCGGCGAGGTGAGAAAGCTTTGGCTGGGTTGTGGTGGATCTCCCTCCCT
TGTGTTCTTCTCTCCTTTCTGCTGATGGGAAGGGATGGGATGGGAGGGGAGGGGAGTGTA
CGGGAGGAGGAGGGCACGGAGGAGGCCATGTGCGGAGTGATGAGCTCCATGAGGGGAGGC
GATGGGAGGACAGAGCACGGGAGGAGGGAGGAAGGAGAAGAGAGGAAGAAAGGAGGCAGG
GGGTGGATGGAAAATGTGAGGAGGACAAAGCTACGTTCTTGGCTAGAGAGGTGCGGGCAG
CCGTTGGATCCGGGATCATCCAACGGTCTTTGATGCATAATCCGTCTGAGATACCCATGA
ACCAATTAAAACGCAATTAATACTATGAAGACGTTATGACCATCTAAATTGGTCTTAATT
TATTGAAAATAAGTTTTTTTCAGAGGAAAAACAATTTCTATTTTGAGTGACAAAGATGGT
TGTTTTGTGAAGGATCTTGTTGACACCTGATTTTTTCACGGAAGGTAACATTATTATTAT
TGATTCAACTGAAGAAGTGCTCTACATGAAAAAGTTTTGCAGTGTTGACATGAACATCGT
TGAAGTTTGTGTCATCACGGTACAATTTCATGTCGAAGGCCGATCCACACGGCCCAAGTG
GCGATCAGGTCGACATAGGGCAGCCCATAGCTGCGTCGCGCTCCTACGAGGTCCCTCCCT
GGCATGTGGGGGTTCAGGTCCTCAAAAGAATCCATCGAACTGCTTACGGACCGCGCTTCC
TGTCAGGTCTCCTTCGGAGTGAGCTGTGGTGCATCACCCTTGGCGTCGATGGTACACGGT
GACATGTTCGCATATGGTCTAATGATTTCTAAAAATGGTGTGGTGCCATTTTATGTCCAA
TTAACCAAACAGTTGGTTGTCAAAATCTTTCCATCCACCTCTCGTTCAAAAGACAAATTT
CCTCCGATTCAACTCAAAGAGAGTCAAATTTGAACTACAACTGCCTCATAGATTTCTTTT
TATTTTTCTCAAATCTCATTTCTAGGTACATAAGTTTTCCAAGATTCAACCACTAGTTAG
GACCGGTCATGCCCATTGTTTTGACCGCATTTTGAAACGGTCATGAACAAAAATGGAAAA
CCTTCGCATTCTGTCATTATATGTGACCAAGTTAAGAGGAAAAGTAATAAACTTGTAATA
CGACAATTATTTTAAAAAAGTGTTCTCACAAANNNNNNNNNNNNNNNNNAGATTCATGGC
TTTCAAGTCAAATGACCAATCTTCATCTTCTTTGGACGAAAAAATCCTTTTCCATTTTCA
TCTTACAATGGCAAACATTGTTGCCTAAGGAATTTTTCATTTTCTTTGGACGAAAAATTC
ATTTTCCATGTTTCGAGTGCCCAAAATGAGTTTTTTGAGAAGGACCTACCATATATTTGC
TGCAAAATTGGACCAAATCATTTTTCTAAAATACTAGGCCATATTCAATATACACTTGAC
CAAATGGTTGGGTGTCAAAATCTTTTATCCACCTCTCGTGAAAAAGACAAATTTTCATCG
ATTGAGTTGGAAGCGGGTCAAATTTGAACCATAGTTGCCTTATAGTTTGATTTCTATTTT
TGCCAAAAACAATTTTGACATACAAAAGTATCTATTTAATCAGAGAAACACTAAAAGTTT
TCCAAGGTTCAACCACTAGCTAGGAACGGT