Map Locations of contig_76856 (9437 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_76856

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77896 2 2253 bp MLOC_77896.2 Available Available LOC_Os06g46820.1, FRAME:-1, EVALUE:0.0, 13106.m04950 protein solute carrier family 35 member F5, putative, expressed
MLOC_77704 4 3387 bp None Available Available None





CDS Structure of MLOC_77896






CDS Structure of MLOC_77704






Contig Sequence (9437 bp)

>contig_76856 9437 assembly3_WGSMorex_rbca.fasta
TTGGTTGGGAAAGGTTCATGCTAGGACCAATGGAAAGTTGATCGCCAAAGATATTACCAT
CAAATTGTTGGTCGGGAAAGCTTCAACACCAGCGTCAGGTGAAAATCGGTCGGCAAAGGT
GTTGCCGTCAAACAGTCGGTCAGGAAAGATTCAACTGCAAGTCGGTCGGGAAAGATCCCT
ACCTGTGCCATCAGAAAATCGGTTGGCAATGCTCTTCAGAGGCGTCAAACAATCGGTCGG
CAAAGATATGTCGGTCGGGAAAAAGGCTTTCCCGTCTGGATTTACCCCAACAGACGCTTT
CGATCGGCAATATTCTTTGCCGACATTATTCTTTTCGGCAATATTCTTTCCCGACCGACT
GTATGTCAGCAAAGGCGGTTTTCCCGACCAACCTATTTGTTGGAAATGCAGTGTCGTGGA
GTAGTGGGCGGATCACCAGTGACTGAAAAATAAGGTCGCAATTTTACTAGCCCTGTCCAA
ATCAAGCACCTAAATGGCCCAGGCCCAACAAATTTTGTGCTGCGTTCATAAACCAATATT
TGATATTTCAGCCCATTACTATTTTTTATCTCCGTCAAGGTCTTGTTATTGCACAGTTTT
GGTACACAAGGCATTGTAGATAATTCCAACGAAAGAACATTATGATAAGTAGTTCCGTTC
ATTTAAGCACATCATGGCACATACTTTACAAACATGCATCACATAAAATAATTCAACCTT
CAACTCCACTACAAATCCAACAAGTGTTGGTACTATATGACCAATACAACCACTGTGGCT
TCAATGGAACACATTAAAGAACATAAAATTAAATTGTTCACATGTAACAGCAAATTGAGA
AACCATAGCATCGTCTGTCTTCCACTTTCCACTTCTTCTGAGTAGCCAATTCTGGATTGA
GGAACTTCCTCGCGTTAAAAGGATCACAAATGAGAAGAACATACAGACCAGAAGGTTGTG
GTTTACATGCCTATTATCAAATAAAGAAATGTCATTTCATGTGGTTAAATACTATTCAAT
ACGGTTTGATTCACATACCGATGCAATAAATATCGCTATACTCTGTAAGAATATTCTCAG
GAAAATGAAGCCATGTGCAGTTAGTTTAACCAATGTTGTGTTCTGAAAAAATGACGGTAA
CTAAGACAGGCGTACAAGCTAAGGAATAGCAAGCAACAGCTAAAAGCATTGCCTTCCATT
TATTTGCAGTAATAAAATCATCATATGTTCACAATTCGGATAAGGAAAGATAATTTGCAG
CTCCCCACTGTTGCTGGCCCCACTAGACACAGACTCCAGCATAACGACACATTTGAAATC
TCTCTTCGACATAAATAAATGAGAGCATAGTGCAAAGTCACAACATATTATACAAACCAA
GCTAGACCTAGGGTTTGTGGTGAGTGGCGTAAATACCTGCACATGGAGGCTGGAGTAGTT
GAAGTTGGTGTACTTGGTACATAAATAAAATGAGTTGCCAAGGGGCAGGTGATGATGGAA
GGACGCCACCACCCAGCGCTTACAATAATTTGACCATGAGCGACCAATCAGGCAACATAC
ATATAATAACATGTAAATATGCATAATGCGCAAACACACAACATTCCAATTAAGCAGTTG
CAGAGCACAAGTAAAATTAATGATAGTAATTTTAGCTCATGGCCAATTCTAGAAATTATA
GTTAATCATTTCCTGCTAACACTAGAGACCATGCCAATAACAAGTAGCAAGTTTGTGAAC
AGTACAGTGCCTAAATCGTAAATAATAGCCTACACAAACCCAACCATAGCATCATTATAA
GTCATGTATAAATAGGAGCACTAAACAGTAGACATGGTTAGGAGAAGCATTGCAACCATG
GGGATATTAGGACCAACATATACTCAACAACAAACTGAGCACAGCCATAGCACACACAAG
AGTTGTTAAACATCCATGTGATTTCGGCCTCTTGGGGCATGACCCGCTCCGGCATCCATG
TGATTTCCAAATTAAGCTAACTTAAATATGGCATGATGTTGTACACTCAAATAGTGCAAT
AAATTAATAACATAAGTATAATGTAGCCAGGTATGTTGCACAGGATAACATATTAAGTGT
GTATGCACGCAATTGATAAATTGCACGTGTATAATTTGGCCATATGTAATTAAGAATGTT
TATCGATAATAGGCAAAGATTTTCTATCCTTTTTATGTCCGCGTATATCTCTTTTGTTCT
AAATAAACATGTGTCCATCTATATCTAAAGTGATTTAGATTATTTATTTGTATAGGAAAA
ATTAAGTTTTTGAGTTTCCTTTTAACCAAAATGAAATGACATCTATTTAGAAGTCAAGGC
TCATTAATAAGTATATAAAATATAACTTGTGGACTCAGCATCAAAACATGTACCATTTTG
TTCTTCAAAAGAAGAAAAGGAATGGCATGCATACTTTGCTAAAAAGCATGTGTACTTTTC
TAAAAATGCATGGATGACTGTATTAATTCCTGTTCAGGCCTTTGTTGAAAATGAAATGAG
TTTTTTTTCAAAGAGCTGTTATTGCAAGGAATGAATTTTTGAATGCATTGAAGATGAAAA
AAACTGACAAAAGATCCGAAGTTATGCCCAGACTTCAGATAGAGAATTGGAACCCACATT
AACAAATGTGATTCTTAATGGGGTGAAAGCCTAGTTTTTGATGACCATCAGAAAATTAGA
CACACTCGCTAGAAGTGTTCCGACCTTGTATAAAGCGGGGTGAAAGTCTAGAAGTAGGGT
ACTCATAATTTATCGGTTCCGACAGGGTGAAAATCTGGAAGTAAATTAGAGTGTAATCTC
TCAGACCATTTCACAATTCAGAGAATTGCCTCTGGATTTTAACCCCAGGAATCACTAAAC
ATGTACTAAGCCAAACTAATTCTTCACCATAACCAAGAATTCAATAAATAGTCTGACTGT
ACTGGACAAATATGTCGGCTAATGTACTTTCATCGCTACCAGCTGGCCAACACGTAACCA
ACATGTATCAATTTCTTTTCCAGATGTTTTGGCAAATTGACAAGGGCATGTTGTGCTGCA
AGCTACTAGTATCGCGACCCTCCGAGAGAAAGAAAGAAAAACTGAATCATGGCATGACAA
TAATGTAAGAAAACAATCATGCAGAACAAAATATGAATCTTGGCATGACAATAATGCAAG
AAAACAATCAGGAAGGCCAGTGGGGGAGAAGATGTGTGGATATACCTTGCCAACAATGAT
GAGCCAGCAGCCATCCTTGGAGTTGTATTTAGACACCTCCTCCAGGATCAGCGCCTCATC
TCTCTTGCTCCCTGAAAACATAAACTCATTAAGCTATGAACACCTCGTACATGCATGGAG
GCAACGCAACTCACAAGTATGGACAAGCAACACTTGTATCCGAAATAGAACATCAAATTT
ATACAACAAGGAATGTAGGGGAACCTAAAACAAGTTATAATTGGACCAATGTAGCAAGCA
AAAGTGGAAGGCGGGAAGGACAGAGGTACCTCGATTCAGGAGGGGAATAAAAGTAGGACG
GCGGCGATGATGGCGAAGATGTGCACGGTGGAGGGAGAAGCAGCGGCTGGTCTTTGTTGA
ACATGCAGGTCCGGTGGCAGTAGGGGTAACTAGTGGCATCCGTGGAGAAGCCGCGCCAAG
CTGCAGGAGAGGCAGCTCGGACGACATCTAGTTCATGATGGGAGATGCAAATCGGTGGAA
GATTTCCACGCACTCGGAGGTGGGAGGGGGAGATCTGGACGGAGTGCTTCACGGGCGAGG
CGGATCTCAAACCACCGGCCAGAGGAGAGGAGGGACTCCGGTGGCCGAAGATCAGGCGGG
TGGCGGCGGCAGCGTCGATGGAGAAAACCTAGGAGTTGGTGGAGGGTGGGTGTTGGGCTC
TCTAAGATCTGTGAGGCTCCGCAATGAAATGTCGGTGGTGGAGACTAGGTCGCGCCCCGA
ACCCTAGCCGCGGGGGATGGTTGAGCGCGAGCGTTGGAGGTAGGGAGGGGCGGATATGGA
TGGAGGGATCAACGGAGCGGTACTAGGTGAGCTTCGCAGGATGCTGCGCGCAGGCCATGG
CTGTCGAAGCTCGTCGGAATAAGGTCGTCGGAGGCGGCGGCTAACCCTAGGGCGTGGGAG
CGCAGAGAGAAGATGCGGGTGCGGGGGAGAGTGCAATGGGAGGAGGTAGGGTTTGGGTAG
TTGGTTGCGGGTGGGTTTTTTTTCATTTTTTCTGTATATATTGTAGATGGTTGGATGGAT
GTCAAATGAAGAGATGGATGAATGGATGGACGCCACCTCACCGATCCGTGTGATAACTAA
TTCCATCAATTAGAAAAGAGCACATGTAATTGTGTTTTTCTTTTTTTGTTCTTCTATTTT
TTCACATGAAAAATTCAAAAACATATTTTTTATTCTACAGAGGGGTTCATATTGTAATGG
CAAGCAATGTTTTCAAAGGGAGTTCTCATTTTCTTTGCATGAAAATTTCGTTTTTCCTTT
TTCGAGTGTTCAAAATGAGTTTTTTTGTGAAGGACCTATCATATATTTTTTGCAAATTTG
GTCCAAATCAATTTTCTAAAATACTAGGTCACATTAATGTCCAATTGAACAAATTGTTGG
GTGCCAAAATCTTCCGGTCGACCTCTAGTGAAAAAGACAAATTTCCACTCATTCAGCTCG
AAGCGGGTCAAATTTGAAATACAACTGCCTTATAGTTTGCTCATGATTTTTTGCAAAAAA
ACATTTCAAGGTACAAAAGTATCTATTTAATCGGAGAACAAAAAGTTTTCCAAGATTCAA
CCACTAGTTAGGAACAGACATCGAGGACCTACAATACGGGTATAAATAGAGTTACACATG
CCGGTGACCATTTTGTGTAATGGGATTATGACCTTCTTGATAGAGATGGTCAAAATTTTA
TAGGGTTTGGACCCTCTTAGACACCTCATGACGTTTTCGTAAATTATAGTCATAGATCTA
TGACCAATTCAACTGTGGTCGTTATTTTTTGTCATGAACAAGTTTATTTCTTGTAGTGCT
TGTGAAGTTTAAGACTTAGGAATTTTAATATTACACCTCTTCTAGCTCAAAAAAATTAGG
ATCATGCGGGTATTTTGAAATCTATATGATTCGAGTGTGATGGAATTCTGATTTGATGCC
TCCTGTCTGAATTGATTTCTTCCGGGGAGTTGAGCTCCAAGGGGTTTTCGACACATCGTT
ATCATTCAGCTTACTTAGTATCTCAAGAAGCAGACCTTGAAACGCAACTATACTTTGCAT
GGTGGCAAATAATTCCGTGACTTTTCCCCAGTACTGGTGGAGATAGATCGGATGATCTAC
CTGGTTTGGTATCGTCTTTGTTTTGAAAGTCTGGGGTGGATGATTTTGCGGAACTTCTCG
GATATGTGTTGATAGTTGCAGGAAAGGTGTAGCTGATTACATTGAGTAGGTTCCCCGACC
CACAACATGATAGCATAACAAATAAAGATATCTGAAATTCTCACGTGGGGATTGAAGTAG
TCACCTGGAAAAATCTTTCATCGGATGTATGTTGGGACATACATTTGTTCCAAGCAATTC
TAGCTCAAACTGGACAATTGCAAGCGGCTTTCAATCATATGTTGTCGTCACTAATTTCAT
GGAAGCATTCTTACTAATTCTAGTTTGAATGCAAATTTCTAAGACTTTAAGTTGCAATAT
TCAAGCCTTTGATTCAGCTTACCAGCTTCATCTTTTCATCCATGATCTAATATTCATGCC
CGTCTCGAGGATGGCTCGAGCAACTCGCCAGAATCCAAGTCGTGATGGGGAGCAATCAGA
CCCTCCGCCACCCCGTCCTCCTCCTCCGGAGGTGTGGCAAGCTTTGATGGCTACAACCAA
TGCAAATAGTCAGATGCTGCTTCAAATGATGCAAGAGAGGAACCAAGGCGAGCAAGGGAA
TTTCAACAACTAGCAGTTGTTTGCTTATCTCAATCAATTCCTTGCAAATCGACCCAAGTC
CTTCACCTGTTGTGATCAGCCGTTTGATGTGGGAGATTGACTATGCGACATGAGAAAGCA
TTTCGAATGCAGCAATATGAGGCGTGAGGACTATGTCAGATTAGCTACATTCCAGCAGAA
TGGTGGCGGAAGCTCAAGGATTCCAAAGGTGGCCATTTGATTAGTTGGGATTACTTTTGT
CCTGATTTTGGAGTCATCATATTCCGGCAAGCTTTGTTGAGGGTATGCGTGAGAAGTTCA
AGAATCTCAACAAGGAGGCTCATTTGTTTATCATTATAACATCGACTTTCAAAACTTGGC
CCGTTATGCTAAGGAGGATGTTCCTGAAGAGAAGAGCAAGATCTATCAATTCAGAGGTGG
TCTCATGGAAGTTTGCAGCTTTCTCTTACCCTACACAACCCTCCTGAGTTTGATTAGTTC
TACAACTTGGCTCTCAGCTCTGAGTCAGCTCTGCTCGGGGTCGAGAATTCAAGAGAGTGC
TTCAGAGACTCTCATTTTTCTTCATCCTCACCTCAGATTGTTCGAAAGTAGCAGAAGTTT
TGGGTTCCTCCTCCGCCTCGTCCTCATCAACAGTTCAAGTAGAACGGTGGTCGTGGATGT
TCCCACCCACCCAACCCAGGTTTCCAACAGAAGTCTTAGCCCCCCAAGTCAGGAGCTCCT
CCAGCTCACTTCCGTCCACTGTCAGAGGTTACTTGTCACAAGTGTGGTCAGAAGGGCCAC
TACTCCAATAAGTGTACCAACCAGCGACGTCTTCCACACCCTCCTCCAATTAGGCACCCA
AGCAATGCAATGGCGAAGCATAATCACAAGTCTGCAAGAGTGAACATGGTAAATGCAGCT
AAAGCGGAGGATTCCTTAGATGTGATTATTGGTAAACTCTTGGTTAATTCTTTTCCCGCA
AAGGTTTTATTTGATACTAGTGCATCACATTCATTCATGTCTATAACTTTTGCATCCAAG
CATAATTTTCATGTGATGGAGTTACCTAGGCCATTATCGGTTGTCTCTCCGGGAAAATTA
ATGCATGCAAGCACGAAAGCCTCAAATGTTTCAATCAAGATCGGCAGTTATTCTTTTCTG
GCTTATCCAATTGTTCTCGGCAATTACGATATTGATCTTTTTCTTGGCATGGATTTTCTG
GCGATGAACAAGTCTTATGTCGATTGTGAAGCCAAAGAAGTCAAATTGACTCGTCCTTGT
GAAGACGTGATCATTTTCGCCACTCGCGATGACACAATCCGTCTGTTTTCTCTCAGTGAG
AAGGGTGAAATCTCAGCCATTTCTCATGTTCCTGTTTTCTGTGAGTATCAAGATGTCTTT
CCAGCGAAATTTCCAGGAATGCCTCCTCGCCGGCCAGTATAGCGTGTGATTGAACTTCAG
CCTGGAACTGAAACGGTTTGCAAGCATCCTTATAAACTTGGTCCCGAAGAGTTGAAGAAG
CAACTAGATGAACAAGAATGTATGGGTTTCATCAAACCAAGTTATTCTCCTTGGGGTTGT
GGTGTTCTTTTTGTGAAGAAGAAAGATGGCACGGACCGACTCTGTGTCAATTACCGCCCA
TTGAATAAGAAGAAAATCACAAACAAGTATCCACTTCCTAGCATCAATGAATTGTTTGAG
AAATTAAAAGGGGAGAAGGTTTTCTCCAAGCTTGTTCTTCGGATGGGCTATCATCAAATC
CTCTGTCGTGAAGAAGATATTCCTAAGACTGCTTTCAGGACAAGCTTTGGCTCTTACGAG
TACACATTGATGTATTTCGGTCTCGCCAATGCTCCTCCGACTTTCTCTTGCATGATGAGT
TATGTCTTCTCTCCCTTCAAGAATGAATTCGTCTTGGTGTATCTTGATGACATTCTAGCC
TTCTCACAGATTGAGGAAGAACATGCAAAACATCTCCGGCTTGTGCTAGATAAGCTAAGA
GAGCATAAATTCTATGCTAAGTTCTAAAAATGTGAATTTTGGCTTAATGAAGTGGTGTAC
CTTGGGCATATCATCTCTCCCAAGGGCATCAAGATGGATCCTAAAAATGTTCAAGCCATT
GTGAAGTGGGAGCCTCCTCAGAATGTCAAGCAGCTTCAAAGCTTTCTCGGGNNNNNNNNN
NNNNNNNNNNNNNNCGTTGAGAACTTCTCCAAGATTGGTAAGCCTCTATCCAACCTTCTT
CAGAAGAGCGTAAAATATGTTTGAACTCCAGAGTGTGATTTGGCTTTCAATACACTCAAG
GAGAAGCTCACCTCGGCTCCAGTTCTAACTCCTCCTGATGACTCCAAGCCATTCCAAGTT
TCGTGTGATGATTCTTTGCATGGTCTTGGTGGTGTTCTCGTGCAAGACAACAAAGTGGTA
ACTTATACCTCGTGTAAGTTGAAGCCAAGTGAGAAAAACTACCCTACTCACGATGATGAG
TTGGCGGCAGTTGTCCATGCTTTGGTTACTTGGAGACACCTCTTGTTGGGAAGACATGTT
GAAGTCTACACCGACCACAAGAGTGTGAAATACATCTTGAGTCAGCCGAATCTCAACCTT
CGTCAAACTCGTTGGGTGGANNNNNNNNNNNNNNNNNNNNNNNNNNTTGACTATACTCCA
GGCAAAGCAAATGTGATGGCACATGCTTTGAGCTGAAAGGTGTCGGCGTCAAAACTGGCA
GATCTCGGGTAGGGGGTCCCGAACTGTGGGGTTTAGATTGATGGGTTACAGGAAAGAGGG
GGAGACGATGTTTACCCAGGTTCGGCCATCTTGAAGAGGTAAAACCCTATGTCCTGCTTG
ATTATATTGACGGGGAACGATTGTTACACAGTTGATCTTCCTCGAGATCGTATGAGCTAA
ACCNTAGATGAGATAACCTGCCTCTATGCAGAAGAGCCCCTGGTTTATATAGACACCAGG
GCCCCTAGGGTTTACATGTTACCGACTTAGATCGGGGGTAGATGGGCCGAACTGGTCCTC
CTGTCTTGGATTGTACGCCTAGTATTTGGAGCTTTCCATCTTAATTACACAGTTGTGAGA
TAATCTGGTCTTCAATGATGTCACCGATATGATCGGCCCATAAGGGACGACCTGATTGCC
CGAGGACCCCTTAACCCGGAACTCCCTCAATAGCCCCCGAACTGGCCTTCAACGTCGATG
TGTAAAGTCTTTGACAACCAAGCACGTAGACAAACCGGCTTGCACGACGAGTTCCATTTA
TATTCGGCTGGTATCGGTTTAGTAGCTCCAATGACGTAGTACCCTCAAAAATGGGTGTCA
TTAAATCCAAAGGCCTTTAAAGGCCCGAAGGTGAACAATAGTCTATCTGACAACTCTTCT
GACAAAAATTTGTGATGACAAAATATGAGTAAAACTCGAGTCGCGGCTCAAGGCCACTTC
CCCGGGGCACGTTCTATCAACAACAGAGATCGTGTCCCGTACTTAAGGGGATTCTAATTA
ATGACCCGAGCCAACCT