| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_7661
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_77654 |
1 |
334 bp |
AK366716 |
Not available |
Available |
None |
CDS Structure of MLOC_77654
Contig Sequence (5644 bp)
>contig_7661 5644 assembly3_WGSMorex_rbca.fasta
GGCGCGACGCCGGCGGTGGTGATCGGCGGGTTCCAGATGGAGAACAAGCTGGTGGTGCTC
GACAACGACAAGAAGACGCTCAGCTTCACCCCGTACCTCCCGGCCAGGGGATTCTCCTGC
AGCAACTTCAACTTTACCAGGGCGGGATAGTGATCCACAATTTCATGATAATTTGTAGTG
TTGGAATAAAATAAATAAATTCACTGGAATATTAATTAAGGACAGCGATAGCTTCCAAAC
TTTCGGCAGCTTGCATTGGATCCGAACAATTTATATTCACTGATGACAAATGCAGCCACG
CATGCAGACTCCCTGATGACAAATTCCAGTAAGCACATTTTAAATAAGAAAAAGGTTATA
AATGAATATAAAATAAACTACAAATTAGGTGAGAAATAAGAAAAATGTTACATGTCATCG
GCACATCACATTATCTCTATATATTATGTCATTTCACTACCAATGTTGGCTGCAAAACAA
GAAAAAAACAGAGAAATTGAAAATGATATATGTTCAAAGGAGATCATCAATACAATTTTG
CTAAACCCCAACTTGAGTTGCCCAAAAGTATTCTAAACTTGAGTTTTGTCACGACAAGAA
TTATGGAACAGAGAGATTACCTCTTATATCAGATCAAAGATAAATAAATTCTGAACAGTA
ACTGATAAACTGTTGTAGATAAATTAATCAAAAAACACAAATTAATGTGCAGGTTATAAT
ACAGTGAAAGAATAAAGTTCTTTTGTGCAATTTGCATAAATACACGCCTCACCTCCTCTG
AGTTTCAAGAGATTTCCAGACTTGGCCCCAACATAGCTCACAGCATACGTGTGAATCTTT
GCGGTTAATACCATACATAAAAAGGAAAAACAGTACAATCATTGGCAATGCAAGCCGTAC
ATATGGATTCTCTAGGCCAATAAACAAGTATGGAAAGTAGATGATATTGCAAACAAATTT
CAACATCGATTCTCCATGAACATCGTCTTCACAAACTTCACTAACCTGAACATTTGCAAT
TGATGTGTCTGGATTTGTTTATTACAAAAGGAGGTCAAACTTGTGTTCTTCTTCAAATAA
TACACCCATTCGTATTTATCTTTATATAACTTTCTAATGCTTTCTTTCAGGATAATTGGG
TATTTTGAGAGTACATCGGATGCAATCATGTAGGAGGACCACTGGAAGCTCTATTACAAT
ATAATTGAAATAAAATAACTCAAATGATCATTTCCCTTGCGGTAAAAAGGAGCACATTTA
GCTGCAATCCTCAGTAAAAGGAAGATAATCAGGAAAGAAGAAATATAGAAAATAATCCAT
AATAGTGATAGAATAGTCTCAAATGTTGCTTAACCAAGTGAAACCTAACTTTTTTGTACA
CTAAAAAATCGTAGTATTGAGTTATCCAGGATAACATACAATTTCTCCATATTATATCCA
AGAAACAAACAACACAAAAAAGTAATTGAGGGGAAGATGGCATTCTTCTTCTTTCTTATG
AATCCTGATTATACCTGAAAATAAGATGATTCGATCAATACCATCTTCTTCTTTCTTATG
ACTCCTGATAATACCTGAAACAAAAGAATATAGATACCTCCTCAATCATATAAAAAAGAG
GCAATTACTCAAGATTATACCTCTTTTGGGTATTTCCCTCTTTTGGGTCGCCCGCCGCTC
TGAACCATCATCAACACCAATGTGATTGTTCGCCTCCAGGACGGGACCGTCTTCAGCAGT
GGCAGGGCGCAGCAGCAGAGCCCACTCCCCGACGGTGGCAGGGCGGGAAAGGAGAACCGG
CGGTGGCGGGGCACGGGGAGATTACATGATTAGATGCTTTAGATTTTAAGTTGGATCTAC
CTCTTCGTTCTTTTATAGTGTAGATGTGAGCAAGATGCCGAGTTACCAAAAAAGTTCTTC
GTTTGGTGACAAAAAACAATGGGGATGTGTTTGGTTCAATACTATTTTACCCGTTATCCG
ATTATGCCATTACTGATTCCTTAAACATGTTTCGTTGATTCAGCCCCTAAACACATACCC
CGCAAACAAATTAGAGCCCAACTTAAAACCGGTACCTCTTCCGCAAAAAAAAACACTTAA
AACCAATACTGCCCAACCCCCAGAGGAAACAGATTACGTTACCGGGCGGAAAGCTTCGAA
GAAATCTGGCGAATGGCGACTGCTCGAGTAGAACGTCCGCCGCTGATGTTTCCCCCGATT
TAGTGCAAGCGATGGTGGTGGGTGACAATCTCCTTCACTCGCCGCCGTTGCTGGCGGTCG
ATGCCTCGATCTCACCCTCGATTTCCTGTGACTCACGAGCAAGGGTGGAGCAGAGCATCA
TTGCATGAAGAACAACAACCAAACAAGATGAGCAAAAAATCCTGTTACGTCCCAGTCCCA
CCGTAAGTTGATTCCCTTACCATTTACGTTATTGTTGCAAAAAAACACAGCGTGGGTGAT
TTCCTTCTGAAACAGAAATACACTTAATTACATATTTAATTTGCCCCTATATATCTTTAG
TTGACATACTCTTTTTGTTGTGGCACGTTGCACTAGCTAACTGAAACTGCCATGCTGCAT
GGAATCCTGCATCAAACTCTTTGAGGCAACATCCTATTTCATATTCCTATTCTTTTCACA
GTAACAATGAAGTAAAAATAATGAAATTAACTTGCACTGATGAATGCTCTAGGGTCTTTT
ACACACCATTTTAGCACCTAATAATCAAGTGTAAGAGCATCTACAGCCAGACTTGGTAAA
TCCGACCCACTATACGCCCGCGGACGTGTTCGGACGCGTCTGCGGAAAGCGTCCGCCGGC
GCCTCATATGTTGTGTCGCACATCCACGTACCTCAATGCCAAGCCTCAAATCCATGCAAT
TCATGCACCTCAACTATCCGAAACAAATTGTCTGAATTCAATATTCGAAACAAAACAAAG
CAAATCATAGTTTAACAAACCGGACATGTCAAAATGAAATCAATGTCCGGACGAGAAGGG
GTGTTGTCGGATCACTGGCCAGACGCGGCCATCCATGCCACCTGCTCGTCCTGCTCCGTC
TGGGCAGCCAGCTCCTCCTACATCCGGGCTGTTTGTTCTGCGTGCATCCGGCATGTCTGC
TCCACTTGCATCCTGGCCGCATGATCCGCAATCGCCCTCGCCGCCTTCTGCACCTACGGT
TGTTGATCTTCTTCTTCTCCGCAAGTCACTTCTTTGTATGCTAATCCATATGGGTGTCGT
CCGCCAAAAATGATCTTGGCATCCTCCACGTCCCTTACGAGTTGCAACCTCTCCTTTTCG
AGCTCAATCTCTTCAAATATATTGGCCTTCTCGAGTTCCCATTTGATCGCCGCCTCCGGT
TTCTCAAACTCGATCTTCTTCCTCTCAATTTCCAGCTTTTTCTTCGCCCTAGCCCGGTCC
CAATCCATCTTCTTATTTTGCGCATCCAGAATGGGTTTATACTTCTCCTCCTTGTTCTTC
CTCATCGAAAAAATGCCCGTCTGAGTGGACGACATTTTTATAGCTGCGGCGTCACGGGCA
ATTCGTGCCTTTTCCCACTTGTTTCCCGTGACTTGCCAGTTATCCTATGGCACGGTGGCT
CTTCCATTCATGACGATAACATCGTCCTCTTCATTATCCAACCCAATGGAATGGTGGGAG
CTTGATCCATCATTCTTCTTCTTTCAGGCCTTGAGATTGGCCACAACTTGTGTTCACTTT
GGTTTGCCATTCAATATGATCCAACAATGGCTAAAAGCAAATGGCTTCTTCTTCACCTCA
TGATACAAAGTGGCCACCGCCGCCATCTAGCAAACAACATATGTATGAGCACAAGAATTC
CCACACAAGAAGCATATCCAAATGACAACAACATGAGGCAATTGAGCTTACGTGAGTTGC
CACTCCTATCCCACTTTGTGGGCATTTGATCTCTTGTGTGTAGTAGACGACGTACTTATT
CACATCCCCTTAAATTATACCCCATTAACGTTGAAGAGATGCCATATTGCGGGTGGTCGT
GATAGGATGCGGCTCCACATACTCCTTTTGTTTGTGATACTCCTTCCAAATCTTCTTCCA
ATGCGTGTTCCCCTTTTGCTCGGTGTCGCATATTGGATCCATTGAAAAGGGGCTAATGAA
GATCCTTGATTCAAGCCAGGGCATGATGGCTCGCATCCGGTGCTCAAGCTGCCGCCTCTA
CACAGTTGTGCTCACCATTGACACACCGGCCTTCTTGCTGATGAAGAAAGATGACGAAAC
CTGGCGTTGGCATGCTATATGGGTCATCTACATTTCAGGGCACTACATGCCATGTCATCC
AAAAGCATGGCACGCGGGATGCCATTGATCGATCGGGTTGACAAGTACTACGATGGATGC
GCCCTCAGCAAGCAGCACCGTATCCATTCCCGCAGGCAGCAGCGTATATGGCCGAACAAG
GCTTGGAGCTTGTCCACGCTGACTTGTGTGGTCCGATCAGTCCACCCATCTTGGAGGTAA
CACGTACTTCTTGCTTATAGTTCACTTCAGTCGATACATGTGCTTGGCCGTACTGAAGAC
AAAGGACGAGGCATTCAGTTGCTTCAAGAGGATTCAGGTTGCTGCTGAAACTGAATTAAG
ATGCAGGTTGTGTGCGTTCCGGTCTGACCGGGGCACCAAGTTTAATTCTGGTGGGTTCGT
GGAGTACTGTCACAAACTCGGCGTCAAGCACTATAGGAGTGCACCGTATTCGCCGCAACA
AAATGGCGTCGTGGAACGGCGGAATTAGACTGTCGTGGAAATGGAGCGATGCTTACTGAA
GAGCATGGGCATGCCAACAGTTTTCTGGGGAGAGGCCGTGAGAACAGCAGTCTACATCCT
CAATCAATCTCCGACATGCAGCCTCGACGGTGTCACGCCCTACGAGGCATGGCACAGCCG
TAAGCCCAACATGCAACATTTGTGCACCTTTCGTTGCACGGTACATGTGAAGAAACTAGG
TCCAGTAGTGATAAAGCTCTCTCGATCAATGCCAATGGTCTTCATCGAATATGAGGAAGG
GGCCAAGTGCTACCAGGTGTCCAATTCAGTGACCAACAAGCTTTAGGTAACTCGTGATGT
TTTATTTGAAGAAAGTAGGCCATGGAACTGGGACGAGCCAGGCGAGTCCGCAGCGCCGAC
GTTCACGGTGGTCTATACCACTGGACCCGACGAGCACGAGTTGGATGCCCGGAGTACCTC
GAGCCCGACGGCGAGCAGTGGATCGGTGTCACCCTCTACTCAAACTTTGGGATCACCCCA
GTAACCTGTGACGCCAACCCCGGGGAGTTCGCGGTCACCCATGCCGCCGACTTCTAGGTC
AGCCGAGGTAGCGTACGTTGTATCAACACCAGAAACCGGCATGGGCTGGGTCACGCCACC
GTCACAAGATGATGCACGCAACGTCGACTCTAGTCCCATACCCGCGGCTCGAGTACATAC
TCAACGACACCAAGAGTGAGGCGGTGCATGAATCATTTCAGCGTTGCCTGCTCTGTCATG
AGGAGTCGGCCAACGGCGAAGATGCTCTGAAGCATGCTCCATCGAAGGCAGCCATGTATG
AAGAGATGTGTTGCATCAATGAGAATCGGACATGGAAACCAGGGACGAATTTAGGGGGGC
GAGG
