Contig Data
morexGenes
Links



Map Locations of contig_76536 (3241 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_76536

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77643 2 946 bp None Available Available LOC_Os08g15460.2, FRAME:-1, EVALUE:2e-52, 13108.m01652 protein preprotein translocase subunit secY, putative, expressed
MLOC_77642 1 379 bp None Available Available None





CDS Structure of MLOC_77643






CDS Structure of MLOC_77642






Contig Sequence (3241 bp)

>contig_76536 3241 assembly3_WGSMorex_rbca.fasta
GAGGGAGATACGACCACGAGCAAATAACTGAGCGCACAGGGGCTCAAACTCCTTACGGAG
TCGAGACAAGAACTCGTACACACGATGAAACTCCAAATCAGCCCGCACAGCCTAGCAGTA
CTAACAAGTACGACAACCAACAGTGCGGAGAGAATCAAGCTGACGCCAGATAGCAGAACT
CTGTGCATAGAAACCATCAACAGTAGAGTCACCCTGATGAAGAGCATGCTCCTGGCGAAC
CGCAGACAAGTATAAGGCATCACCAGAGGGCTGATAGCGCTGACGGAGACGGGTCCACAT
CTCAAAGACAATAGGAAGGCCCAGAAACTCAGAAGCAAATTGAGGCAGAACACTAGCAGT
GAGAACGGCTGCAGCGCGAGCATCATCATCGGGCCACTAGGTGTAAACAGAGAGAGCCTG
ATGATAAGTAGAAAGAGCCTCCTCATAAGTCGAAACATGCTCACCATAAGCACTAATAGC
GGCCTCATCAGCAAGCTTAGTTGCATCCTTCGTAGCCCGAGTAGCATCCGCTGGAAGAAC
CGGTGGTGTCGGCGGAGTAGGAGCCACAGGAGGAAGCGGACATGGCGGTCTGGGGACCTC
GCCAAAAAGAACGCCCCAAAGACGAAGACCACGCATACGAATGCGCATGAAGCCAACAAA
CTCAGTGTAGTTGGTACCATCAAAGATCATCAGACAGCGAGGAACAACAACATAGCCTGA
CGAAGAAGGCATTTTTTTTACCAGTCAACGATCAAGAGAACAGAGACACCCGCAGCAGCA
GCGGCTGGTCCGGCAGGAGCGACACCCGCAGCAGGCACGAACAGCGGCCAAGCAGGGACG
GTCCAGGGCGGGGCGATCCGATCTGAGGTGCAGCAGGCTCGAGTTGAAGACTGGGGCGGG
GAGATCCGATCTGGAGGTGCTCGAGCAGAGGACAGCGGCTAGCGGCAGGAATCGGCGAGG
ACGGCAGCAAGGACGGCGGCTGGCGACGGGATCCAGCAAGGACGGCGGTCTGGTGACGAG
ATCCGACGAGAGACGGTGGCCTGGCGACAGGATCCGATGAGAACGACAGGCAGGCGACGT
TGAGCACGGAGCAATGGTGGCGTTTGACTGGATCGGGGAGAGGAGCCGGCCCTATCCTGT
GATACACACAGCAGAAGGGCGGGTCGAACGTGGCCTTGACCTGCAAGGGGAAAAGAGCAG
GCGTCGAGGGCCAGCGGCGACGAACGACGGCCACGGAGGAGAGTGGCAGCGCGGAGCAGA
TCAACAGCACGAGTTGCTACGTGCAAAAAATTGACCTAGCTCTAATACCATGTTAAGCTT
CATGCACTAGCCAACTCAACCAAAAGTTCGAACTTATGGAAAAGGCTAGTGCAATCCACA
TATACTGTAACACTGTTGTTTCGGAAGGGCGCCGTCATACTATATTGTTTTTATAGATGA
TTTCTCTTGGTACACTTGGCTTTATTTCATGTCTTCCCGTAGTGAGGTTTTGTCCATGCA
TAAGTGTTTACTGCCATGTTCCCAATATTCCAAATAACAGTTAATTAACTGCTATTGCCC
CCCCCCCCCCTCCCTCTTGATACGAGAAACTGCTATTTGTGTCCATTAACTGGGAGGGAC
AGTTAAGAAGTCTGACAAGCCGAGGCCGATTAACTGGGAAGCAGTTTTTGGCCCAAAACT
ACTCTCCTATGCCAAGAACAGAAGCACTACTCTCCCATGTTGTGTTGTTCTGTAAATGCT
GATGTACTACTGCTGCTGCTGTGTGCCCTCTTATGTGATGTACAAGTAGTACTGTTGATG
TGCTGCTCTCCTTCCATGTTAGATAATGATGTACAATTACTGCTGTTGTGTGTTGTTGTT
GCTGCTGCTCTTCTATGTAGATCTAGACATCATCAAAACATCAAGGTAACACTCTTCATT
GTTGCTATGTAGCCTAAGATTGCATATTCGACATTCAATACAATGCATGAACTTATCTTC
CCCGTCGCTCTCTTCCGGTTACACGTGTTGACTTGTCTTCCCCGTCACACGTGAGAGGGG
GTGTTACGGTATATGTGGATTGCACTAGCCCTTTCCATCAGTTCAGACTTTTGGTTACGT
TGGCTAGTGCATGAAGCTTAACACATACTAGTCTTTTTAAAAGGTTTACAGCTGAGCTAT
ATGGGATACTACCTTGCCAAAATGTTTAATACAGTACCAGAACAATTAAGACTTATAACC
ATACAAAGACACATTCTCATCAACAAAGAACTACTCTTCCCCACATAGCGATTGCATAGA
ATCAGTTATGCAGTTAGCCTAATGAAAAGCTACCACGTTACAAGAGTGAGCAATTGAAGT
ACATAGTCATGCAATACTCCAACATTTAGACCAAAAAATGCATCCTTTCTGATGGAAGAG
AAACAACTCACTGTTTTAATAAAGGCAGCTGTATTTTTTCCTGGCCGCACAAGCGGTATT
GACGCACCTGTTCGCTTCAATTGCTCACTAAGATCATCAGGATCCAATTGAAGAAAAGTG
TAATAGTAGTTGAAAAAGGCTATAAGCAATACATTAGTTGGAAGGTAAAAAGAACCTGCA
GTAGACAGTTAAAAGAATGAGATTATTGTAAACAACAGGTGCTTTCTGGCATATTGGTTC
TCCTCAGAATTAATCAAATTTCAAACAAACTAGAAACATTCAGTTTACCTCCTGGAGTTA
GGGCTATGGCAGCCTTTTTAAGAAAATCTAAGCCAGTGAAACGTGCCAAAGTAGCGGGTA
AAGCCAATGAAGATGTAGAAAATATGATAGGCATGACACCAGAACTATTGACCTGCTCGT
AATGGATTGAAAGGTAGGTTACAAAATAAGTTAAAAACATGAACACTGTGAGTGAAAGAC
AGAACAATGTTAGCACAATTGTGAGTATTAGCAGTTTGATCTTATTCATTTGCGAATGAA
GAACAGAATACATTTTTTGCAGAGTCCAAGATGCTCCAAATCTTGATCGGTTCATGTGAA
TGAATAAATGAGTGAATTCCTCATGCCATGTTTCATGCATGTGAGATCTAGAGAACTGAG
CATTAGTGATTGTCTGCTGCTCCAAGCCAGCCAAATACGACTACCCACTGGAGTGAATAT
TGCAACCAAGCTTCTTGCTTCTTCTTTGATTAAAACCCAGGGGTGCCTCTGTTAGACCTT
TCAGCCTGAGCATTGATAGTTGTGGATGACACTAGGAGAGTTGGGACAATTTTCGTTGGT
T