morexGenes - Barley RNA-seq Database

Contig contig_76326
Source Contig contig_76326
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_76326 (8276 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_76326

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77595	2	1246 bp	MLOC_77595.1	Available	Available	LOC_Os05g36260.1, FRAME:-1, EVALUE:4e-131, 13105.m03810 protein soluble inorganic pyrophosphatase, putative, expressed
MLOC_77596	2	705 bp	MLOC_77596.2	Available	Available	LOC_Os01g64690.1, FRAME:+3, EVALUE:7e-53, 13101.m06970 protein LSM domain containing protein, expressed
CDS Structure of MLOC_77595

CDS Structure of MLOC_77596

Contig Sequence (8276 bp)

>contig_76326 8276 assembly3_WGSMorex_rbca.fasta
GAGAGAGAGAGAGAGAGAGAACGTCGTCTTTCTAGTACTATGGAACCATAGGTCCTAAAG
GAACCACTCACACATGACAATGGAGGTACCAAGGTTGATGAAGATGGCCTCCCCAATGAT
TTCACCCTTTCGACAGAGTACTAGAAAAGCGCTCCGGCTGGGATCATTGTGGAACACACG
CTTGCCGCGATGATAAAATAGTTTTAGGTCTCATCCCGAGGGTTTTAGCTTAGAGGCTCA
TGTCAAATGCTTAGGTTCTAAAGTTATTTTAAAAGGGACAAGGTTTCTTACTAATTACCG
TCAGCACATGAAACATTGGTATGTTCATTATGTTTAACATATGTCATCCGGTACATCTAT
TGAAACTATAATTTTTATATTAGCTCAAGACTCGAAGAAGAAATTTACCGAGTGCGCGTG
TCGTTCAGTTTTCATCTATTTTAATCTGCCGCCATCAAATTCACAAGTAATTGTCCATTG
ATTGTCCCTATAGTTGCTTGCTAATGTGATCCATAGTGTTTCTACTTTGCCTTGGTACAC
ATAATTGACACCTTTTCCCTACCACAATAAAATGTTACTAAAATTATTTGATTCTTTACA
AGTGTAGTTTTCGTTACTTTTTCTTCAATTTCATCACCTTGTTACAATTATATGATATAT
ACTCTTATGGCATGTGTTCTTCTATGTACATTTCCTTTTGTTATGTACAATTTTTATCGG
CGTTTCAAGAAGGAATTATACATAATGGGTCAAGAAACAATGATAGGTCATTTAACAATG
TGTTCACATTTACTACTATAAAAAAATTATGTAGGATTGCCAAAGGTTTGTAATATTTTC
CAATATTTGGATAAAATTATTCATATTTACCATGTATTCATTCTTTCTTTTTGTCTGATA
ATGCAGGCAACAAGAATATAATGTTGTTATGCTAACATGATTCTTGGTGACAGTTAAGGA
AACAATTACACTTTTTGTTGATGTTCGTTTGCATATAAGACCTTTCTTGGTAAGACAACG
AAAGCTTCTATATGTACTCGAGGGACATATGGTGATTAAGAGGAATTACGAGAATCATAT
TCTTTTTTATTTTAGTGTGTGTTTTTAATCTAAATTGTCGAGTCACAAGCACTTAACTTT
ATTTCTTTGAATATTGTGTGTGATTTTGGCAAAACTGTTCATACTTTTCCCGTACATGTT
TCCTTTGTATTGCTCTAACATTTGAACCCTTCTCTATTCACTAGGGACGTGTGGAATCAA
TCATAGTGTGTGTTGTATAGAGAGCCACATTTTGGTCTATGTACAAACTTATGTCCCTTT
ATTGACACCATATTTTTTCTCGAAAATGAATGTTTAATTGATTTATTTAATACAAAGTGT
AATAGATTGTGATATCTATGGTTGTTTCACTTTGGTATTGTCACGTGATACCAATGTTTT
ACTACTAAACTATAAATATTTGTGCTTCATGCTTCATGAATTCCTCAAACATAGGTTTCC
TCAAGAATATTTTGTTATCTGGACATCTAACTAAAGAATTGTTCAATTTTTTATTTTTTA
GCATCTATTTTTTGAAGCAACGCGCGTGATGTTATCTAGTTATAATCAAAGGTTCAGTCG
AATATCATTTGCGTACTCAAAGGGATCCATATGGATGCCCATGGTTTCGCTATCAATCAT
TGAACGAAGAAGTTTTGTTCATGTCTATGAGTGACCGAACCTATGGGGTCACGAGCTTAA
GGTAATTATGATCTGTTGAGTGTTAGTGGGATGGGAGTAATGAGAACTTATTTGTGAATT
TTTTTCATATTAATATTTAAAATAGTTTCTAGAGAATCCGGAAGTGTTTCGACGTCACCG
AAAAGGTTTCGAAGACTATCGGACAATATCGGGTATCAATGAAAAATAGTATATAGATGG
AAAATAATTTTTCAAGATGTTAAATTAATAATGAAAAATTTGTTAAAATAGTTAGGAAAC
TTTTTCATTTAATTTAATATCAATGGGCCTTAAAAGGCCGACACACGGAAGGTAACTTTG
GGCCACGAGGGCCCAAGTGAATGTGGTGCCCCCTTTCCCACTTGGGAAAGTAGGGGAGGC
CGAATTGGAGGGGGCTCCTCCCCCTCTTGGCCGGCAAAGGGGAGGGGACTTTCCCTCCCT
TCCCCTTATGGCGCCCCTCCTCCTCCCCATCACCTATATACTAAAGGATTTTCATCATTT
TGTACACACAACTTTTGAAGTCTCCTCTAGTCCTCTAGTTCTAGCTCTAGTTGATCCTAG
TTGGTCAATTAGAGCTAGACCTAGATCGTCTAATCCTCATAATTATAAGATCAATGTGGT
TCTAATCTCCTCCATTTAATTCTTCAGCGACGATTAGCCCTGGATTGTGAACTGATGTCG
GATCATGAAGACCATACGCTTGCAACCAAGTAGAGAGGTCGTGCTTTCGGTCTTCTATTT
GAAGGATCGCTTGTGGGTGGTTCGTGGGATCATTCATCTACGGTTCGAGGGTCATGAATG
ATCTATACCAACTCGTCTGTTTTTGTTGCAACTCGGAGTTGGTAACAATCCGATCCCAAT
CATTATTGTATCTTCACAATGTTCTTGGTTGATCGTACAGAGATTTTTTTTGTTTTCTAC
TATGTTTCCCAACAAAAGTATCATAAGACATGAGGTCCACACATCAGGTGGGCCCAGACG
AGCTTCATATACAAGAAGTTACTCGGATGTCAGACATGTTATTTAGTCGAACGACATCCA
GATCAACATCACTTGGATTACACTACTCGTCTACTCGGATAACCATCAACTACTCTGTTG
TGTAACCTACCATCTCAGAAAACCAGTCCATGTCAACAATTTTATTTTTCTAGAAAAGTC
CATGCCAGCGTTGCTAGAGCTTCGAGTAGGAGGGACAAAAAATGTCTGCTACTGAAAATA
TAGTGTCACTTTGTTCGATTTTGAAGTTCGGAGACCAGAAATGATCACTCTCACAAGGAG
CCAAAGACATACTTGTCTTGAATATGAATGTGAGAAATTTTGATATTATTATTTGTTCAG
TAAGAACTGAAGATAATACGCGAGCCAAACCACAAGGTCTTGAATACAAATTTGAGATAC
AATATAGTACCACAGTGGCCGAAAAATATGGCCAATACAAACTAATGCGAGAATGTGGAA
ATACAAACTCGCGTAAAGTGGGTGTTTATCAGATCCCAAATGCTTCGAGGGGATCTTCTT
TGCTTCCCACCATAGGAGGAAGGGCAAAGGAAAAAAATATAAGGTAATTGTACACGCTCT
ACCGCCTTAGGCTGTGCATAATGTACTCGGCGTACAGATCCCTGAATGAAAAAGAATCAA
AACAATTTACGTCAACATAAGTCGACGCCATCAATCCCCGAGGTGTCTCAGAGTTTAATC
ACAAGACTGTAGTATCCTCCAAAATGGTGAGAACTTACATGGAGTGCTGGATGGCAGCAC
GAGCGTCGTCCGCGGGGAGGAAGTCGTTGACAGCCACCTCCTTGTTCTCATTCTTCTTGT
CTGAAAGATTTCACCAACCAAGAATCAGACACTAGAAGTCTGAAGATACTACGTACATGA
AAAGGTCAGTGGGAACGCGAGATAAGGCAGGCAATGGTATGCGTACAGTCTTCGAAGAAG
CGGCGGATCTCCTGCAGGCGATGAGGAGAGAGCTCGCTGAGATGGTTCAGGTTGTGGTAC
TCGGGGTCGTCTGCGCAGACGGCTATGATCTTGTCATCCTTCTCTCCCTGTTAGATAAAT
TAAAAGAGAAAGAGAGTATGATATAAATACTCTATAAGCTTAATTAAGGCCAAAATGGTG
GGTGGAAAGTTGACTTGTGTGCTTGTAGAGAGATGAGGGGATTGGTTTAGCGTGCCTGAT
CGATCATAGGCATGAGGCCGATGGCCCTGGCCCGGAGGAAGGTGCCGGGGAGGACTGGTT
CCTGGTTCGACACGAAATGAAATAATCAACACGCAGTTATCACAAGACAAGAAGGTTCGA
TAAATGCAGACCGTGATGCCTTGACAGGGCTGTTAATTTGCACTTATCATAAGAGGACGA
TGATATGATTGGAGCATGGATCGGTTCACACACCTGCATGAGGACGAGGACGTCGATGGG
GTCGTTGTCCTCGCAGAGGGTGCGTGGGACGAAGCCGTAGTTGTGAGGGTACACCACGGA
GGAGTAGAGGATCCGGTCAACCTGACAGAGACGATGACGATCCCGACGAGTCAGGAACGC
ATTCATGCATGCCCGATGCAAACAGCAGGTGAAAAGGAGGTTTGAGAGGTGAAGGAAGGA
GTGCAGAGTGCAGACCTTGATCATTCCGGTCTTCTTGTCGAGCTCGTACTTGACCTTGCT
GCCCTTGGTGATCTCCACCACCACGTTGAACACCGCCGGAGCTCCGGGGCCTGCACCGCC
CAATAATCCACGCAAGAGATCGATCAAACCAATCAATCAGCGTCGGACGGACGGATCTGA
GAGGAAATGGAAATGGAGAAGGGGCTTACCGATCTCGAGGTCGTGCCACGGGTGGGCGGC
GACGGACCTCCGGGAGAGGGAGGAGAGGATCCGCTCGTTGAGCCGCGGCGTCTGCCTCTT
TGGCTCCGCCGCCTCCTTGTCGCCGGCGGCCTGCCCTTTGGCTCCGCTGTCCTGGCTCAT
CCTCGATCCGACCAAAAACGACGAGGCTGATTTGCTGTGAGCGGGATCGTTGCGCGGCTG
TGAGGACGGGATGGCCGAAACGTCCGTGGCCCGGCGTGCATATATAGGAGGGAGAAGAGG
AGTTGGCGGGGCGGGGGGACGAGCGGTGAACGCGTCGTCATCGTCGAATGCATGCGGTGC
CGTGCCGTGCCGGTGCGAAGCTTCGGCCCCGCGCCCCGAACGGATCAGATCACACCACGC
ACCAGGCACGCAGCACCGTCAAAGAAAAGGCAAATAAACTCGGCAACTGGCTGGCAGGGC
AGAATCCCAGCACATGCGGAACGTGCATGGAGCAAAGCATCCAGTCACTCGCAACGCACC
AGGCACCATCATCGCCATATATAATAAGATAGGGAAGAGAAAAAAGCTGCCACTGGCACG
ACGCTGCGGTCAAATTTTAGTTATTGAAGGGAGGAAAGAAACTGGGCATCGCGGCCACAC
GCCAGCGTGTTCACCCAACGTGCCGTGATCATCGGACGGACGGTTTTGCCGCCTTGGATC
TTGGATGGAAGGAGTGACCCACCAACCTCCTCCGGTTTCTTTGGCTAATCCATCTCATTT
CGCATCAAGGAACATCGTCAAGGACAGAGTGCAGCGAACCGTGAACGCGCAGCAATTGTT
GATAACAGATACAGTACGTACTACGACTCAACTTTTCCTCCACCAACGTGTCTACGGATG
AGCAGGTGCCGGAATCAATACATGTTGACTACAGTACAGTGTCTTTGCTTTGTATCGAAA
TACATGGATGATCAACTCAAGCTATGCAGTGTAATGCTCCAGGAAACGTGTATAGGCTGA
TGCAGTGACATCCAATACGCGTTGCTGCCGATGCTCATCCAATGGCAGTTGTTCACAACC
GGCTTCATACAGTTCGCAAGGGCGGCGAAACCAGTATCACGCCATCTCCTCGGACAAAAA
GGTAGGGGATGGTGCGCTTGCTAGTCTGGAATCAATGGAATTAGCCAAAGCATTAGTAAA
TCTATCACATATCATCAGCCAGATAGTAAATCCATTACATATCATCAGCCAGAAGTATCT
GACAGCATTTTGCATTGTTGTGTTACATTACCCCTAGATAATGGAAACAATGACCACACA
GATTTTAACAAGTTGATGAAATGAAAAAACAAAAAACCAGGTTTAACGAAAGACGTTGTA
GTAAAATAGAATGAATTATTGTATACACTGTAAAGTGACCATAGTGGCCTGAGCAAGATA
ATATATCAAAAAAAATATGGCAGAAACTTTCAGTACATAAATTTCAAAACCCTGGCTACA
ATCACTGTAAACAAAACAAAAATATTGGTGCTATGCTTACTATGCAAGACAACACAAGTG
TTGCCATCAAAATACAACCAGTTAAGATGGCACATTTATGAACACGGAGCATTTTATACA
TTACTATGCAACTGAGATTGGGTTATCATTAAGCAAAACCATGGTAATAGTGCACATGTG
AGTGAGGAAAGCCATGGTTCATATTAAGCATTATCGTGGTAATCGTGTCAAACCCTCACT
CCAGAGGGGCTCTCAAAATCTTTAACACAAAATAGATAAACATACTGGAATAACTAATAA
TTTCGACTTTGGAAAAACAGTAGTTGAACAGTCTGAACAATGAACAACGACATCATCGTA
TAGTTTGAATTTGCAGGAACATGGAGGTACTTACACGAACAATCTCCTCATAAGTCTCAT
CGTCAATTTCTATAGAGGTCACTATCTCTTCTACATCTCCCAGTATCATATTGAGATGTT
GATCATATGCCTGGATCAAAGGAAGAACAAAGGCAACTTAGAAATAGAGTATGTCAAATA
GTGGCCACCTTGATGTCCCAGGGTCAAATTTCCTAACTGTTGGTACAATTGAATAACAAT
GCATGAAGAAAGTGTATGATCCATGGAGAAGCATCATACAGCCCACAGATCTTTTTTTTG
CAAGTATACAATTGTAGTGAATCAGTAAAATGATAATAATGCCCAGCAGGCAACAAGTTA
ACCTCTAAAGCAACCGGAAGTCTTATGTTGAGGAACACCACTACAGCACGACGGGCAAAT
GCCGCGACGCCCGAAAACACTGGTTCGCCATCCAAGATATCAATGTGACCCTGAGCAGCA
GAGTGCACATCTGCTGCATCACGAGATCAGACAGCGCGAGCTGCCATCGGGTGTTCGTGC
TGCATTTTTTTCCATACATTTAGATGCCGAGATGATTTTGCCATTTAGATGTTGGGTGTT
CGTGCTATGAACTCAGATTTAAATACTGCAACCTCCATCAGGAATTAACTGTCGCTGAAA
TGAGAGTGTATCTAAACGCGTTTCAGTGTGAAGATACACTCATTTCAGCGACAGTTATTT
ACAATGCAATATATGTGGTTCCACTAACCGGAAGAACTTTCAGCGTATCTTCCTCGGTAT
ATTTAGATGCTGAGATGATTTTGCCATTAAGGTCCTGCATATTTCAGAATTGAAACACTA
CAGTTCAATATGTGTGGTTCCACTAACCGAGAAAAGTTTCGGTTCAGCATGTTAAGCATT
ATCTTAAAGGATACAGAAAGCTTCTACGCACATTTATATCCAAAAGAAGGGTAAAAGGAT
AAATCAAGCGTATGATTCTCTACACAGATAAATCCGGGTTCTGATGTCTCACAGCTCAAC
TACAAGTAGATGGGAAACTCAATTTACACTCCACAAGTCCACAACAAATTCATTTCTCTA
CGAATTAACATCAGCTGTTAAAACGCAGATGTCAGCCCAGCCATTTACGGTCCACGTAAA
CAAGATCCTCCACGCGGCCAAGCCCAGGCGGCGAAAGCTACCAGATCTACAGCAGAAATT
ACGAAGAGGGGCGAGGAAGCATACATGGAGCTTGCCGCGGAGCTCGCGGTCGGAGCGGAG
CTTGACGTAGATGCGCTCGTCGAGGCTGAGCCGTATGAGATCCAGCGGCTCCTTCACCGC
CACATCCTCCTCCGACGCCATCGCCGCCGGCTGCTACTCCCTTCCACTTCTCGCTCCCCC
AAACCCTAGCTTCTGAATCGAGCTCTGTCACTTCCGCGCCGTTCCCTTTTTTTTTTCCTC
GACGGGTCGGACAAGTACAGTGCACAACCTAATTGGGCTTTTGGACTTCTGGGCCCATAT
TGGTAACAAGGAGACCCTTTTAGTCATAGACTTTGCTGATAGGTCTAAAATTCCTTATCT
TCTATTCTTAAATAGTTGCAACCCACTACCTATTTTTCCTTCTCATGCAACCATGCCACA
TCATCAAGGCATGCATTTAGTCACAAGTACTTATTTTTCCTCATATAACCATACCACATC
ATCAAGTCATGCATATAGTTACTCTCTTTAGGAATCAAAGTAGGTTTTTATTAGTGTGTC
ATTAGTTTTGCCACACTATCGATTTTTCTAGTGAAGTTTTCACTACTAAAAATGTTATGG
TTGTCCCTTCAAAAAAAATGTCATTGTTGTGTCACGCTCAGAAATGCTATTTTCACCGTC
TAGTCAAAGCACGTTCAGGCCCGGCCTTGAGGGGGAGCAGAGGGGGCGGCCGCCCC