morexGenes - Barley RNA-seq Database

Contig contig_76199

Source Contig contig_76199

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_76199 (2592 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location

Predicted Genes from contig_76199

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77568	1	194 bp	MLOC_77568.1	Available	Available	None

CDS Structure of MLOC_77568

Contig Sequence (2592 bp)

>contig_76199 2592 assembly3_WGSMorex_rbca.fasta
TCCGCATCGAGATGCGGAGGCGGGGCGAGGAGCTCGGAGACTGCGGAATCGGCGGCGAAG
GTGGCGAGGAGGGCGTCCAGGTCGAGGTCGGCGTCCATGGGGTGGGGTGGGGTGAGGTGC
TATTTTGTCACGGTCTCTGGTTGCCGGTTGTTATATAGCGGACGCTTGTGCTTCGGTTAT
TTTGCTTCGTGGGGAAGGAGGAGGATGGTTCGTGGAAGTCGACGGTGAGGGGTACAGCAC
AGAGGGGTTGAGTGGGGCCCACGCGGAGCGGTGCCGTGGCCTGGCCAATCGGAGGGACCG
GAGGCGCCACGTTGGCTCGTTGGGTTTTCGTGGGGGCTTTGGGCCGGTCTTGCTGCGTTG
GGCTGCTGCCTGCTGAGATGGACTTTGAAAGGACTAGTAACTGCACGTGTTCACAAATAT
GAAGTTTAAGTAAGTATAAAAATTTGAAATCATATTATTCGATGACCGCCTTATTATCTC
TAAAGAAAAGAGGAAAAGGGGAATACAAACCTATCAATTATCTTTTGTGGATGTCATGTG
AAGTTCGAGCACAACAAGTAGAAATCACAATTGTATAGGTACATGTTAGAGATGAAGGAC
AGCCGACTGGATGAACAACTTCTTAATAAAGAAGATAATGTCATAGCCTATTTAATCTAT
TTTATTGTAAAAATGGAATCAAACATCCGATGAAGATTTCGTAATGTCTAATTTTCTTGG
ATGATCTTGGAAGGTACATATAAACATTGTCCAAGTGAACATGGTGGAGATACAAACTTG
GAGCGAAGATACAAAAAACAAATCAGTCTTGAAAAAAAAAAAAGTTCCTTCTTGGATTCA
TGCTGCTTTTCATCTTTGCAAGTTGAAGAACTGATGATGGCGGCAAGGCCACCCATGGGA
GTTACAGCGGACACCGCCTACGAGCTGGAAGGGTATATCGATAACGACGACAGTGCCGCC
CCACTCACTTTCTTACAGCTTATCCTAAAGTAGAACTACGGTTCAGAGATATTCCTATTA
CGTATATTGTTGTAGAACATGTCGAAGCCAAAAACAAATCAATAAAGCATTAGATTCATA
ATGAGAAAATACAGAGGGAATTTAAATTTTATAAACCAGCTTAGTTCTGGCAAGATTAAA
CATGAGCTAAAGATGTCACCATGGTATCAACATATTAGCACCGGAGAAAGTGTACTACTA
TTGTAGGATGGTAAATTGTACAATAAGTAATGACGTGAGCAGATTAGTGGCTATAAGAAT
TTCTAGATCATAGTGGGCACGCGTTGTTGTGCCCGTCCATTTTCACAATAAGAAAGGTAG
GTGATTTAAGAAATATATAGCACTGTGAAATGTAAGTTACATAAGAAAATTTGAAGATAC
AATGTGCAAAGTGGATATAAATATTCATTCATAATAAATACAATTATGTTTATAGAATGG
TTCGAGATAAACTGAGAACATGTAATTTATAATGACATGACCAAGAAAAAACATTGTACC
TCAAGGTTAGTACTTTAGCCATTCTCTAGGGGCAACATAGCACAGATAGGCAAGGAAGCT
TATCAAGCGTAAAGCATCGTGGTGTGACACTTGAGAACCCTAGGGGTTTTGTCTTCAGCG
TTCAACCATGTAACTCACTTTGATATTCAATAAAATGTGTCACAAGTCATTTCCATTTTA
AAAAATAGGTTGCAAACTTATGGGTGAAAAATACAGGGAAGTTGTCCAACGCCTTTCCTC
CTCTCCTTGATTGTAATGCTTTGGGAATCTATGCCCGTCTATGTCCAAACTGGGTAGTCA
GCTGCTATAGCATTTGCAAGGCCTCCCACACAAGCGCTGCACCAATAACATAAGGTGCGT
TTGTGCCCATCCATCACGTAGAAAGAACAATATAAATATTTGAGGAAAAAATGAAGTGTG
AAAACATCAGATAAGGTTCAAAAACTGGGAATTAGTACTATGCATATCTTAATAAGAGGA
TAACTAAATACTTAGACAAGAACGAATACTACTAACTTGTTTTTTGGTTCTAGAATGATT
TAGATGACAACTACAGGCAAAAGAAAAAAATTCTTAATGCTAGGAAGCTTTCATTATTTC
TCAAATATCAAGCCGGGTCAGCTGCAACATATTATTAACTTTGAGTTCAACAATATATAT
TAAATGCCAATACTAACAACTGGCCAAAGAGGCATGCTATGTGTTATAGACCTGAATCCA
ACTTAACATCTATTATATACACTGAATCGTCAACATCCGCATTGGAAAACAAAAAAATGA
AAAATATATACAAGCTAATGGAGAACAGTAAGAGGCACCGTTTAAAAAAGGAACAGCAGG
AAGGCCCCAGGTTTGCTTATGTGGATAATAATCTGTAACTGGAAATAAGAAAAACTCATC
ATCGTGAACCTGAACTGAACTATTTACACAATCATGTTTCTTCAATCGGAAAAACTCATG
GCAAACACTTATTAACTGAAACAGAAAGAATATTATGTAAAAGAAAAATCAGGTTTAACA
ATAGCCAATTTTGTTAGAAGAAGTTGAGGAAACAGAGGAGTGTTCATTGCTGTCTAAACA
ATCAAGCTTGGA