Contig Data
morexGenes
Links



Map Locations of contig_76123 (3408 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_76123

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77548 4 1423 bp MLOC_77548.3 Available Available LOC_Os01g37790.1, FRAME:+1, EVALUE:5e-16, 13101.m03843 protein expressed protein





CDS Structure of MLOC_77548






Contig Sequence (3408 bp)

>contig_76123 3408 assembly3_WGSMorex_rbca.fasta
TTTTGCAACAAATATATGGTAGGTCCTTCACAAAAGAACTCATTTTAGGCACTCGAAAAA
TGGAAATATTGATTTTTTTTGAAATTGTAAATAAGGTCTAAAGAATATGAAATTTGACAT
GGTATTGGTTCATCATTTCTAGAAGGTGTGAAAAAATATTTGAGAAAATTTGCTAAATAT
TAACATGTTTATTTTATCAAAAGTAATAGGGTAAACAAATACAATTTTGTTTGCTGATTC
CCTATTGGCTAAAACCTTCTTCTGCGAGATCGATGACGTGGGAGGGCAGTCAGCCCCACT
CTAGTTGATCTCAGCCGTCAAAGCCAACGGATCCAACGTCTCTCAACGGATCCAAACGCT
ACGCGCCCGCCCTTCACTTTCTAAACGCAAAAAAGCAAACCCAACCCTCGTACCACCCAG
ACCGTTCCACCCCCTCCCCTCATCTTGTCTCTCCCCCCCGCCTCCGTATACCACCCACCG
CCGCCACCCCACCCACCTCTTATGGATGGAACAAGCCCCGGCGACCCCAACACCGGTGGC
GGCTGTCGGCACCACCTCCCTCTCCTCCCTGGCCAGAGATCCACCTCCTGATTCCTCTCC
AATCCCGCCGCCGCTGACCCCCAATGGGTTGTGGTGGCCCGGCAAGGCTGCCTCACGCCT
CGAGGTCCCCGATGACTGCCTCGTGCTACCCCGCTCGCCCGCCACCCCCATCCTGCTCCT
CGATCGCTGCGAGGGGACTGCCTTCATGTACGCCACCCTCCCTTCTTATTGCTCCTCCGC
TCTCCACTCTGTCTGACCCCTCCCCCCTTCTAGCGAATGGTGCAACCTAGAGAGGAGCAA
GCGCGTCAAGCCCTTCCGATGCGGGGAGGCCGACCTGGCCGACCTCATCCACCCCCGCCG
GCGAAAGCTCATCACCACCCTCCCTCTTCGGATATACATGGACGGATGGGGCGACAACAC
CGGAAACCCTATCCCCTCGCCCACGCATCACCCATGATGGGGACGGGGCGACGACGGCGG
ATCCGCACGCACCTTCTCTCGGTGGGCACTAGGGAGGGGACCGACGCATCCTGCTGCGAT
GGCCGACGAATGCCTCGTCCTTCATCTCCGGCCATGGATCTCCAACCGTGGTTGCTGGGT
GTCCATGGATCTCTTCTCTGTTTCTTCATCTCCCCTCCATCTCATTACTCGTGCGTTTAT
TTTGTGTCCTATCTGTAGAAAAAGAAGCTCTTGCTGCTGCTGCAGGTGGACAATGAAGGA
AGCCCTCATCCTCATGCCTGTTGCTGCTGCTTGCTGAGTTTGTTTGGTGGACATCCGATT
CCTGCTGCAGGTGGAATTTTTTGCCGTACTACTCGAGTTAACTCAAATTAGTGTTATTTG
TAGTGCTCAATTTGTTGTATTACTTTAGTGGAGTACCAGTGACATTACTTGCAATATTTA
TAGCTTGGTGTAGTACTGCTTGATCTACAATTAGTGCAACATTAGGTAGTAGTGCTTGAA
CAAATGTTAATATTGTATTTAAAAAATGTTGTTATGACTATTTTATTTGTTGTGAATGGA
GTTCTTGATGATTTAGATTCTTAGAAATAAGATTGTTGCTTCATATCATATTGAAATTTA
TTCATGCATGTGTCGGATCTTTCTGGACATTATGAACATGAAACATGGCCTATATATTTT
TTAAGTGCACCCACAAAATAAGATTGTACCTTCGTTAGAAGCAAAGTGCAAGTTGTATTA
GAAATAAAACAGAAACACTATTCTTCTTTAATTTATGATGTTCGACAATTTAACATCATG
ATGAGAATAGCTTGTTTTTGTGCCTTGTTTCTATTCTTGATTTGTATCGTGTAGCTCTTA
AAAATATGGTTGTTTCTTTTACAGGATCTCCATGCCTAAAAAAGTTGAAGTGCGAAGCCC
TGAAGCAAATTGTGTGAAACACTACTTATCCAAGAATGCATATTATATATTGTAATAGTA
GGCATATCTGCTTTGTAACAGGCTAGAAAAATTATAATATACTACCTTCGTTTTAATTTG
ACGGATTTCACATGTTCTCTCTGCTCTATTTGAAATATTGATATCGTATGCAATTTGAAA
ATGTGTGAAATGAAAACCTGACCAGGGGCACCTCTTATGAAAGCAATATAACTAATTTTG
AACTTCTTGACATATGGGACAAATTATGAGAAGAATATGACAACTGGGACCTGCACACAA
AAAATAATGGCTAAAAATTGAAAATCAGTGGAGTAAAAAGGCCACAACCCAAAAATAAAA
GGGATAGATTGTGGACTCGGACCATCTAGCTAACCAAAATTACTAGGAAAATACATTATA
AATGGGCTCAATTGTTGGGCTCGGCCCATGTTAAACACCGAACTAGACCGGGCTGATTCT
TATCAACGACCAATCCAATTGGTCGTAACTTTGCCACGCCAGTTTGCCACGTTGGATCCA
ACATGGCATGGGCAAAGAACCAACGACCAAAAAAATTGGTCGTAGAATCAACGACCTATT
CGTTTGGTCGTAAATGTCTTTGACCATTCTAGAAGAATGGTCGTTATAGTTCATTAGAGA
CGGTCAACTTTTGGCCAACCCATTTTGGTCGTCAAAAACGGAAATTGACGACCAATCAGT
GACCAATATTGCAGGTCACAAGTTGCCATATTTCTTGTAGTGGCAACAAAACTTTTTGAT
GACTTTTTTGGACAAAAATAAGACCTCGAAGATTCATAGAGAGACCAAAGGCCACACAGG
GTGGCGCCAAGCCATCAAGGCGCGCCCACGACGGCGGTCGCGCCCTGATGGCTTAGGATA
ACCTCCCAGCGCCTCCTCACCTAACTCTACCCCTATAAATTCCAATATATTGGCAAAAAC
ACCACAGAGCAACCCGAAATATTTTTCCCTCCGTCGCAAGCTTCTGTTTCATCATGATCC
CATCTGTAGTCCTGTTTCGATGCCCTCCGGAGGGGGATCGATCAAGGACGACCTCTACAT
CAACGTTGGTGCTCTCATGATGATGTGTGAGTGGTCTACCACAAACCTACGGGTTCGTAA
TTAGTACTGTAGGACCGAAATTATGTCTAGAGGGGGGAGCTGATTAAACTACTTGACAAG
ATAAAAATTTAGCCTTTTCCCAATTTTTAGTTGAGGGGCAGATTTGGCAGTTATGGCAAG
TCAAGTACACCCTACACATGCAGTACTAAGAGTGTACCAGCAGAATGTAAAACATGCAAG
TGTAAAGGAAAGGAGTAAGGTAGGGAGATCAAACACATGAGGTTTACATGGTAATTTTTG
GCATGGTTCCGANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTCAACCCATGA
AGGGTAACAACTGCGAGTTTCCACGGTGGGCTCCACCCACAAGGGGTC