morexGenes - Barley RNA-seq Database

Contig contig_7602

Source Contig contig_7602

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_7602 (2425 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_7602

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77524	1	509 bp	AK375978	Available	Available	None

CDS Structure of MLOC_77524

Contig Sequence (2425 bp)

>contig_7602 2425 assembly3_WGSMorex_rbca.fasta
TAAAATAAAATAATTCATTTCTTCAACTTTCCTTTCATCGTATTTGATTTTTTTCTAAAA
AAATGCCATCTCATTTTATATTTGATCCTGATTTTTTCTACGCTCAAAGTTCTCTCGTGG
GTGTTTCTCATCAAAAATACATTTTAAATCAATATACAACAACAACAACAACAACAAAAA
GAGCAACATTGACAGGTTAGAGAAACAGAACAACTCTGCTCTTCAACATTGATCTGTAAT
CACTTCATTTGTTCTCTCCCTTCAAAAAGTTTTGAATTGTTTCTCTTAGTTCTCATGTGC
CAAAACCTGTTCGGGTACTGTCAGACTGGTACCAATTTTGTTGATGTCGATTTGATTGTT
TCAATCAATATTTTGCATCAAGTTGTTTGGTGATTACACTGTAGTTGCATCTTAAATGAT
TGTATGGCTAATCATCTACTCCCGCCGATTCAACATAAGTGTTATTGTTTTAGTTTAAAT
TTGAACTCAAATCACGACACTTATTTTTGATCGGAAGGAGTACATCAATGCCGAGAATTG
GCCCCCAGCCGTCCGATACAGTCGCGCACACCCTAGAGGCAAAGCCAGGATGAAAATCGA
GAGGGGGCAAAGAGGTGCACAATATTTTTCTAGAAACGTGTATACGAACTAATGAATAGA
TCATTTAGGAAACCGACCTCACAAACAAACAGATTAGAAAGGAGCCAGACGGGCGGCACG
TAGGTTTCTTACCGGCTTCGCCCCCATGCAACAACCCCACCCTTGCGGTTACAAATTCAT
GTGACAACCGTCGTAGCTCTGGTGACGACGATTGAAGCTCGCTGCCGCTCATCCCCGACG
ATGCAAGCTTGTCGGGCGCACCTGACGCTTGCACCAAAAATGAAACGAGTGTTAGCTCTC
TGTATCCGAGTGACAAGCTTAGTTGCTGTGCCTCAGCCAGATCCTGCATTTCCATCATGT
CTAACATAACATTTCTTCTGGAAGTTTAGGTGCAGCCACTACTCCTTGTAGGATAAAATG
TAATTCAGCAGTAGCATTCTTCCCGCATTCGTGTGTTGGGTCGTACTTTTCCCCGCGGCG
AAAACAGAGTGCATTGGCACGTCTAAAATAAATCCATGAGCTGCTTATCCTTCCAAAATT
TACCAGTACCAGAGAATTGGTCGTCCTAATATGGGTAGTGCACTGAAATCTAAGACAGAA
GCTCCTGGAACTGGTGCTGATGCTCTTCCAGCCACAGCGCTGCGTTGCTTGAGTGACAGT
AAGGTCTTGATGCATGTGTTTCGGATGAAATCGTACCACGCGGCCCTGGGTCGATACCAA
CTGTCACGTCCCCCTGGGTCTTGGGAGAGGTTCACCATGCCAGACTTAGGAGAGAAGAAC
ATGAAAGACATAGACGAAGACTTCAGTTTATTTGATTCATCAGACGTAGTACTAGATTGT
TTCAGTTACAGTACAGTCCAGCACACAGCTTATAAGCTCCACACAACCGCTGGCACGATA
GCTTTAACTTAACACACACTTGCGCCATCTTATTTACGGTCGTCCACATCGGGTGGCGTA
CCCCTGCGATCTAGAGTACGTTTCTTCTTCTTCCCCGGACGTGACATAGATTCTCTACTT
GAGGCACCAATTCAGCAGCAGAATCACGCCGATCACCAAGATGAAGATGAAGAGGAAAAC
AGTGAACACCACAAATTCCTGCAGCAGTTCATCTCAACGGGTCAGTTCAGTTCAGCAGCG
ATACCAGAATGCAAGCACATGTTGAAACAAGAACGCGTATAAAACCCGGAAACTAGTACG
CGTATGAAACCAGTATTCTAGACCTGGCAAACTGAAATTAGTACGCGTATAAAACTAACA
TTGGCCTTATGTTTAATCCATCAAGCAAAGTAATATTTCACGAGGTACTCGTAAGGCCGG
GGCGTTGCCTCCTTTTCTAAAAAAAACGAGGTACTCGTATCGTTTGCTAATTAGTACTCC
CTCCGTTTCAAAATAAGTGATTTAAAAAGAACTCAACTTTATACTAAATTAGTTAGTATA
GAGTTGAGTCGTTTTTGAGTCACTTATTTTGGGACGGATGGAGTAGTTTACTGGCAACAA
CATAGAGAAACACGAATCACATTTAAGCGAGGAAGGAAAAAGTAGCAGCATCGATATATC
TCGATAGAAATAAGTTCGAATCGCATTACCACAGCTCCATGCGGTGACGCCGCCTGTGCT
GGTGGATTCACTGGTGGGTTCACTGGATTGATGACCACAGTCGCTGCAGGAGCTCTCACC
ACCATCTGCAGCAGTTGAGCTCAGCATGTAAGTACATGTTCCACCTCAAGCAGCGAACAC
TAAAATTGGCCTACATGTAGGCTGTAGCTCGAATCTGAACGCCTTATGTTAATTTAATTC
CATCAAGCGATTGTCACAAGCTACT