Contig Data
morexGenes
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Map Locations of contig_7549 (3009 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7549

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77428 4 2433 bp MLOC_77428.4 Available Available LOC_Os01g39260.1, FRAME:-1, EVALUE:0.0, 13101.m04007 protein OsFtsH5 FtsH protease, homologue of AtFtsH4, expressed
MLOC_77406 2 2263 bp None Available Available None





CDS Structure of MLOC_77428






CDS Structure of MLOC_77406






Contig Sequence (3009 bp)

>contig_7549 3009 assembly3_WGSMorex_rbca.fasta
AAAGGCCAGCCTAGCTGGGCCGGGCCGGCTTGTACCAGCTGGGCCTAAATGCCCAGTAGC
TTTCTTCTTTTTTTTTTCTTTTTTTTTGCTACTTTCTTTTATTATTTTCTGCTTTATTTA
ATTCCAGCAACTATTCCCTATAGAAAAAATGTGTGACATGGTCCAACACATATCTTACAA
TATTTTGAATGACCAAAAATAATTGGGCCCATTGAAATATGTTTGGATTTTTCCATGGAA
TTTAAGAGCATTTTTAAATGCAAAAATGACTCTGTTTTGATGATGGGTCCACACCAACAT
CGAGGGTGATGTTGATTTTCTTAATAATAATTGTTTTGGATTATTCCACAATTGTGCAAC
AGATTTCGGATGCTGTTTGGGGAATTATTTTATTTCCATATAATTCAAGTGGCTTTTTAC
GTGGAATTTGAAAAGAGATATGAATTTCAACTTGATCATATCCAATTTAGCAAAATGATT
TGTTGTTGATCATGGTCTCCTTGTCTTATCTTATGTTACTCCAAACATTTTTTTCATTAT
TCCACTGAATACATTTGTTTTTAATTTTTCAATGGAGTGCAAGTAATGTGTATATTGTGT
GTTTCAATATTTAAAATTTTAATATTAAAAGCAATTTATAAATTATTCGGTTAGTCGTGC
GTTGCACGTGCATGCTAACTAGTACAGCTAAACGAAACCTTGAATGAATCAACAATGATG
CAAAGAGGTAAAAGTGGTCTCAACCACAAACATTATGCGAACAAACAAACAAGTCTCGAT
TTCTTCCAAATGCACGCACAGCATGTGAAAACCTCGCAAAATCTGACAAGAAAATGACAG
CAATTGAAATGAAACCCCACTTGCCTCCCTCTTCCTCCCGGCTGGCAAAAACTTCAGACA
CCGCCTCTATTTACACACCATCAACAGGGCGGTCTTTCGCTCTCTCGCCGGGGGTAGATG
AAGAAGCAGGGGGATGGTCGCCTGATGCACAGGCAGCAGTAACTTGTAAACTAGTGGTAA
CATGGTAACGTTCTTCGTGAGTGCCATGCACTGCAACGAATGGTCTTCTTCTCTCCAGTG
CTGCCCCCGGTCACGCCGAGGACAACGACAAGCGGCTGGACCACGCCGGCGGGGGCGATG
GAGGCTGCTTGCGGTTGCGGGCGTGCGCCGCCTCCAACTCAGAGGTGAGCATGTCGAACA
TGACCTGCACGTCCTGGTACCCGCAGGTCTGCACGTCCTCGTGGAGCTTCAGTATCCCGC
CGCTGCCTGCATCACAGTGCGCAGATTCAGTTTCAGATAAGCTTCTTTTACTTTGCTCTT
CTTTTGAGACGAGTATCAGATGTGTTCTTTGTTAAAACAAAAAATCATCTCTAACATAAG
GTACATTGACGTCTCAGTCCCAATCAAATAATGCTACAAAAGTACTTATTGCTTTCTAGG
CTCATAGTAACAGGAGCTTCTGCTCCATCCCATACTCATGAAAAGGCACCACAAGTTACT
TCAGTCCATCCAAATGGACGGAGGGAGACAAATAGAAGGCCTCTCCCATAAGTGATGGAA
ATGGCCTACCGGTCCAGCAGGAAAGATCGATCTGAGTGGTCCTAAAACTTGCACACACAC
ACACACACAAAAAAAAAAATCTGATGGAAGATCGATGATGCCCCTTGGTGTTTGAAGCAT
AAGAATCCCCCCACATGTATATGTTTCATGTGAAATTCTTGCAAAAATACTGCGTTCGAA
TGAAATCCCTGTCCCATGGCTTGATACACACAAAGCATCCACGAATGCCATGTGAATTAA
GATGTACCACCGGCAAATTTGTTTTAGTGACCGCGAAGACCACCAATTTTTTTTATAAAA
TGGAAGCAACGTAATGCGTACCTCAACAGACCAAGCAGTATTGAAATCGAGATTTTGCAG
TACTAAATGTTACTCGCTCAATTTCATAATATAGTGCGTCCGCGCTTTTTGAAATATAAA
TTTAACCAGCGTGGTCTACTGCAGCGGGAGCAAAAATTATATCAATGAAAACTTTTGAAA
TATAAATTTAACCAGCGTGGTCTACTGCAGCGGGAGCAAAAATTATATCAATGAAAACTT
CTTTCGAGTACGAATTCAATGGTATACTTTTTATTTCCGCCTGTCACGTTGGTTAAATTT
ATGGTCAAACATAAATCTCAAAAAACGCAGATGCACTGCATTATGAAACGGAGGGAACAG
TACTACCGGCGCGGCTACGGACCGGGATCCCGGAGAGCGAATTTACTGCACTTAATTCCG
TAAATAATACCTACTGATACAAGCATTATCTCCTGTTCTTTGGTCTGCATGTTGGGGACC
TATTTCCCAAAAAATTTCTAATAGCAGAAGAGCGTGTAGCAGTAAATCTGGACCGTATTG
AACTACTTCTGTTTATAATTTTGATTTTCTGTTGAGTGCGGAAATTTCTCATTTTCTTCT
TCTTTGAACGAATACAGCATTATATTGAGAAAGAAAAAACAACTTTCTCTCCATGAACAA
ATAAAAGGGCCCAAGAAATCAACGACTCCGGTGAAATTCGTTGCCGAACATGCATCTATG
CGTCCCGTCACCTCCAAGAGACAGTATGACTACTAAGAGAGAAAGAAAAACAAGTTTCGT
CTCGATAAACAAACAAAAGGGCCCAAAGAAATCAACGACTCCAGTGAAATTCGTTGCCAA
ACATGCATCTATGCGTCCCGTCACCTCCAAAAGACAGTACCAGTGACCTACGTTTTTTCA
GACCCACATTTCATCTGTTTATTCTTTCAGAAAACAGTAGATGAAACAAAACGAAGAGGA
AACCTTCCGCCATCTAGCGCTTCTAATCAAGAAACCAAGCGGATCGTAGACACATGCGGG
TGGACAGCGGTTGAGTTAGAGAGGAGTGCGGGGAGGGAGACTGACCGGACTTGCTGCCGC
GGAGGACGCGGCTGGAGACGGCGGCCCACGCACGGCGCGCCCGGAACACGACCTTCTTCC
GCCAACACG