Contig Data
morexGenes
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Map Locations of contig_75214 (2586 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_75214

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77342 2 420 bp MLOC_77342.2 Available Available None
MLOC_77343 2 1160 bp None Available Available LOC_Os06g42380.1, FRAME:-1, EVALUE:1e-20, 13106.m04433 protein retrotransposon protein, putative, unclassified





CDS Structure of MLOC_77342






CDS Structure of MLOC_77343






Contig Sequence (2586 bp)

>contig_75214 2586 assembly3_WGSMorex_rbca.fasta
CAGAAGGTGCACTTCAGACGATCTGCGGTAACTTTTTTAGGCGGTTGATGCAGCCCTTGC
TGTAGAAACCAAGGGCTGTGTAGTGCAGAATAGCTTGTTCCCCTCCGTAGGCAGTAGATT
TTGCTAGTCTTTGAGCACCTTGCAACTGACCCACCCAAACCATGGCTAGTCCTTCCTTGT
GCGTGTCTCTGAGCTACATTCTGATGTATGGGGTTGTGTCACCTGCTGATCTGCAAAAGT
GAGACTTGAGTGACCAGTAACAACGGTTGTGGAGTGCTTGTGACCAAATTTTCATTCGGT
TTATGTAAAAGCTTGACATCTGAATTTGATGTTGTCTCAGTAATCTACAGACTCTGCTGC
TTTTTTTTTTAATCTTGATATACACGGTGGCATCTATGATCTGAATTCTAAGATTACCCA
TTTATCTTTCTTTTTTTGTTGAACACATCCATTTATCTTTCGTCAGCAATTAATAAATTT
TAATTACAAGTAAATCGATACTGAAGAAATTTGCGGACAAGGAACATATAGCTAAAACAA
ATCTTGTATTGATGATATTAAACCTGGGGTGGTAATATCAAATATGATGAGGCATTTGTG
TTCGAGGAAATGATCTGAGTTGGCTCTTATCTCAGAAATCCACAGTTGGCTGTTTTCTCG
TCGAAATATAATTGTGATATGTGGTGAGATGCTGTTGTCTAACGCTGCCTTGTTCAGTGC
CTGATGAGTGTGCCTTGGAGAGAGAACATCCCTCTCCCCGGCATCGGTCGTCGCCACGTG
TTTGGCTGACGTTATGGATGTGCAGGCCTCGCCCACGCGGCTTGTTTGCGTTGTCGATTG
TTATTGTAGCCTAAAAATTTATCAATTTCAAGGGCTTCATAGGAGGACGACTTACAGTTT
GCATTGTTGATTGGAATTGTACCCTTTCTTAAGAAATCTATCAATTTCTTACAGTTTGCG
TTGATTACAACTCACTCGTCGGCCCGTTGCTCAATACTGAAGAAATCCACAGAAAAGGTA
AAACAAATCTTCTATTAATACTTCCTCCATCACAGTTTATAAAGTATGCGCGTGTACTTA
GATCGTCAATTTGACTTATATAAAATATATTATTTAACATAAAAATTANNNNATTAAAAA
ATAGAACATCTAAAATTTCTAATGATATATTTTTTGTAATATATGCCTCTCATTAAGTTG
GTCAAATTCACGACCTAGATACACGTGCCGGACTTATAAACTGAAACTGTGCACATACAC
ATCAGTTGGTTAATGTTAACATCAACCTTGCTGTAGAAATCAAGGTACTCCCTCCGTTCA
CTTCTCTAAGACATTTTAGGCCGGAAATTGCTTTTGGAGGCCGAGCTTCATGAAGGCTTT
CAAAAGAAAAATTCAAAATTCATGAAAATTCATATTCTTACATTTTAAAAATTAAAGAAA
AATACAGAGATAAGTGAGGGCGTAAATTTTCAGAAAAAAATACATTAAAATGAGGTCTGT
ACACAAAAGAGAAATCTGGAACTTTTTAACACATCATACTATTCATCATCCCAGGACATG
ATTTTTTTTTAAAAAGATTGCAGATCGTATTTTAAGATATTTCATCCTAAAAATTTACAC
ACATACACATAACATCCTTCTTTACTTGTGAGCTAATAGATGTTCAGCTACGTTAAGTGT
ATCCGGGATTACATCAACAGAAATATTACAAACTGAATGTTCACTATTGTGAGCTAATAG
ATGTGCAGCTACATTCAAATCACGATGAAAATGCTTGAAGATACAGCTATGAAGGTCAGC
CACCAGAGACTTTATATCATCTATCACCAAGCCCAACAAAGATCGAACCAGGGCATCAGA
ATGAATGCGTTGAAAGTCACAGAGAGACAATCAGAATTAAGAAGCACAAACCTGTGACCA
TTATCTCTGGAAAATGTCAAGGCATGCCAAATGGTCACTGCTTCAGCAAGTTCAGGTGAT
GTTACCCCTTCAAAACGTTCATTGCATGCCAGCACACAACGTCCATGGTGATCACGGATA
AAAACATAACCCAACGAAGTCTTGAGGTAGAGGACCCACACGTGTAACAAAAAAAAGAAA
TATGTGGAGGCGTGACGGCGGCGGGAGAGACATGGATGCAACTGCATGTGATGTTGCTTG
CGATCCAGATCGCAGCCCCTTGTACTGTCTTCGCCCCAAGTGAGGTACTCATCCCCCTCC
CCTCCCCTGGAGATATTAATCGTTGTATATAGGAAGGTACTGAAAAACAAGAAAGGCCTA
CGAGGAGAATCTTTGCATCAATTTGTAACAAAGAAGAAAAAGGACTAAGCAATCACTAAC
TAAGAAAAAAGTACTCCCTCCGTTCCTAAATATAAATCTTTTTAGAAATTTCACTAGGGG
ACTACATACGGATGTATAGACGTACTTTATAATGTAGATTCACTCATTTTGCTTCATATG
TACTCCCTCCGTCCCAAAATAAATGTCTCAATCTTAGTACAACTTTGTATTAGAGTTAGT
ACAAAGTTAAGACAGTTATTTTGGGAAGGAGGTAGTAGTCCCTTGGTGAAATCTCTAAAA
AGACTT