Contig Data
morexGenes
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Map Locations of contig_7521 (3539 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7521

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77340 4 1598 bp MLOC_77340.1 Available Available LOC_Os03g62490.1, FRAME:+1, EVALUE:2e-25, 13103.m06898 protein prohibitin-2, putative, expressed
MLOC_77341 1 291 bp MLOC_77341.1 Available Available None





CDS Structure of MLOC_77340






CDS Structure of MLOC_77341






Contig Sequence (3539 bp)

>contig_7521 3539 assembly3_WGSMorex_rbca.fasta
GCAGCCGCCTCCGCAGCAGCCGCCTGTGCCGCCTGCGCCGCCTCCGCAGCAGCCGCAGCA
GCCGCCTCCTGCGCCGCCTCCGCAGCAGCCGCCTCATCCGCTGCCATCTCGAGGGCGAGG
AGCTCCGCCTCGGCCGCGAGGTGGCGGGCCTCGGCCTCCAGGTCGGAGTCGTAGCCGCAC
ATCACGACGTTGCCCTTCATGGTCTTCTTGGCGAGGTAGCCCTTCCTGTGAGCCTTGCCG
CTCTTCCCGCGGGCCCCCATCGCCGCCGCCTGCGCCTCGTCTCGTCGCCGGGTCGGAGTC
GCGCGTAGGGAGGGAGAGGTGGCGTGTTTGGTGAGAGCGATGGGAGGGAGCGGTGTGAGC
GTGGGGGATGGAGACTAGAGACAAGTGGGGACGGTGGTGGGCTTATATAGAGCTTTGGAC
AGCTAATCGCCATCCGACGCTTGTGGCTTCTTCTTGGGAAATCGGTAAACTTTCCCAGCC
GTTGGATCTTGATTAGGCGCCAGCTAACCATCCGCTGCTCCGCTTCTTTATTTCCTTTCT
CCGCCTCGTCTCCTTGGGTGGGTCATTGGTCCCTTCAATTTCTCCCCCAAATCAACCGAG
AACCCTAGCTAAACCCCAGCCTCCGGCGGGCGAGCGCGCCGGCGGGGTCGATACCGCCGG
TCAATCTGGGCGGCGGAGCGGCGCCGCGCTCTTCCTCGGCACCAACGCCGCCTGCGACGT
CGAGGGCGGCCACCGGGCCATCGTCTTCGACCGCCTCGAGGGGGTCGAGGGCAAGGTAAC
CAATCGCCGCTCAATCTCGCTCCTCGGAGGCGGGCGACGGCCCCGATTTGTCCGATTCCG
GCCTTGATGTTCGGTCGCCCTTGGGCATGGCGCTGTGCTTGTAAGGTGGGTGGAATCTGG
TACTGGGATAGGTGGGTGGAATCTGGTACTTGTAAGGTGTTTGCCACTATCATTTCTGAG
TGTCCAGTTGCAGTAACAACAGCTATTATGGCATACATGGTATCCATAGAGTCAATTTTC
GTCGACTCATTTGGATTTTGATGAAACCCATGTCTGTTGATATATGAATTCCTACTGCAT
TGTAATCTTTATATGCACTGTCTAGTGTCTACTGCTCTGTGAATATGCATTTTAGCTCAT
TTGCTTTTAATCTATCTGCAGTGGTCACCATTATATATTGCCTGTGAATAATCATTTCAA
CTCATTTTTTCTTAAAGCGATCAACAGTAGTCACAATTTTTCTCCCTTCATGATCATATA
TTTAGACCATCTACGACAAATAGCTGATGCTGAACAAGTTATTTAATGCTGACTATGTGA
ATTTGTTTGTTGTGATTCGCTTCTTTTCATTTCTGAAGTAGCATTTACACTCAGCTCTAA
GCATATACTTCCACTGTCCGAAATAAGTGTTGCTGATTTAGTACTAAATTTGGACTAATT
AGTACTAAATCAGCGACACTTATTTTGGGACTGATGGAGTATTTGACACCACTTAATAAT
TTGGGCAGGTGAGAATTGGTCTTCGTGTTCTTACATGACCCATGCCAGAGAGACTATCAA
CTATGTACAGGACCCTCTGGGGGAGAGCTACAATGAGAGAGTGTTGCCTTCAATCATTCA
TGAAACACTCAAAGCTGTGTTTTCCCGATACAATGCCAGTCAGCTAATCACATAGAGAGA
CGTACAGGAAGATTCTTGCTTGGAATATAGCTTCAACATGTTTAGTGTATGTACATGTTT
TCCATGCTATAGCAGATAATAGCTGGTCTTGCTTGGAATATGTTACTGACTTATCCTTTA
TGTAATGGCAGGCTGTGAGCAGGAAGATCAGGAAGCTTTTGACAAAGGCGAAGGATTTCA
ATATTACTGTGGATGATTGTCCATTACTAGTCTCAGCTTTGGTACAGAGTTCACTCATCC
CATTGAAGCCAAACAGGTTGTACGCAGGAAGCTGAGCGTGCCAAGTTCATTGTTGAGAAG
GCTGAGCAAGACAAGAAAAGATTAATTATCAGGGCACAAGTAAGCAAAACAGGAGCACTA
GAGCCTGACTCTAGTAATTTTTTACATTTGATGTGATTGATGATTGCTATGTCCATAGTT
TAGTTTTAGACTTTCAGTGGTACGTTTGTATGACTGAACATAGTTTCAGACTTCCAGTGG
TATGCTTGTATGGCTAAACATAATTTCAGACTTCGAGTGGTACGTTTATACGACTGAATA
TAGTTTCACAATTCCAGTGGTATGTTTATACTACTGACCGTAGTTTCAGACTTGAGATTT
TCTATGTTAATAGTCACTTCCAGTGGTAGTCAGTATAGGCATATTGCTAGTGTTGTTTAT
GTCTTAATATATTTCTACATTTGCTGACTTTGGCAGCACCTTGGCGGATGAGCCTAAGAC
TGGTTGTCTTGGTACATTTCACTAGTTGAGTTTCAGACCACCTGATCCTGACATTGATCC
TTCTTTCTGTATCTGAACAGAGGGAGGCAAAGAGTTCAGAGCTCATTGGTCAGGCCATCG
TGGACACATCTGAGCATATTCCGTGGAATCTGGTACATGAAAAGGGTTTTGGCATTGTCA
TTTCGGAGCACATTCTGTAACTGTAGCCTGCACAAGAGGGTTGGACCTTTCTGAAGTGTA
TACCAGTTTGGATAGGTGGGTGTGGTCTGGTACATGTAACGTGTTTGCCATTATCATTTA
TCAGTGTCCAGTTACCATGTGAACAGCTGTTATGGCATATGTTGCATCAGTGCAGTCAAT
TTTTGTTTACTCTTTTGGAATTTAGTGCAACGCATGTCAGTTGATCTATGAAATCCTACA
ACATTGTAGCCTATGGACCGTCTAGTGTCAACTGGTGTGTTAATATGCATTTTAGCTCAT
TTGCTTTTAATCTATTAGCTGTGGTCACCATCATATATTGCCTGTGAATAAGTATTTCAG
CTCATGTGCTTCGAATCTGTTGACAGCAGTCATAAGTTATTATTTTGCTTCATCATTATA
TGTTGCCATGACGATTTAAGATGATTAGCTGATGGTGAACAAGTTACATCATTCTGACTA
TGTGAATTTATTAGTGGTCATGCACTTATTTTCATTTCAAAAGTAGCCATTCCACTGCAG
CTCCTTGCATATATTTGACACGTCTTGATAATTTGGGCAGGCGAGAATCGGTCTTCGTGT
TCTTACACAACCCATGCCAGAGAGACTACGAACTATGTACATGACCTTGGGGGAGAACCA
ATGTTTTCGAGTCGACTGTCGTTCTGGGTAGTGACTCTTGACTAGTTGTTACTAGTCTAG
ACTTATGGTCGACTAGTCGACATGAGTTAAGCAATAGGTACAGGGGAGCAGCAGCAGCAA
GCCAGCAACCAGGGGAGGAGCAGCAACCAGCTTGCGGCAGCGCTGGCCGGCAGGATTGTG
GGGCTGCGGCCAAGGGGCAGGATAGGTTTGGGCTGGGAGGGGGGGGGGGGGGTAGGCAAG
CAAATAGAAAAAAAAAAGAAAAGCCGGGGCCAGCTTTGCTCCGTTCACCAAACAAACTG