Contig Data
morexGenes
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Map Locations of contig_75191 (5667 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_75191

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77330 2 894 bp MLOC_77330.2 Available Available LOC_Os05g50654.1, FRAME:-3, EVALUE:3e-15, 13105.m05435 protein mitochondrial import receptor subunit TOM7-1, putative, expressed





CDS Structure of MLOC_77330






Contig Sequence (5667 bp)

>contig_75191 5667 assembly3_WGSMorex_rbca.fasta
TCTAGGGCATATTTCCAACAGATGATCCCCTTCATACGACGGACGGTCCTGTCCTGCTCC
CACTTCAACTTGACGAGCCGAGCCTTCTCCTCCGCTGCCTCCTTCGCCTTGCGCTCCGAC
TACTCAACAGCAAGCCGGAGCGCCTTGGCGTTCTTTCATCGGAGGCGTCGAGCGTCCAGC
TCCGCCATCGTGAGGGGTCGGCGGTACATCCAGGCGATGAGGCGTTCGTCCTTGTCGGCT
CCGGCGGCATGCGAACTACTACGCCGCTTTCCTCTCTCTTGCCCGCTGCCTCTCAAGGAG
GGCAACGCGCGCCTCTGATTCCAAAGTGTGTGTGCGGGCCCATGGCGCTGGCACTAGCAC
CCATCACTGCCCGTGTGGAGGAGCCACCGACGGGGGAAGAAGACGACGCGGGGCCGATGC
GAACTGTGCGGTCATGTCGGAGCTGCGAGCGGGCCTGGATGGTCAAGCTCCAGCGTCTGC
GCTGCCCCGGTGCGGAAGCTACGACGACGCTCTAGATGTGGAGGTGTCGTCGGTGTCCAC
CTTGGACCGCTCCAAGGCGATGTGAAGGGCGAGCTTCTCGTCATAGTCGATGTCGGAGCG
GCTGCTGGAGCTCGACATTGTAGTGGATGGTATCGGAATCAGAGAGGAAGAGGAGAGGAC
ACAGAGAAAGAGAGTGAGCTAGGGTTGGGAGCGAGGCGCTTGGAGTGGGGTTTTGTGGGA
CAACGGTGGGGTCGGTGGTGGGTCAGGCATGTCAACTAGGACGTGGCGGATACGGCCGGG
CATGACCTGACCGCCCCATATCCGCCCTAGATTTGGGCTGGATATAAGGGGGTGCCGGTC
AGCCCGGGCGTTTAGGGCGGATTTAAGAGGTCCGGTTGGGTTACGTTTTTCTGACCATTC
ACTAACCGGACGGCTTCTTCAAGCGTTTCAGATGGATATGAAGGGTCTGGATGTAGAAGC
TTTTAGTCTGACCTTTTTTCTTGCAATCTCTAAAAGTTATGCAATCTTAAAAGTTGGTGC
ATGTAACCAGAATGAGGATTTGGGGCAGGCTCATTGATTTGGGGCACGCACATTGTGGAC
CGCTGATCTGCAACGGGATCCGCAAATTGTGTATGTATTTCATATATTGCTTCGCGTATA
TCCACTCGCTTGCTAGCGTATATCCAGTGGTGGAGACGGGTCCACGCAGCCTGGGCCGCT
GCATGATGCTGAAGCATTGAAAATAAATTTTAGTTCTCAATAAATCTACATTTTAAACTT
GATGCTCAATGATCCAAGAAAATAGATTAAACATGACAGAAGCATAAATATTAATATGGA
AATACGATAAATTACCAAATCAATTGATTATTTTGTTGGTGCATCTATATGCGAGTGGCC
TTGAGGAAACGATGCTTTCGAGTCTGCTCGCACCAATACGCCGCCGTCGGCGTAGACATC
CCTGTTGTGGACACCGGTGAAAAGAATCTCTTCATCTTCTATTTCTACAACATAAACCAA
ATTGCAAATGCATCCATTTGAGTTCAATAATACACAATACAATACTTAATTTGCAATCAG
CTTTCCTTCTTCCTTCGTGACTAAGTACAGAATACATAGACACACACCATTTTTTCAATT
AAATTTTGTTCAATGCAGTTCATACACAGAGGTTAGTAGGTTAAATTGCAGAACACACTA
CAAGTACAAACTACAATGAATCAAAAAAAGGTCAAGATGGTGTGCCCCGCGCGGTGGTGA
ACGGCGCAGGGTGGAGCAGGGCTGCCGAAGAGTGCGGGGAAGCAGGGGCCTGCCTGGAGA
AGTAGATGGCGGTGATCGAAGAACGACGACGGCGCCACGGCAGCCAAGCAGGGAGGCGGC
GGCGCGAGCGCTGAAGACGAGCGTGTCCTGTGCCGCCGTGCCTATGAGTCAGATGAAATC
GTGGCTGGTGCTTGGCGTGCGTGCGTGGCTGCATGAATTAATGGCTTTGGGCCTCCTTTC
ATTGGCTCAACCCGGGCCCAAAAGAAAATCTATGTATATACTAGCTGGGAAAAAATCCCA
TGCCCGGGCCTGGGTGACCGGGGCCCAGCTCCACCCTTGAGCGTGAACATCGATTCCTTC
GGTGACTGTAGCTATAGTGCAGCCTAGGCTTGTCGTATTCCTAACGTCGCTGCTGCGTAT
ATCAATACACGTATATTTGTATTCGCATTGTAAAGCTAAAGCATAACATTTGTTACTATG
TGTCCGTCTGAAAAAGGAACAAATGTTTTGAAACGGTTTCTGTAAGAACTGTCTACTTAA
GTACTCCCTCCTTCCGAAATTACTTGCCACACAAATGAATGAAATCGGATATATCTAAAA
CTACTCCCTCCGTTCCTAAATNNNNNNNNNTTAAGAGATTTCACTAAGTGACTACATATG
AAGCAAAATAAGTTAACCTATACTTTAAAGTATGTCTATATACATCCGTATGTAGTCTCA
TAGTGAAAACTCTAAAAAGACTTAGGAACGGAGGGACTAAAATACATCTAAATACATCCA
TTCTTATGACAAATATTTTTCGAACGAAGAGAGTATACCCTTGTACTCAAAGCGTTTATT
ATGTTCTTTCTTTTTGAGAGTACGTCAATAACATATCATATTTTTATAGAAGGCAGAATA
GAGTTTACAAGACGCCAATTCAAATGCGAACATTCTTATTGGGTACACCAACACCAACAA
GTACAATCAAAGCGTTTATTATGTTCTTCTTTCTCACTGCCCGTTCTTTAAGTATACTCT
GCTTCTGTTCTTAGAACTTTTGTGTTCTAGCAGTAGTATTGTAGACGACATAAGGTATTT
GAGGTATTTTGTTTCCAACTACTCGCGGAGGAGAACTACTCAAGCGGCGACAAGGGATTC
GAGACGTATTCTAGAGCTTATCGGGCACAGGTTAGTTGATAATGTATGTTTGATATTCTT
CAATTTTGGAAGTGCGGCGACATGCCTTCACAAGACGTCCAGCGCGCCAACATGCCTTCG
CAAGGGTCTCAACTCCCTGATCATCCTCTCGGCATGGGACATTTGGAAGCACCTTCGACG
CCACAACCCCATCCTCCACCAAGCTTCTCGATGACATTAAGCAGGACGCTAAACTATGCG
CCACAGCCGGCGTCAAAGGGCTCGATTGAACCATTCCTGTAATCTGAACCGTAGCTAGCC
GAGGCTGAGCAACCTCTCTCCTCTGCTCACTCTTGTGCTCTCGTTGTCGCCATTCATGTG
TACGTCACCGAGAGAAGCTACACATCAATGGAATGATACGCGATCTCGCGTATTCAAGAA
AAATGTTCAATCTTATCAAACTTTCTATATGAGAAACGAAGAGACAATTCTTTCGTCCAA
TTTTCAACAAGTCCACAGTGGAATAGCGGTAGATCTAAAAAAAACGAGAATTTTGCAGTG
GTACATAAATATCTAAATTCCTCATGTTTGCAGGACGATCATACCACACATTGTAGCATG
TAGGACTGTAATGACCTCTGTATTTTTCGATCAACAGGGGCCTCGCGCCGGTTCCATTTC
ATAGAAATAGAAATGAAACCATATGACACGGTTCAACATTGTACAACAAAGGCTTAAGCC
AAAATAAAGACAGAAAATTAAACACCTGAGGAACGAGATCCTCTAACATTTTAAGAGAAG
TCAGAGAGAGCTATAGTTCCCTGACATTGCTTCACTAGACACGCACGGTGATTCAAACAC
ATGCTTATCTGCAGTAACCTCCGTACGAGAATTGAGTTTTCAAAGCGAGATGAGCAATGA
CCTCCGTACGAGAAGCCAAGATTCTTAGCTTCTCAGGGTGTATTTGGTAAAGGTCAAAAC
CGCATTATCTCAGCTTCTCAGGCATCACTACTTGATGCAAAGGCATCCATGTTATCCTGA
TGATTGCATAAGAGAGGGAAAAGAGTACCCCCAGGATGTTCTTGCAAGCTACATATCACA
CCGACAAGATACTAAGTTCGGTGAAATATTAGTACCTGAACAAGCAACTATAGTACTCAA
GATTGAGTGCTTAACTGTCAAACTGTGACACCATGTCGGAAGAAAAGGTGGTCTACAACT
CTACAGACAGCCACCTGTAAGGCTGTAAGATTTATATGATCAATTTACAGTCGGCAGACA
GACATATTATTCTGGTATATTTGTGTCTTACTCTCACATATTGTTAGATCTAAATCAGAT
TATCTTCAGACATACAGTTTTGTTTTTAGGTGATATATGGAGGAAAATATACGCAACAAT
GATGTATGATTGTATATATACCCCAAAGAATTGTAACCCTGTGTCAAATAATAACTGTAG
CACAATACAATACTACTTCCTCCCCAACATGTTGTGTGTATAACTTTTCCCCCATTTTAC
CTTTAAGCTTTTTTTCGTGGTTTGTCTCTAATTTAGAGGAGGGAAAGCATGTACAATGGC
CATTCTTAGCAATGCCATATAGGATGATTGCTGATTTGAGTACCATCCCTTGTCCAAGAT
ATGATCTTCCACATATAAAGATAAGACGATTCTATCGATTGTACGAGGTGTCATATTTTC
ATCACACCTTATCTTGATTGATTTTAATCGTCACATATTGTATATGTATATGCACCATTA
ATTTCAAAAGATAACACCCTATGCTTTTAACATGAAATACACAACAAATCATATAAACCA
CACGGCAAGAATCTTATAAACCACCGCACAATTGCCCGTGTGCTTGCTCCCACGGCGACA
TCTCCAATGTCAAAGGGTGAAACAAGAAACACGAACACGTCCTTGAGACTGTAATACATT
CTGGCGGTACAGCTCTTAGCAAAAATCTTATAAACCACCGCACAATTGCCCGTAGCCTAA
TACAGCCATACAGTAGGCTCTCGGTGGCAATAGGGAGACCCAAAATCAGAGCAACCCAAA
CTTCCAAAGAGTAATGAGTAGAAATTATTCAGGGAAAAATACAAAATTAGATCAACTCAA
TACGCGCACAGCCGTGCGGATCCGCTCGGGGAACAGAGCTACACGGGGGAGAGGAGCTGG
GCGAGGCTGGGCTTGGGTTCGGACCTCATGCCGACGAGGATGACAAGGGGGATGAAGCCG
TAGTGCGCGACCACCTTCGCGTTCTTCATCGCCCAAGTGCTCCACTCACGCGCCAGCCGC
GCTGCACACGCCGCGGCCGGCTCCGCTGCATCCGCTGGGGCCTTCCCCTTCTCCATGGCC
GCCTCTGTCAATGGCGTCGCCGAAAGAAGAATGATTTGGATATTGCAGCTTGTCGGTTGT
GACGATGGGAGGAGAACCAGAGGAGGGCCGGGATGCGATGGGATCTGGCTAAAAGGCCAA
CTCCAACTTACTGAGGCTAATTTTTTTTAATATTACACTTTTTATTTTTTTGAAAAATAT
TGCACAGATTCAAAAAAAAAAATCAAATCTATGCCTGCCTCGGCCCAGGCGAAGCGACTG
GAGGCAATCGGCCGAGGCGCGGCCGATAGGTGGCAGTCGGCCGAGGCGCGACCGATAGGT
GGATGTCGGCCACGTGGTGTCCGACTAGTGGCGAAGCCATGTCGACTGGGCTGTCGGCTC
TGCCTGTCGGCCAGGGCGCAACCGATAGGGCTATCAGCCAGGGCGTGGCCGATTACTGGC
CACCCGAGCCAGCCCCTTCCTCCTCTC