morexGenes - Barley RNA-seq Database

Contig contig_7515
Source Contig contig_7515
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_7515 (6514 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location
Predicted Genes from contig_7515

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77318	2	787 bp	None	Available	Available	None
MLOC_77319	4	2966 bp	AK250321.1	Available	Available	None
CDS Structure of MLOC_77318

CDS Structure of MLOC_77319

Contig Sequence (6514 bp)

>contig_7515 6514 assembly3_WGSMorex_rbca.fasta
GGGATGCGCTGCCCCGCCGTCGCCGTGGGTGGCGTCGACGTGGGCGGGGCCGAAGACGCC
CGTGTCCTGGTCGGGCACCCACGACGCGTCCTCCTCGCCGTCACCGGCAGGGATGCTGAC
GGTCTCGTCCGGCAGCACCGTGGCGACGTGCTCCTCCTCCTCCTCCTCGCCCTGGAGCAC
CTCCACGTTCTTGCGGTTCAGCGCCGCCTCCACCTGCGCCCCCGTCATCGCCGCCGCCGC
CGCCGGGCCATGCACGTCCTTGTACGGCTCTTCCTCCCGCCGCGCGCCGGCCGTGGCCGA
GGAGTGGCTCATGCTGGCCCCGTTCCTGCGAGCACACAGGAGACAGGACGACGCCGCCAT
GAATGACTGCCACTGCCTGAGAGTTGTACAGCAAGCAGGGTGAACAAAGCTGGTTACTGC
TGTAGTTACCTGCACGAGGCGAGAAGCGGCGTCGTCCCGGTCCGGCCGGCCACCCGGCGG
CCGGCGGCGGCGGTCAGCGCTCGCGCAGCCATGGTCGGGAATAGATCGATGCGGCTCTCC
TCCTCGCGAGCTCAGTGGAGAAGATCGTGAAGCAGAGAGAGTGTCTGTGCTGTGTAGTGT
GTGTGTGTCTGGGAGTGAGAGCAGAGCGCGAGCTTATCCACTGTGAGCTCTTGAGGCTTG
AGAGTTGAGATGGGGTTCTCTCTTCTTCCCCATGCAATGCACCTCGGTCTCGATGGGCGG
TGGCTTTATTAATGAGTTACTGCCCCCGACGCGGCAATGCCGGTGCAGGACGAGGACGAG
CGGTGGTGCGAGGAATGGCGTGGCGACACGCGGAGCGGCGCCATTGACGAGAGCAGAGGG
TCGGTGATGCGGTGGAAGGAAACCAGCGGAGACACGCACGCAACCGCCCTTTCCGTCGGA
AGAGGACACGCGATTGCTTCCTGCAAACAACTCGGGCATGTAATCCCGGTAAACTAATAT
AAAAGCATTTACAATATTAATTTAATAATATAAACCCTCTTATATTAGTCTGTAAAAGTA
ATGGTTTTGAAGTAAAATTTGTTGAAATTTATATTTAAATAAATAATACTGAGAGCAAAC
CAAATGGTTGATTTGGTAGCAACTATGACAGTTCAAACTTAGCGACCAACAACTTAAGTT
TAAAATTCCGTAAGGAGGCGGGTGAGTATGGAAATGTCTGGATCTTGTATGCTGATCCCA
AACCTAATTACAAGAAAAACTTCAGACATATAAACTTGTATTGAGACATTTTCATTTTTG
CTTTCGGCCACGACGCAGAGCACGTACAAATAGTTAGATGCCGCACCTAAAGCTCATTCG
TCGACAGCACACCGTTTCCCAGCAAATCACAGATCAACAAATGATGCAGAAGTTGATCTC
ACAAAAATGTACCTATTCTTCGGACCCAAAAAAGAGGGGGAACACCTTTTGATCAAATGA
CAAAGATATGACAACGAGCATCACTGCGGGAAGAGGATGGAGACCTCTGGATGAACCATG
AGATGGTGAAAAGCACATGATAGCTGTACACTCAGAGGTCGGCCATCTGGAACCCCTAGT
CTAGAGTTAGAACAAGTGTCTAAAACAAGCGAATCCTTTTTTTGTAAGGCACATATGCCG
ATGCGGCGACGAGCGCAAAGTGGAAGGAGATATTAATTTCTCCTTTGTTATGCAAAGGAG
AGATGACAAAAAGGTTTAGAGCAAGCATGCTTCAGGTTCTCAACAGTTCTTCAGCCACAG
TACCCACCGTGCCTACCCCAAGAATACTGTTTTATTACTGAGAAGAAAATAGCCTTGAGT
AAATATTGCAGCACAAATGGGTAATAGGTCGTGGCAACAGACGTGGCCATTCTAGCCAAA
ATATGTGCGGTATTGGTGAGAAAAAATGGCTTTACAGTAAATGCGTGGCTATTTTGTATC
TACAATACCGCACACGAAGTTGAAGGTCTGGAATCGGTGCTGCGGAATCGGATACCAAAA
CAATCCAGCAGCCAATCCCCGAGGCCGCCTGTTTTGATGGGGCAAAAATGCACATGAAAC
TTCACAACAAAAGAAATCAGTAAAACACAACGAAAGCAAAAACCTGCAGACGACATGGGA
AGCAGACGGCAGTTCAAAATTAAACAGCACACAGCCTGAAATCAATCACTTCACTGGAAG
GTATATGCCGCAGCAATATGCCCAGCTATTTCCATGGGGTAAAAATGGACACAAAAATTC
CACAATTCAAAAGTTCACAACAAGAAAAGAAAAGGCATAATGTGAGGAAAGCAAAGCCTC
CAAACGAGAAGCAAGCGGTTCAAGCGTAAACATGGCACAGCCTAAAATCACCTCACTGGA
AGGCCTTTTCTGGGTGAATTCCGTCTATTTTGGAATGATGAGGGAAGTCATGGGGCATAT
CTTCAGGTTTCAGACCAGCGCCTCTTAAGGTTTGGACAACCTCCTTGTGGACCAGAGCAT
TTCCTTCCGGTGTCAGATGCAGTCCATCACTACGAGATGACGAAAATGGTTATTTCATTA
AACTATCAAGAACAAAGGCATGCTGTAATGGATGTTTCTTAACAAGCTTTTGTGAGGTGA
TCTCGAACGACTCAGCTGATTTGAAAATTTTCTTGGAAGAAGTTGCAGTCGGTGTTTCCC
CAGTTCCCAAGTATGTGAAAGATGATTAATGCACCCATGTAAATGCACATTAGTCAAAGG
TGGATAACAGGGTCTAGATTTTTCAAGCTAGTTTTGTAACGAAAATAGGTTTATCTTGCT
TTGGTGAGAAAAAAATGCAACTGATTGAACTCAATGTTTTTCTAAATAGAGAACCTGAAC
AAAAATTTCAAATCAAATCATTCATTCCATAAAAATGGTAACAAGGAAAATTTAAATTTA
AATAGGCATTACCTTAAGTAAAGTTTCTGCCAACCTTCAGTCGCTTGCATCTTTGACCAA
AGATCAACATACTGTACATCCATTTCTTTGGCTAGTTCTATACATTGACCTGCATAGACA
CCAGCCATTTCATTTGTCCTTTCAGGGAGCCTCCTCGCATCTTTTCCATAGAGTGATCTT
GGGGAGGAAATACAAATAATCAACAACTAATAGATTACACATTATGTGTTCAGTAAAGCT
TGTGGAAAGCGAAAAATATCAGTCACTGGATATAACATGAATGGCAAATGACAAACGAAT
TATACTATTCCGTAAATCCATTGTGCCCACAAAAACAAAAGGAACTCCAGTATTTAGTAG
ATCAAGAAAAGACAATAAAGAAGCTAATTTTGTGTTTGGCATTCTTCATTCTCATTTCTT
TCTTTCTGTGCCAGTCAATCACTAAAGTTATTAAAGCAAATACGAATAATTCAGGAATAG
AAGTGATGCCAACCGTGCATATCTTTCTCTTCCATCTTCGTCAATAGGAGGTGGGGTGAT
AAGCAAAATCACCATGGACTTGGAACAATCCTGTATTGATATAAAATGTCAGATTATAAA
TAACATGAATGACTGATACTTCATATTGGCTCAAAAAAACTACTAAAAAACATAGCACTG
CAATTGTAAATTCTAAAATTTACCTCAGTATGCCTACTTTAACTCGACATAACATATTCC
CGCAAAAAAAGATTACGACATAACATAGATCAATTTTTTAACAATGAAAGACATTTAACT
ATATGACACACCGGGAGACCCTGAAGTTGATGCTGCTGTAATATATCAACAACAGTGTTT
TTTATTCCAAGTTTCCAACAGTACTAATTATTAGGTAAAGAAACTTCGATAAACTAACGA
GTTAAAATGACTGGTCATTAACTCTGAAATGGAGGTTCCATAACTTTTGTATGACAGATA
GCAAGCATGATGTGAATACTGCTTCTTAATTTTCCTAGCCCTAGTGATCAAAATAGGCAC
TCCAGCAAGCTATGATCCTAAGAAAGCCAATCCACTTTTACACAGATATATACCTCCTGA
CAGGTAGAGTTACATACAGCTAGTCCGAAACTGCTTCAGGTCAGAATTCCGAAAGCAAAT
ATAAGCTTTCCCCTTTCGTACAGTTCAAACTAACTAGGTACATTATTATTTTTCGTTTCA
AACTTACCTTCAGGTGATTAACAATTGTTTTGAGATTCTGTTTATACTCCTCAACTGGAA
CATGTTGTCGCTCGCTTGTTCGTCCTAGAAGCGCTGCATCATTAGCGCCAAAGAATATAG
TCGTAGCAATGGGTGGTAAGCCAACCTGCATAGGGAGTATTCATTGATATAACACAGATC
ATTGTGGTAATCTCATAATTAACACCAGAGCAGCTGTATGCAAGCTGTTCCTACCAGGGG
AAAGATGCGCTGGATCAGGAACAGGGCCCATCTTGAGTTGTACCCACCATAGCCTCTGAC
AACAACATCGGCCTGATACAGAAAAATTCACTGGATATCGGCATCGATACACCGGAAAAC
GAAAGGGATTTGAGAATCGATGGGGTCCGGTTCGACCTTGCGGGAGTAGGTGTCGGCAAG
GGCCGCTCCCCAACCGCCGGGGCGGAAGGACTGCTCAGTGATGGAGTCGCCAAAGAGCAC
CAGACGTGGCCGCAGCATGTCTTGGGATCCCGCTCCCCCTGCCAAAGCCAGAAGTGGGAG
AGCAATGTGAGAGGGGTTGGAATTGGCTTGTGCACGGTGATGGTGGGAAAGGAATGCAGC
AAACCACCTGAAGCATCGGCAAGGCAAATGGGACGGTGGCCGGCAGACGGGGCTGAGGGG
CAGGATCCGGGCATCGCCATCGAGGCTGAGCACCTGGTTGCAGGCAGGAGTATCTAGGGC
CCCTATAATTTTGTCTTTCCCCCCTGATCTGCAAGAGGAAAAATGGCAGCTATAGTTAGA
GCAGAGCAGGTGCTGCAATCACCATACAGTTTCGAAGGAGTGAGCACACAGACACAAATT
CATTCGACACAAGAGCACCTAAATGGGAGCATACAGAGAACCGATGTGCCGGCTGACCAA
TTAAAGCAGATGTATATAGATATAAATACACAACAGAAGTTGCATCAGAGAAGAAGGGAT
TCCAAACATGCTTGCGATCCTACCTACGTAGTACGTACTCCCTTCGTTTCAAAATATAAG
ACCCTTTAGAAATTACACTAGGAGACAACATACGGAGCGAAATGAGTGAATCTATATTCT
AAAATATGTCTATGTACATTCGTATGTAGTTCATAGTGCAATATCTAAAAGGTCTTATAT
TTAGAAACGGAGGGAGTATATACTAGACGTTTGACGGAAGCAAAAGCTGAAAATCATTAT
GGAGTTGCAGGCAGCAGTCCACGATAATGAATCCTGGTTCTTAACAGCTAGAGCAGAGGA
ATCGAGCCGCCACTCGCCTCATCAACTCAGCCAATGCTCCACTGATACTATGAACAAGAT
CTGGGGCTCCTACTGTCTGGCACGGGTTGGCCTGAATGCATCTAAAGTTCACGCCAAGAT
TCATACACGCGGAGCAAACTAGATCAGCGGATTTGGGAGGGTGAGGGGGAAAGGGTCGGA
TCGGATCGAACCTGCTCCGATCAGGTCATAAGCGGTTGGCCTCGCGGTGCTGCGTGGCGG
AGCACTCCGGGGACCTAGCCGATTAGCTCAGGGGGGCGGAGAGGGAGCGCCGCCGCGTTC
GATTCGGCCGGCGGCGGGCTGTCTCGCTCCTGACCTCCACGGGATGTGCGCTGAGATTCG
GTCGCTAGCTCTGCTAACAAGGCCAACCAGCCTCTCATCTCTGCCCTGCAAAGCAGATCC
AACGGCCAACATTTTACACTAGTCAAAACAGTACCAGAACAGACTAGAAACTAACTACTT
CCTCCGTTCCTAAATATATGTCTTTTAAGAGATTTCACTAAATAACTATACATACGAAGC
AAAACTAGTTAATCTATACTTAAAATATGTCTATATACATCCGTATGTAACTTCCTGGTG
AAACCTTTAAAAAACTTATATTTAAAAACGGAGGGGTAGCAATTATCGTTGAAACATTAT
TGAAGCAAATATTAGCACACTTTTGAAAAGCACTCACGAAATTAGGATGGCGCATGACCG
TGTTTTTCTTAAACCACTTCAAGAATTTGTTTGTTAATTCTTTTTTTAAAAAAAGGTTAA
GACCCCCAACCTCTACATCAATCGATGCATACAACTATCTTTATTATTTATTCAATAAAG
GTCTCACAAAAATATACATCAAGCCACCCGAAGCCCCCACTCATACCTACAAAACGCGAT
AATGTGGAGTGCTATCACTTTCCATATCTTAAAAAGGTGTCATCGCCGATCCATCCACAT
AACGTATCGAAACTCACAGCCGGTGCAACATACCTAAAGCATACACCGTATGCACACGTT
TTAGAAGCCGCCATCATCATCGAACCGCTGACCCATCTTCAGGAGAGATATCTGCATTAT
CCTTGCCAGTCCAGCCATTCGTCGACGCCACCACAGCGCCCAACGGCGCCACCTCCCCGC
GCTCGTCTATCCAGACGCGAAGACTCTGTAAGAT