Contig Data
morexGenes
Links



Map Locations of contig_7505 (2653 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7505

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77291 3 2295 bp MLOC_77291.2 Available Available LOC_Os02g44000.1, FRAME:-1, EVALUE:5e-179, 13102.m04895 protein amino acid kinase, putative
MLOC_77290 1 483 bp AK369641 Available Available None





CDS Structure of MLOC_77291






CDS Structure of MLOC_77290






Contig Sequence (2653 bp)

>contig_7505 2653 assembly3_WGSMorex_rbca.fasta
ATGAATAACGAGGCAGTGCAAGAATTCAGGAGATCTTTCCAGGATGGTATGTTTACACTG
AAATGTTTATGATGAGCAGCTCTGTTTGGCATAAAACAGTATCACATATATCTGTTTCTT
TCCTAGAAGAGAGTGCCATTTTTTTTTCCTAGAAGAGTAGTCAGGCAGATGCCATCTAAT
GACTATTTTGGTCAGATTTGTGTGCTCTTGCAAAAATTATTAAGTATCACAGTTGTATTA
TCATTTACGTCCGGGTATACATGCATGCCTTGTCTTACCGCATTCTACCACATCTTTCAG
GCAAAGAAGTTAATAGAAAGGGAAACCCTTGTGGTCCTGCTGCAGTGCTTAAGTGGATCC
TTGCCAACACCCAGGCAAAAATAACGGAATTCTTCGATAATATATCGAAGATTGTCAGCA
TGCTCTTCCACCCTCAAAGCGAAGAAGATAAACCCGACCTGTACAACGATGCAGTGAAGG
TGTCTTTCATGCTCTCGGTGTTTGTCTTCATCGTGGTGGCCGTTGCTCGTACCAAGTGAG
CACAACAACCCGTCGACTTTAAATTTCAGTGTTTTCATGGCCTCTTTAGTTATGGTGCAG
GGGCACATCATCTAGTGAGCGTAGTTTAGTCAAGATTGATCACGCAGACTTGGTTTGAAA
GGCCCAGAATTTACATTGCCGGTGTGTGCGTGGTAACCATGGTTGATTGTAGTTAAATAT
TTAAGCTTGCATGCAGTGTGCTTATCTTGTTTGTTTCCTGGTGCTTTTGGATACAGTTAT
GAGCCGTGGGATTTCGAAGTGCGGTGAATGCAAGATTTGTAGGACATCACAGGCCTCATG
ATTTACACGCACACGAAACTTGTACATTGATTATTACCGGGCTGTAAACATTTGGTCATG
AAACTGTTGTAAGGTATTGTTTGTTTTGTGTGTGTTTTTTATTTATGTAACTGAAAGTCA
TTGGGTATTCTTCGTCGTGTAATGCTGCTTTCAGCACATATGTAGAGCTTGAGCGGCCTA
GCGAGCATGCCGGACGTCAAACCCGGCACTAGAACAGCAGTACTAACCAATTCACATAGC
TGTAGTTGTAGAAGATACTAATAGTCCAGTGGCAGATCTTGTATTATTGCCGCCAAACTG
TATATATCCTGCATGAAGTTGCAATCTGTCACATATGTTCCTCATCCAGAATTCGAATCG
AAAACTCAAAGTTACAACACGTGAAGCAACCCTTCACACAAAACCATCCAAACCAATGAA
CAAAAATACAGTAGAAAAAAGAGAAAACAATGCCGCGAAAATGTTCAGCCAGTGATCATA
GTGCCGGTTCCTTCGTCGGTGAGGATTTCCAGCAGGAGGGAGTGCGGGACGCGGCCGTCA
ATGATGCTGGCCGTGTGCACGCCCTGCGCCAGCGCCCGCACGCAGCACTCCACCTTGGGT
ATCATCCCCCCACCAACCTTCCCCTCGGCCACCATCCGCCGCACGCCGGCGATGTCAATC
TCCTTCACCAGGCTCCCGGGGTCGTCCCGGTCCGCGAGTATGCCGGACACGTCGGTGATC
AGCAGCAGCTTCTCGGCGCCAATGGCGGCCGCGATCTCCCCCGCCGCGGTGTCGGCGTTG
ATGTTGTAGGCCTGCCCGGTCTCGTCGGCGGCCACGGTGGCGATGACCGGGATGTGGCCG
GAGGCGATGATCGGGTGGAGCACGGAGGGGTCGACGCGCGTCACCTCGCCGACGAACCCG
AGGGCCGCGGCGTCGGGGGAGGGGCGCGCGGTGAGGAGGCGCGCGTCCTTGCCGCAGAGA
CCGACGGCGGTGGCGCCGGCGAGGCTGATGAGGGAGACGAGCTGCTTGTTGACCTTGCCA
ACCAGCACCATCTCCACGACCTCCATGGTGAGCGCGTCGGTCACGCGGAGGCCGTTGCGG
AACTGCGGCTCGACGCCGACGCGCTGCAGCCAGGAGTTAATCTCCGGGCCGCCGCCGTGC
ACGAGCACGGGGCGCAGGCCGACGCAGGAGAGGAGGACCAGGTCGCGGATCACCGACGCC
TGCAGCTCCGGCGACTTCATGGCCGCGCCGCCGTACTTCACCACCACCGTCTTGCCCTTG
AACCGCTGGATGAAGGGGAGCGCCTCCGACAGAACGTCCACGCGGTTCAGCGCCGCGGAC
GTTGGATGGGAAGCGGACGCCGGCCCCGCCGGCGCCAGGGAGGAGGCCGAGACGCGGAGC
CCGCGGCGTCCATGGGGCGCGGGCGAAGCGAGGGTGCTGGCGCGGGCAGCGTTGAGGTTA
GGATTCGGGAGGAATGCGGAGGGGAGGATGCGGGCGGGGTGGGGCTTGGTTAGGAGCATT
GCTGCGGTCGGTGGCCGGCCAACGGGGAGCCTCGGTGTTTGCGCCGCCGGGGTGTTCGAC
GACTTGCTTGCCTGAACGGAAGGGAAGGGGTTGGTGCTCGGCGCTGGGCGTGCGGGTGCG
GCACAGCGGAAGAGACGGTACTTGTAGATGGAGCGTCGGGCGGAGTAGGTGGTGACTGCG
GAGCGGGTGTGCTTCTGCGAACCGGCTGCCGTTGACACGAGCACGTGGCTGTTTCTTCGG
TCAAAGACTTTAAGAAAAGCGGGTGATCTGCGCCGGCGGGCCGGCCCCAATTTTCGCGCC
GGCGCCCCGGGCC