Contig Data
morexGenes
Links



Map Locations of contig_7495 (3414 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7495

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77258 4 1734 bp MLOC_77258.2 Available Available LOC_Os12g40570.2, FRAME:+2, EVALUE:2e-132, 13112.m04222 protein WRKY transcription factor, putative, expressed





CDS Structure of MLOC_77258






Contig Sequence (3414 bp)

>contig_7495 3414 assembly3_WGSMorex_rbca.fasta
ACCGCGCGCCGCCCGTAGGTGAGTCGCGGCGTCCCTGCTGCTGCTCCGCGGCCGCCTCGC
CTCGTGCCGCGCGGCTCGCTTGCGCGGGCGGGCGGTTCTTTCTTGCGGGAATCTTGGGAG
GGGGGGTGCGGTGGTGGTGGTGGGGTTGTTGTTGTTGCCCCCCGTTTGATGCGCCCGCAC
GCAACAAATCGCTCGCTTCTCGCCGCCGCGGGCTCGTCCTCCACGCCCGTCTTCCTCTCT
CTCTCTCTCGGTGCCCGCTGCTGCCGCCTCTCGGGGTTCCGCCTGAGTCCTAGGCCTCCG
CCGTGATCCGGCCCGGGACCGCTTTCTTGGCCGGCCATCGGCCTGTTGCTATCGTGACGG
CCGATGCGTGGCCGCGCGAGTGACGCGGAGTGGCCATGGTGAGCTTTTCTTGAGATCTGA
GCGAGTTTTCTCTCCCATTTCCTGCTCTTCAGATCTGCCGCGGCGGGAGCTGCCGAGTAA
CCGACGTGCCGGTGAGCTTCTCGAAATGGAGGAAGTGGAGGAGGCCAACAGGATGGCCGT
GGAGAGCTGCCACAGAGTGCTCGGCTTGCTCACCCAGACCCAGGGCCCGGAGCAGCTCCG
GAGCATAGCTCTCGGGACGGACGAAGCCTGTGCCAAGTTCAGGAAGGTGGTCTCCCTCCT
CGGCAACGAGCCCTCCGGAGGAACCACCCATCCTAGAGCCAAGGTTGTCAGCAGGAGGCA
GACCCCCGGGTTCCTCAGCCAGAAGGGCTTCTTGGACAACAACACCCCGGTGGTGGTGTT
GAACAGCGCACACCCTTCCACCAGCTCCGCGCAGGTGTATCCTAGAAACAGCATTTTGGA
TTCGCAGCCCGCGCACCCAATCGGAGGGCCTCCCAAGCTGGTCCAGCCATTGTCCGCGCA
TTTCCAGTTTGGCGATTCGTCGCGGTATAATCAGTTCCAGCACCAGCACCAGCAGCAGCA
GCAGAAGATGCGGGCCGAGATGTTCAAGAGAAGCAACAGCGGGATCAACTTGAAGTTTGA
CAGCCCCAGTGGCACGGGCACAATGTCGTCGGCGAGGTCCTTCATGTCGTCTTTGAGCAT
GGATGGCAGCGTGGCCAGCCTGGATGCCAAGTCTTCCTCGTTTCATTTGATCGGCGGGCC
TGCTATGAGCGACCCGGTGAACGCGCAGCAGGCTCCAAGGAGGCGGTGCTCTGGGCGTGG
GGAGGATGGAAATGGCAAGTGTGCTGCAACTGGCAGGTGCCATTGTTCAAAGAGAAGGTA
GTAAATCTGACATATTTGGTGTTTCTGACTCTTTTTGTTCAAGATAGGACACCATGATTA
ATTATCTCTATCCTATTTCAGCAGGAAGTTGCGGGTGAAGAGGACGATTAAAGTTCCCGC
AATTAGTAACAAAATTGCTGATATACCTCCAGATGAATACTCATGGAGGAAGTATGGGCA
GAAGCCAATTAAGGGTTCCCCTCACCCCAGGTATACTTTTTATAGTGGATTTTTTTATAG
TTGTGTAAATAAAAAAAAGTGCAGAACTGCTCATCTGATACTTTGTAGGGTAAATTTTAT
TTTGCTACGATTTTCTTTACTATATTATACATTTATAGAAAGTAGTCGTGATGATGCTAT
AATCACCATAATGCATCAACTTTGTTGGTAAAGGTGTGATGACTTACATGCTACTATTAT
AGAATGCACAACTGCATACAAACCATGAGCTTACTCAAGTGCCTTGTGATAACTAATGTG
TCAATGATAATCAGAACACACTTTATCCAAGGAATGTGTTTTCTTGGGTGCTGTACATGT
TTGTTTTCTATCCAATACGTGATTCGGTATCCATGAGGTGTCGATGCCTTAATTGCTACA
ACATTAAATAATCACTTCGTGGATGATGACATTCTTTCTTTTCTATGCCACTTTCGGAAA
AAATATGTCAATCATGAGCCTTAAAGCAACCACTTCCCAACCGAGATCATGCTATCGTGA
TTCACTTAGTCTCTCTCACTATATAATAATCCTATCCAAATGACTTGCCCTCCATGTCTC
TCGCTTAAATGGCCTGATAATAGAATACACAAATATAGCTATACAGCAATGGCAATCACA
TAAATATGGTTCTCTGAATTGGCACATCTTTTTTTCTCTTTTTAACAAACACTGGATATA
GAAACATGTCTCTTTGTACTTCTATTTTTGTTTCAAACCCAACATGTTGCTAATTTTGAT
TTGTCCCTGGAGAAGACTAACCAATGGCTGAACATAAAATGCAGGGGGTACTACAAATGC
AGCAGTGTGAGGGGCTGCCCTGCGCGGAAGCATGTTGAACGTTGCGTAGATGATCCGTCG
ATGCTCATTGTGACATACGAGGGTGAACATAACCATACGCGAATGCCAACCCAGTCTGCG
CAAGCTTAGAGGATCCCTTAATCATTACCATTTTCAGGAAATGCCAACCCGACGTCACTT
GTTGGAGAGACTGTGTTGTTCCCCTAAATTAGGATTGCGAAGTGACAAATATGGGATCCA
TTTGATTTGAGCAGTTGGTGTGTTGGTTGGCCTCCTGACCTACATGCTTTATAGTGAGTG
TCAAGTGGGAGGATGCAAAGATGTTATCCTCCCTTAAGGAGGTAATCAGAATGATAATGT
TAGAACAAGATGTTAGATAGGATACCTGAGATTTGCTCAGGAGGGATGATGAAGAGTTGG
AAGGGAAGATAGAAATTGGGGATGATATGTGTGTAAAGTAGCGAAAATGATAAAATCATT
GGGTCTCCCTCCTTCTGTACCAAGTGCACAAAAAGGCTGGTCTAAAATAAAATAAATGGG
AGAGAACCAATTTGTGGTTCGATTAATTCTCTAACTCATCAGGGACAAAGTCATGTTAAA
TATCTTGTATTGTAAATATCTTGTGTTGTGTGTGTCTCACTAAAGCAGATTATCCTTTTA
GTCAGAAGTGAGTTGTCAACTCGTTTGATTAAAGATTTTTTATATCGTCACAGCTTGTTA
GTACTCCCTCCGTTCCTAAAATACAAGTCTTTCTATATATTTCACTAAAGATTACATATA
TGAAATAAAATGAATGAACCCATGCTCTAAAATATATCTATATAAGTTTGTATGTAGACT
GCTAGTAGAATCTCTGAAAAGACTTATATTTAGAAATAGAGAGAGTAGTTGCTAACCAAT
TTGTGTTTTAAATGAACATTGAGATTTAGGTCATAAGGAAGTATATTTTAGGGAACCGTA
CAAAATAAATGAGCGACCAGTATTCTTTCAATGGTAATAAAAATGTAGGAGTATACGTTT
TCCATAGGGACCGTATATTTAACCTGATAAAAATGTTTCCATCAGTCACTTTCTTTCATG
ACTATCAGATCAACATCCAATGGCCTCAATCATGCCTCCCTCCTAGCTTATCCC