| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_7491
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_77252 |
6 |
1646 bp |
MLOC_77252.2 |
Available |
Available |
LOC_Os03g56820.1, FRAME:+3, EVALUE:7e-153, 13103.m06210 protein fatty acid hydroxylase, putative, expressed |
| MLOC_77253 |
3 |
1016 bp |
MLOC_77253.1 |
Available |
Available |
LOC_Os03g56830.2, FRAME:-3, EVALUE:3e-157, 13103.m06213 protein ad-003, putative, expressed |
CDS Structure of MLOC_77252
CDS Structure of MLOC_77253
Contig Sequence (5789 bp)
>contig_7491 5789 assembly3_WGSMorex_rbca.fasta
CCCCCCTCCCCCCGCTCGGCCCGGGGGGGGGGGGCGGCGACCGGGCGACCGCCCCCCCCT
CCTCTCTCCCCGGCCGCCCGCCATTGCCGCTTCTTCCCGAGGTACCCTCGCCCCGCCATC
TATCTCTTCGCCGCGGTCTCGCGGTGGCTTCTTTCCGCCCTTTTGTTTTCGGCTCCGGCG
GCGCTTGGTTCCGCGCGAGGATGCCAATCACTAGGGATTGTAGATTGTTCGTGCCGGAGA
TTCCGGGGCAGCGTGCTTCCCGACGCGGCGAAGGTCGCCGGAATCGGATCTAGGAGGAGG
AGGAGGACGACGACGACGATGATGATGATGATGGGTTTTTTTTGTGCCTGCATTTTTTTC
CTTCTTCTGTATTTGGCGGTGCGATTCAGGCCGGAGTCGTGTGGACGAATCCGTGTGACC
AATCGCCGTGTGATTGATAGACATGAGTAGGGATGGTTACGAAGCCTGCCAGCCATCAGA
CGTGTGGCGGAGTCACGTGTGATCATGTGCGTGGCGTGATTGCTCGGCCCAGCACACGTT
ATCGTGGGGGGGATAAGGGTGAAAAATGCCGTGGTTACGGCGTCCTCTTGAGCCTTCAGA
CTTTGGGATCCCATGTTCGCTTCTAGCTAGTTCCTGTCGCGCATGTGATGAATCACGTGT
AACTATATACTCCCTCTGCACCAAGATAATTGTAGTTGGGGAAACTAGTCTAGCTCTCCT
CCACTACAAGTATTTCGGTACAGAGGGAGTACATGGTGCAGCTCTGATTGGTTGGGGAAG
AGTATAAGATGGTTGCCCAGGAGTTCGCCGTCCATTTCTTCACTCTTCACTAATTAATGG
TTTACGTGTTGCCTTCCTCTGCCCATTGCCATCCACAGAACTGAGGTCGATCGGCGATCA
CGCCTTCCTTACTTTAGCCGTTTAGCGCAAGGCTTGTTGTGTCTGTGCTGTATGCCTTTT
AGTTTTTGGGATCCCCCTCTCACCTTCTTGACTGTTATTGTTGCGTGCGTGCATCATGGA
TGATGTTTACTGTAATTTTAATTTTTACAGTGCGGCTCTGATTGATTGGGGAAGGGTAGA
AGATGGTTGTCCAGGAGTTCGCCGTCGATCTCGACAAGCCTCTTGTTTTCCAGGTATCAT
CTGCTCTGTCAGTGCTTCTCTTCAGAATAACTGTTGCAGCAACTCTTCTCGCAATTTTTA
GGCTCGACGTGTGCACATTTCCCATTCCTTTTCTACTTTAAATTTGCCCTCACTTTGGAT
CTTGTAGCAGACACTTATGAGTTCTGAGGTACTGATCACCAGCTCGATTTCTGAAATGTT
GAATTGTGAATAATTTAAGTGATGCTTGGTGGGCATGCATGCTCTGCCCTTCTGAAATAA
TATGCTACAGTGGTGAAGTTGTGGTCTTTAAAGTTTTAACTTATGGAGAATTGGTTCTGC
CTGACAGTTGAAGCCAACTAATTTTGACCGTGTTCTTTATTTTGTCGATGAAGGTTGGCC
ATCTCGAGGAACACTACCAGGAATGGGTTCACCAACCCATCGTCAGCAAAGAAGGTCCAC
GCTTTTTCGCAAATGATACCATGGAGGTAACGCTAATGCGCTCCGGTGTACTAACGTCAT
TGGGGATTTTGGAAACTGAACTGTCATACGTAATGAAAATTTCTTCGTGCAGTTCTTGAC
ACGCACAAAGTGGTGGGCTGTGCCAGTCATATGGCTACCCGTCGTCTGCTGGCTGTTTGC
CAAGTCTATTCTGATGGGTCACACCATTCAGGAATTAATCCTTATGGCCCTGTTTGGAGT
GTTTGTCTGGACGTTGATTGAGTACAGTTTGCACCGCTTCCTCTTCCACATCGAGACGAA
GAGCTATTGGTAACAACTTATCAACCTTGATGTTGGCAAATTTTCACCGGGATTCTCCTT
ATGCTCATAACTGATGGTTGACGCGGCATTGCAGGTCGAACACAGCACATTACTTAATCC
ATGGATGCCACCATAAGCATCCTATGGACTCGCTCAGGCTCGTATTCCCTCCTGCTGGGG
CAGCGATCTTATGTGTGCCGGTAAATTAATATCCCTGGACCCATGAAATGGAAATGCTGG
ACATTTGCAAACTGCTTCCATGAAACATAACCAATTTAATCAAAGTGGTTTTGTTTTTGT
TTCTTATTTTTCAGTTCTGGAATGTTGTGGCATTCTTTGCCAGTCCATCTACCACCCCTG
CGCTATTCGCTGGTGGCCTGCTGGGGTATGTGATGTATGATTGCACGCACTACTACTTGC
ACCATGGACAGCCATCCATAGATCCAGCAAAGCATCTCAAGGTGATTAGCACGATTCCAC
TTGAAGTACCCCTAAGCTATCCCATGCAGCTCACTCCTCACAAATTTAACTCATGATGCA
GCGGTATCACCTCAGCCACCATTTCAGAATCCAGGACAAGGGCTTCGGCATCACCTCTTC
GCTCTGGGACGCCGTTTTTGGGACGTTACCTTCGTCCAAGATTGCTGTGAAGCTCAGTTG
ACACGCGTAAACGTGTTCTTTGCATGAGAAAGTTTTAGAGAGGATTTGTAGGTCAAGGTT
AGGTGCGAAGCTCCTCTCGCCTTTCTGCTGTGGGTTGGAGTTCCTGTGGCGTGTGCCGAT
GCCTGTTCCGGTGTGAAGATGTTCGATTGGCCTTAAAATTCCATCCCCAGCCAATGGGCT
ATTATTCTTGGTAGTCGATGCTATAGGATTCATCTTCGTGTTAGCTAGGATAAATAGCTA
CATTCTGCAACAACGCTTGTCATTTTTCTCTCTTTGGTTTTAGTTCTCGGTTGTTCAGAG
TATGATGCAAAGATGCTCTTTTCTGGTTCCCTATCATAGTTGTCTGGCATCAGCATCAAA
GGACATCTGAAGGATATTCCGGCTAGTGTTGCACTGTCGGAAGACTGCACAAACTTGTAC
ATACACTTATATACTAAAATAAATAACTTGTACTCCCTCCGTACCAAAATAAGCATCTTA
ACTTTAATATAACTTTATATTAAAGTTAGTACAAAGTTGTGACACTTATTTTGAAACAGA
GGAAGTACATATCATGAAGGATAAAACTGCAGGTGGTAATTTTTCCCGCACGTAAAAAAA
TGTTACACAATCAGACTGTCAAATATGAAGCCATTCTTGCAGCTGCAGATCAGGTTGATC
CAGTACGTAGTACCTTGCAGAGATACAACTAGGTACTCAGCCATCTCATTCCTAATAATT
CTATGGATCATAGAACATATCTGCAGGCGGTTGGGGCATCAGAAGCACATGGGCCTCGTT
GGTTTCAGATGCCCTGCCTTTCAGAATCAAAAGATCTAGATTCCATAGGCGTTAAGTTTT
GACACCAATGCATTCAATCTCAGGAAAGAAAAAAAACAGCCTGTTCAAAACAAAATGTAC
ACCGAGCAAAAGTGCGACTGAAATTTTCTGTGATAGGAACTCAAGACAAGTCAACAACAA
TACATCGCCAGACAAACATGCTGGCACACCAGTGTGCTTAATCTGGGTGGTTTCAAGAGC
GGATTACACGGGGCATATTTTTAGACCGCCCTCTCTTGCCATTCTTTGTGACCTTTGGTT
GGCTGGTCACCAATGCGTACATTCTGACAGCAAATAATTCCTCAGGCAGCTCCTTTTGGT
TCTGTTATCAAATTGCGAGATTATGTGGCTGACATATGAAGCTAAAGTTTGTCATTTGGG
AAATTTTGTTAGTTTGCGAGATGCATACCTTGATGTTGTGGATATACAATCCACACTTGT
TAAATAGCTCCCTGAAATATGCATCGGATCTAGTGACGCTGTTATCCTCCTTGTCTAAAA
CAAATCCTGACAACACAAGCATGATAAATTTCGAAAATAAGTATAACTTGGTGCATTTCT
ATCATAAAGTAAAACGGCTGCAGTAACGATATAAATCATTTGATATAGTAAGCTCACCAT
TTTTTGCAATGTTCTCTTTCAGAACAAAAAAACCATCTGGTTTGAGCCCAACCTGGAAAC
AACATTACCCGTTTATGTTTAATTAACATGCATATGTAGTTGAACAGGCATATACATAAT
CTTAAATCAGATTTTGACTACTAATAGGCGCACAGTCATGGTCAAAGAGACCCAGAACTG
GAATTAAGTCATAAGTAAAAACACAGGCCGCAGTTGGCTTAGAAAATGTCGCTCGTTCCA
ACTTGCACTGTACATGTAATTGTTGAAACTATATAGTGAGCATCTTCCCATATATGCATA
AGAAAAATATAGTAAGTGTTTTTTAAGAAGCGAAAAATATCAACATCCTTTCTCCAACAA
TAGTACACACTAGCATGCTTCTGCGTACGATGTACATGTTAAATTTACACTTAAAAGTAC
AAAAAAAAACTTCAAGGCAAGAAATCAGCATAATTTTAAAAACAAAATATAAGTGAGTTT
AAACCAAATCACCTTTGCACGGGTAAAAAATGAAATAAAATCATCATCAGTAAGTTGCCC
TATGCACCACTGGATCCATATCACATCATATCTTCCTTCCTCAGGAGTGAAGTCCTGAAG
CAAGAGCAAAATTTACCATCTGGACAGAAGCAGCAAGAAATTTGCAAAAAGCATAATCGC
AATAAGAATGCTCAACCAACCTGAAGAGGTATACAATAGAAGTTCACAGCCTTGTGCGTA
TCATGTTCTACATCCATACAATTACTAAGATTTTCCCGTGCCGCTTCTAGAAAATGAGCT
ACTGGCTCAACGAGATCAACCTGAAAATCCAACTCCAGTTTAAAATGGATCATTGAAATT
TTGAAAATACAAACAAGACATATTACAGAAGAAACAGAGAATCACAATTCAAGTTGTGAT
ACATCAGGGAGAAAATGAAAAATAGTACCCCTCCGCTCACAAAAATATAAGATGTTCTAA
TTTATTTTCTGAAACGGATGTATATAGACACATTTTAGTCCGTATGTAGTCCATATTGAA
ATATCCAAAACATCTTATATTTGCGAACGAAGGGAGTAGGTTCTTGCTAACATCACCGCG
CGCGTACAACAGAAGCTGCATGGAGTGAGGATAACTCTTCATCGGTCTAGAACTGGTATC
ATGTATGGATAGGCAGGTCTCTTCAGGCTCAACGGATCATGGTATAAACTCAAAACTGAC
CATGAGTCTCACTGCATACCTCGTTGAAATGCCTGATAAGAAAATTCTTCGTAACGCGCC
CGATGCCCGAGCCACAATCTGCCATAATATCAGAGATGACAGCATAAGTGCTCAGCTAGA
TCACAGGGTGCAAATGTGGATTCCATAGCTTCAACAAGCTATGCAGTCACACGGATAGAG
TAACTAGTGAAATGCTCTCGGTGCAGAGCCCAGCTCACCAAGCGCGACGAGATGGCGCTT
CGCGGCGCCGAACCGCTCGGCGAGGAGAGGGCGGAGGAAGGCGTCGCTGCCCTTGACGTC
GGCGTCGTTGACGCACCCGTACCCTCCCAGGACGCCCTCGGTCGACGCCTCCACGCCCTA
GGGCACACAAACCGGAGCAACTGGTAAGCTAAATCTGCAATCGGATTGGGGGTTTAGGGT
TTAGGGAGCGGAGCGGGCCGGCTGAGCGGGCGCTCATTAGCCATTTACCTGCCAGTAGGC
GATTGCTTTGGAGTACCACTCCTCGCGCTTGCCTTCTCCGCCCGCCTCCTCGCCGGCGTC
CCCATTGCTTGCAGGGGCGGCGGCGCTAGGGGCGACTTCGGAGACCGAGGCGGAGGTGGT
GGCGCCGATCTCTTGCGCCCACATCTCCG
