Contig Data
morexGenes
Links



Map Locations of contig_7478 (6850 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7478

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77208 1 137 bp AK250385.1 Available Available None
MLOC_77209 2 1594 bp AK361589 Available Available None





CDS Structure of MLOC_77208






CDS Structure of MLOC_77209






Contig Sequence (6850 bp)

>contig_7478 6850 assembly3_WGSMorex_rbca.fasta
GTCTTCTCCACCGGCTTCTTCTCGGCTGCCTTGGGGGCCATGGATGATGATGCTCCGGCT
GCTGCTGCTGCGAGGGGGAGATGGGCTCTGGTGTGTGTGTGGCTTCGCTGGATGGTGGGA
GGATTGGTGGTGGATTGACGGCGGGGAAGGAGGCGGGTTTATAGGAGATGGAAGGCGGCT
CTGATTGGTGGACGGGTGGGTGACGCGGATCGATATGATATCTGCCGTCCGTTGTGGTGC
GCGATGGACGACCCAGATGAGCCTTCGGCGCGGATCGATGACGTGGCCGAAAGAAGGTGG
GCGGGGAGCACACGGGTTTCGGCCCACGCGCGCGTACTGGAGTTTCAACGTGGCGGGAAT
TTGAGTTCAGTAGTTTTCGATCTTGCCTACAAAGAAAAGTTGTTTAGGATTTTTTGATCG
ACATCTTTTTTGCTGCCAAGCACTTTTTTTTCTCAAAAAAGTAGTAACAGACTATCATTG
CATAGGTCAACTTCAGTAATAACTCGGTTGCAATATACTCTCTCCGTCCCAAAATAAGTG
TCTCAAGCTTAGTACAACTTTACATTAAAGTTAGTATAAAGTTGAAACACTTATTTTGAG
ACGGATGGAGTATGGATTAAGGGAACTCGCAAATTTCCTTCCGCATCCTCTGCGGACATG
GCAGTCCGCAGACACGAAAGCGAAAGGACAACATCCAACGGTATTACGTTAGCCGCATAT
ATTTTATCAACAACTCAAATCAATCGGATGAAATTCGTTTGCAAGACATGTTTCACTCAA
GTTTGGATATAACTTACATAGAATGGACGATGTTTCGATCGTTTAACTAAAAGACTAGAA
GAATAAAAAACCTAAACCTTATACCGGACGACCACCTTGACGCGTGGCCACCCTACCCTA
TCGCACCGTTGTTTTTGTTGGTATCGTCGGTGCAGTCATCGTCGTTGTGATCCCCTCAGC
GGCGGAACGGGCCGGAGGGCTGCAGCAACCCTGTCCGGGGCCAATTTGAACATTTTAAAA
TATGTACTAACCATTTTTTTAAACATCGTTGAGCATATGTTAGATGTGCGCAAATATTGT
TTTAATAATCTGTGAACATTATTCAAAACAACGTTGAAAAAATTTAAATGCATGATCAAC
ATTTTTTTTTCAAACTAGCCATGAATAGTTTGTGTATTTTTTTTCAGTTTCACAGACATT
TTCAGTTTCATGACTATTTTAAAATTTATGACCGGCATCCGAAAGAGTCAATTTCTCCCC
ATGTGTGACTAAAAATGCATGATGAGCATAAAAGATATATGATGGGGTCTACGGATTAGT
TGTAGCCTGTAAGTAAGTTACTAGCTCCAAAGAAGTGCGGCGCACGCTGTGCCCGTGATC
GTTTCTGTCTGTATTTTATTAAAATAAGCAAAAAAACAACATATATTAATGAAGAGGAGA
ATGTGAATTTTATCTTTTCCCCATGATATATGTAGGCACGTAACCAACATTAAATGATTT
AATAAATTAAGCAAACCGGCTGGTCTATTGATGTTTTTTTGGTATGTTGTTCCGATTTAT
TCTAGTGTATTGTTCTGGGTTACAATTTGGTTACTATTTTAATGTATGGTTCGGGTGGGT
TAAAGTTTTTAGTTTATTCGGGTGTTGTTCGATTTTTCTATTCTGGGGTAGCCGTGGTTG
CTATTTTGGTTTATTTTGTTTATAGTTTCGGATAGCATTTCTAGGTTTATTAAGATATTA
TTTTGGTTGTTTTGGTAGTGAACTATTCGCTGATGTCGTCATGTAAAAATGGACAGTAAT
CGATGAAGACTTTTTTTCCAATAAATTACTGTTCATGCGAATATACTGTTCCAGCCTACT
GTTTTGTGCCCTAGCAACAGCATCATCGAAAAGGATCGAGAGACAATTGAGATGGTTTTG
TGTCGGTACATCGATGAAGAGAAATAATGTATAAAAAAATCCTAAATCTTAACCCTTCTC
TTTATAAGAACGTGATGGTGGATGAGGAAGAAAGAAATGTTGTGTAAGAAAGTTTTTTGA
CGTGCCTATTTTTTCTTCTTTGAAAGCTTTTTTCTTCTTTGATGTGCGTATTTTTTTTTT
CCTTTACTCCTTTCAGAATGCACTGTTCAAATAGGCATTGTTCGTCGATGGCACATCCGA
CCACTCTTCGATGTATGTATTGTTTAATATTACTATTCATAGCTACACATGTAATTTAAA
CAGTAGAAGGTAAGAAAAAAAACTAAAACAACTACTATTAATAGCTGCCCACGTAATTGA
ACAGTAGAAGGCAAAAAAAAGTCAAAAAAACTAGGAAACTGGAAAGTTTGCTGATTTAGT
ATATACTCCCTTCGTCCCAAAATAAGTGACTCAAAAATGACTCAACTTTGTACTAAAGTT
AGTGCAAAGTTGAGTCATTTTTAAGTCATTTATTTTGAGACGGAGGGAGTATATAATTTA
AACAGTAGAAGGTAAAGGATAAAAAATCTAAAATTACTATTATTCACAGCTGCCCACGTA
ATTGAACAGTATAAGGCAAAAAAAAGTCGAAAAAACCAGGAAAGTGAAAAGCTTGCCGAT
TTAGTATGTTTGAGATCAGATCAGGTCTCTTGGCCACCTTTGATCTGAATCGAAATCTAC
AGACTTTTCTAGGGAGCAAAACTCCAGCAAAAGAATGGCAGATTGTGAAATTGCTTCATA
TACATGTGAGCCATCAAGAGTCAAAATGGTGACTTGGCCGCTCTTTGGGAGCATACGCTA
TATTTATATCATATATCTACATGTTTGCAGTATTGATTCTCAGGCTTGAGTATGGATCGA
CTAATCCAAGAGAAGAGAAAAAGAGAATCTAGTATCCCTTTTGAATCTTGAGTGTTAAAA
CAGGAGTTCCCAGATCTAATTTACACCTGCTCAACAAATTGCATTCCGACATGACACATA
GACTCTCGCACCAAGACACCAAGAATATGTGCATCCAACACATTGCCTTCAGAAACAACA
CACAAGCGCATATGATTCACATCCAACCTGTCAACTAAAACAGGAGCGTGACAATCCAGT
GGTTGGGCGAGCAGAGCAGAGCCGACGACGGAAAAAGGGTGTGAAATTCGCATGAAATGA
GATTGAAAGCCAATGAGAACAAGCTACAGCTGAACTCACCAAAATGTTCGTCTGCAACCA
GAGCAAACCAACCTCAAACCCTTTATACTCAAGTAAAGGAAGTCGTCCAAGCAAGTGGAT
TTCAACTTGCCGGAATGCTCGTCAGCCATTACCTCATCTCATCCCTTTACACTTGCGACG
AAACAAAATCGCAGCAGTTCCATCGGACTAATTTGTACGATTTGCATACACATGTACTCC
CAATGTTATTAGGTTACAGGAGGAGGGATAGGAAAAATACACATTGTACAAGGCACGCAA
TTCCTGCCTGATTTACGAGCCCGCCTTACAGAACAGCACAAGAAAGTTTATGTACCTCTT
CTCTACATATCCTCTCCTCGGCTGGAACAGGCTTGCCTGATCCATTAACCTCGCGATCCT
ACTGTAATGTACTGCGCTGAATGTACCCAACTATTTTCATCTTACAGCTTTCCAATAAAC
ACCTGTAGTAAGACCTTGTCTACCCCCATCTGAAGATCTGGCCTCCCATGCAGGTGACCA
TCAAAATTGTAATCGAGACCATCTACGGCGGCTCACCGGTCAACTGAATTAACCTGTGAT
TGTAAATAATTACGGATTACACGGGTAAGATGGGGATAGAGAGAAAATCTGTCTACTGCA
CCCAGCTTCCCTTTTATCTTTGTTTTAAAAACAAAAAGCACGGACAGCATGCTAACCAGT
GCTTCTTACCAGTGTTGACAAAAATCAAGTCCAATTAGGCCGTCACGTTACTGCACAATG
CGCTTCCTCTTTGACCTCTTGCCCTTCTTTCCAGAATAAGTAGGGAGCTTCTTGTCGTTG
CCGGTAGTGAATGTTTCCTCTACGGGTCCTCCCTGTTGTCAGGTGTATATAACTGAAGAT
GAATTTCATATTCACACGAACTTTCTGCAGCGAGCTCTCAGAATGGCTAGCACCGCTTGT
CCAGACAGAATCATCCAGCAATACATGTGAATGAAAAGAAAATGAGTACCTCCTCTGCAG
TATCATCGTCCGAGTCTTCATCCTCTGATGTAGTTGAACCATTTGAATCTCCTGCACCAA
GTGCTTTCACAGCTTTTCTCCTGTTCTCCTCTTCTTTTAGCTGCTTAAACCTGCTCAGAA
TATTGTTGATTCTTTTTTACAGACCAAGCATAGTATAGTTAAATCAAATGTCATCTGAAG
TTCAAAAGCACCTTTCTCCACCCTGGCCTGATTGAGAACCTGAACGTTTTGCTCGTCCTG
CAGTTATAATTCCACTTGCTCCCTCATTCACAGCAGGCTTTGCTCCTCCCAGTTTCCGCA
ACCATATCTGCTGGGCTGTACTGAGGACATTGTTTGTAAACCTGCATGGAGTGTCGACAC
ACAGGTTACAAATTTTGATCAACTGCAAAAACTGAGTGAGCATAAAAAACCATGCACAAT
CATAGAATAAACAGAAGATGCACGTACCAATAAATGGACAATCCTGATGGCACTGACAAA
GAGAAGTAACCAATCATAAATGGAAGAAATTTCAAAATAAGCTGTGTATTCTTCTGCGAT
GGATCAGTACTCTGCAGCAATCAAAAGTATCAAGGTTAAACACTGGAAGCTTGTACAATG
GCGCAATGGCGGATTAAAGAGGCATTCACCTGAGGTGGCTTCATGATCTCCATGGAGACA
AACTGAGAAGCAACGAGTAGCACGGGCAACACAAGATAACATATCGTATCATGCCAGCCT
ATTGGCGGATGACCATCCTGCACAATTCATTTCAAATATTAGTATAACTTTAGCATATCT
CAATCATGCAAGCATATAAAGTAGTGTATTGTCACTTTTCTACAAGAATATGCTGAGAAA
ATAATATGTTAATACATCATTTAAACAAGATTGATATGCCACATGCCCAACGTTTCAGTC
ATGCTGCTAAAGTACAGATTTAAAATTAGACATAGCAAATCTTGTTGTTTCTCACAACAA
TACCATCAAATCCAATGTCGTTGGTTGAGTACAATTCAATGTGCTGCCTAAGTGGCTACG
CGTAGCAACAAACCACTGGTATAACTTGACTACAATGTTGCAGTAACATCATATTGCTAA
CATCTACGTGATGAGCATTGTCATAGAGGAACGAGATAGGCAAAATCAATCCTAGAACCA
GCATTAGACAGTTTCACATAGATTGATAAATAAGCAATTTTATTACCACAAAAGGAAAGA
GCCATGAAATGCCAGCACCACTTTGACGAGCAGCAATTGTTGTAGGACCTCCCAAAGATG
GAATCCAGAAAAATCCTTCTGTCAACAAACCCTTCATGCCAGAGAATCCACTCAGTCCAA
AATATTCTAACGAATCAAACTTCAAGAAGTAGGATCTGGCATACCTCATTTGCTACATTT
GAAAGGGCTTGGTAAAGTCCAATCCAGACTGGAATTGTTGCCAAAGTTGGCAAACATCCT
GGAGAGAAAACATTGAGATCAAGACGCTGCATTACAAAAGAAAGTGCAATAAAAAGCTAA
CTGGTTTTGCATTTCGTGATAGCAATAATGGCAATCAATCAGAAAATAATAGAAAATGTG
ATCAGCTAATATGGTTTGTTGTCGTTCAAAAGTCAGTAATAACAACGGATGTCTTTCAGA
AGGCAATAATACTAAAAATATGAGGTGTGCCGGAAGAGTCATTTCACAATTGAAGTAACT
TGATTTAGGAAGAAAAGGAAAAAGAATGCAAAAACCTGCTAGAGGATTGACTCCAGCTTG
CTTGTACAAACGAGCAGTCTCAAGCTGTATTCTTTCCTAATAAGAGTTATGTAGAAGCAA
TGGATCAGATATTAACAAACAAAAAAATGTGCCTGAAAGTATAAAATCAAAACAATCTCA
TTAAGGAAAGCATATATGCAGTATATCACAGCCTTATGCAGACATATGCCTGGAACCGAA
GCATAAACCTCCCTACTATATATCCATAATTGAAGTTGTAGCCAAACAAGACAAACCTGA
TTGCCTGCGTATCTCGCCTGAATTGCCTTGAGCTGTGGCTGCAAATTCTGCATCGCCATG
GTTGATTCGACCTGAAAACAAGTAAGCAGCACCGTTGAATTCTGTTCACAGATAGATAAC
TAAGGAATGCCCATCTGGTTTAACTCAAATCAGGTTAGAACATCCACCTGCTGCTTCGTT
AACGGCAATGTTGCAGCCTTCACGACGATGGTGAGCAGAATGATGGCAAACCCGTATGCG
TACGGCACATGAACTGCTGAGAGACCATCCTTCAGAATCTGTACAGGGAATTTCAGATAG
CATCAGAAATCCAGCGTCGCGAAGTTACCGAACCGGATGCTACGCTCCTAGCCACTGCTA
AGATCCCAGAATTCCCAAATCTCTAGAATTCGAGATTAATTTCAGCGAAAGCTATATGCC
TAAGAAACGCACTCTGGGTAGCAGGGTTATGTAACAGCAAACCTGTCTCCATGTGGAGGT
AGCCCCAAAATGGAGCAACTAAGTTGTAGCAAGTTTCAGAGTACCCACACCACAAAGTGT
CCGTCAGACTCACAGGAAACTCGCATAATCTAATGGCAATTCTTGTGCGCACACAAAGTC
GCCGGCTACGGCGCGAGCGCGTACACGCTTACCTTGAGCACGACCTCCATGGCGTCGGAG
ATGAACCCGAACCAGCCGCCGCTCTTCTGCACGGCCGTCCCCGCATCCTCCCCTCCCCCG
GCCGCCCCGG