morexGenes - Barley RNA-seq Database

Contig contig_74622

Source Contig contig_74622

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_74622 (1879 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_74622

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77172	3	716 bp	AK359543	Available	Available	None

CDS Structure of MLOC_77172

Contig Sequence (1879 bp)

>contig_74622 1879 assembly3_WGSMorex_rbca.fasta
GCTAGTAATGCAACCACCGCTGAGGACACAACAGAAAGATAAGCCCAACTGTCAAGTTAG
CTTTGGAACTACGTGTAAGAAAAACTAATGCCCTGGAATTATGGGATATCATTGGCATAT
ATAGTATATGGAGGTCACAAAATTATATTTTAGTGGTGACCCCTTTCTATCAATACTAAT
ACCATGCCTATAGAACCAAGAAACACATAAAACATAAGTCTGGTTTTAGGTGGCAGCGTC
AATGCCGCCACACATTGCAAAGCGTTTTCAAAGTACAGTACAAAACAGAGCATATATGGT
AGCTTCCATAGGTAAGCGGAAAGGGATTAATAAAACTATACTACACTGCCATGTTACAGA
TATAATATCAGGGAAAATAGTTGGAAACTACAATTACACAACGAATTTTTACCTGGAAAG
GGCAGGGTGCCAGATCATCAAACAATTCGTCTTTTGCATCTGCTGCATTAATGGAATACA
GAGCATTCTTTAACCCGCGCGCAGCGAGATACTCCTCGGTGTCTTTACGAAGAGAATAGC
CTTTGTACACAGTCACAGAAGGACCGCAGACCTACCAAGATAACTTTAAAATAATAAATG
TCTATTGGGATGGTAACAATAAGTTTTTTTCATTGAGTATCGCATTATCAGTAACAGAGA
GATGAACTTTGCAGCAACACAAGAAAGAACACAGCGGTTTAAGCAATCCTATGAGATGCA
GTCTCTAGAGCAACAATGATATTAGCATCTTATGAGATGCATGAATACAGATCAGGATTT
ATGTGAAGTATTACGTTATCCATCATTTCTTATTCCATGAAGCATTTAGCGGTGCAGTTA
TATCTTCTTAGGATGCTAACATTTTCTTCAAGGGAGACGTTGAATGCAGATAATCGTCAA
AAACAATTGACTGAATGCTTAGTGTAATAAGTTGAGAAGTAAGGAGAAAGTAAAACAAGG
ATTAAAAAAAAAATAGAACTCCTTACCGAGTTGCTGACTTGAGCTTGGCAGTCGGCGAGG
TTGTTATAGATGCCAATGACATCCCCCTTGCGGACAACATAGAACGGGTCGCCGCCGGCA
GAGTCCATCGGGGGTGGCGTGGCCTTCTTTGCGGCGGATCTCTTGGCGGAGCGCTTGGAT
GAGGAGGAAGAGAAGAAGCGCTCGGCAAGGCCAAGGGCAATGGGCGGCACGGGAGGCCTG
AGGGGCAAGTAGCGCAGGCTGTGCTGGTGGTGGTGGCGGATGCCGCTCAGGCTCAGGGTG
CCGGCCACCGCGTGCCTCCACGCCGCTCTAGAAATCCCACAGAGAGAAGAAGAAGAATAG
CAACTCCTCATCGACAGCTGCTAACGCGAAATGAGAGGGTAGCCAAAATAGCACTGGTGA
GAACGAAAAGTTTCAGTGTACCACTGAGGCTTGGTTTGGACGGCCGTATTGGAGGGCTCC
GTGTTGAACTGGACTGCCCAATTGCGCTTCTTAAACCGGCTTGCGGATCGACGAACACTC
GGCTAATCTGCACAATGATACGCAGACAGAAAAATCAACTTGCTGCACACCAGAGGCAGT
GGGGATTTATTTAGAACTAGAAGTGCCGAGAGAGCCACGCACATTAAATTCATAAATTGT
TTGCAGAAGCTTAAACATGGAACCAAGACAAATGGTGTGTGGACATGAACAACAGGGTAA
GCGAGTACTGGTGAGAGAAGTGAATTTTGCAGGTTCATTGCTGGTCTCGCAATGCGGGGA
AGCAGCATGAAGGACAAGCACTTGCTGGCCCAGTGAATCCTGGAGAGGTTATTTCTGACG
AACATCTACTAGTACTTGCTAGTGGTAGAACAAATCACAATTAGACAGTGTGCGTGCAGG
CAGGACACGCGGAGACCGG