morexGenes - Barley RNA-seq Database

Contig contig_74498
Source Contig contig_74498
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_74498 (8389 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location
Predicted Genes from contig_74498

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_77136	2	1767 bp	AK365254	Available	Available	None
MLOC_77135	1	1174 bp	MLOC_77135.1	Available	Available	LOC_Os07g36850.1, FRAME:+2, EVALUE:2e-12, 13107.m03784 protein transposon protein, putative, Pong sub-class
MLOC_77134	1	825 bp	None	Available	Available	None
CDS Structure of MLOC_77136

CDS Structure of MLOC_77135

CDS Structure of MLOC_77134

Contig Sequence (8389 bp)

>contig_74498 8389 assembly3_WGSMorex_rbca.fasta
TATCTTCAACCGATATGGATGGCGACGTGCTGATAGAATAGGGAGTTAGTCAACTACGCC
TATTTATATCATCGGTTTTGGCGTTGGTCGCCTTGTAATTTCTTTTCGCAGTTTTTCGAT
CTACTTTGTACTTTTTTTAAACTGTTTCCGTACTTAATAAATGGCTACATGCATCACTCG
ATGCAGAGGCTGGGCGATGCCTCCTTTTCGAAAAAAAAACGCACACTTCAGCACCTTTGA
GAGGCTGATTCGGATCTATAGATTGATGAAATCCCCACGATGCTTCCTAGTTGACAAGCA
AATCATACGCTGAAAGAATAGTGTCTGAGAACCTGAAACAAATTTAAGAAATATGCAAGC
ATTCATACCAAATTTAAAAGTTGAACCCACATGGATTGGTTCTATCATAAGAAATCTAAC
CATCTAAGCTTATGCTTAGTCATGTACTAGCTTTTTGAAACAATAAAATCCAGGATTCTG
CCTTCCAGGTCCAGATTTATAAAATAAGTAAAAGTACAAGACCATGAAACTGTTGGTGCA
ATATACTGATAGGGATGCGTGATGCTCCAGAAATCTTTAGAATGGGACACGGCAGTTCGA
ATGCTTAAGTATATACCTAGGGCGACAACATACATTCATCAACCCGTGTAAAGCCATGGG
ATAGCCATCGAGCATGATTGACTACACGCAACGGCGAGTGCAGTTTCTCCAGCTTCGCCG
GCAGCGTCTTCCCCGTTCACCTCCTCAGGCCGAGCAGAGCGAGGACCAGCGACACGTAGT
CATAGCGGAAGACGTGCCGCAGCAACCCGAGTTTGCTTTCGTCGTTCCACGGCGGGTATC
TGAACATGAACTCCACCAGGAAGCTTCTCCTGAACACCGCCTTCTTGTGGCTGAACATCT
CGAATGAGTACTTGCCGTGGTACTGCCCGAACCCGCTCTGCCCGACGCCGCCAAACGGGA
TGCTCTCCAGCCCGTACTGCACAATTGCGTCGTTGAAGGTGACGCTCCCGGACGATGTTT
CCTTGATGATCTGCTGCTTCAGCGCCTCGCTCGTGGTGAAGGCGTAAATCGCGAGCGGTT
TGGGCCTGGAGTTCACGAACTCGATGCTGTCCTCGATCTTCTTCACCTGCAATCACAAGC
ATCACATGTTTGCTCAACTGTCGGTTTCAGTGAAAGTCTGCCACTGTTGTCGTTGATTGA
TGTACCGTGATGATCGGGAGGAGAGGGCCAAAAATCTCCTCTGTCATGACATCAGAGTCG
AGTGGTGGATTGAGCAGTATGGTGGGCTCGATGCTCCTGCACCATTGGAATCATGGTATA
AGACAGACAGAGACACACGAAAAGCCAAGTACTGCAGCGTACAGGGAGAGCCAATAATAA
GAAGCTAAACACCGAGGCTAGGTGCTGTGGAGGAACTTACAAGGTCTTTGGGTCCAGGTC
TCCACCATGTACAATGGAACAGCTCACCTTGTGATCCTCCAGGAGGCCACTCAACCTATT
GAACTGTCTCTCGTTCACAATGCGCGCCATGTCCTCTGGTTTCGTGAAGAATCTCTCGAG
TGTTGATTTCAGCAGCTCAATCTTAATTCAGAGAATAACTATATTGTCAGAACGAAAACA
GCAAGTAACTGGTCTCATGACACAAGAATAATTCAGCAGAAACTAGACCAGAATCGGTGC
AAACTGTTCCTCCACGAGTATGTAATCGATGGCTATGCAAGCTTGACCGGCACAAGTAGA
CCATTTCCCGCCTATTATACGATTCACAGCAACCTGGACATGTTGAGATGCTTGTCGTAA
GGTTGTTTTATCGGCACCTTAGGAAAACCGTAAACCAGGACGCTTACCTGACTGTCTCTT
CTGCTATCCAGCCAATCTACAATGCAGGGGCATTTCGAGCCAAGTTCAAGCGCCACTGGG
GTCAAGTGCTTTGCAGCTTTTGTCATGATAATGCGACCTACACGGGCACCCCCTGAACGC
CAACAACAGAACAATGATCATCAGAATACGAATGCCTTTTCTTCAGAAATCAGGGTCCAG
ATGATCATCAGAATACTGGCAGGCTTGGAGTACCTACCGGTGAAGAGGACCTTGTCCCAT
CGGTGCTCCATGAGTTCTTGTCCAACTTCCGGTGCACCCGGGACGACCTTCACAGCCTCG
GCGTCAAGGTATCTCGGTATGTTGGCAGCCAAAAATGCTGCGGAGGACGGCGCGAGCTCC
GAGGGTTTCACAACCACGGCGTTGCCAGCCGCTAAAGCACCGGAGAGCGGCTCAAGAGCT
AAGACTGCATACATCATAAACGAAAGACGGTGGACATTTTGATTATGATGAAAACTACAA
CAGTTAAAGACTAGGTTAAATACAGGTGTATCTGATTAAAACGTGTCTAGTCTAGATACA
TTTATATGTAGATAAATTTAAAATAAATTTCGGTTTTTACCTCTTATTTTAACAGTTTTG
ACACTAATTACCCCATTTAATGAGATTTCATTCGTTTTACCCCATTTAGTAAAAGTTCTG
TCACGATTTATCCTTTTTAAAACTTTGTGAGCGTTCTGTCAGATAAACCTTTTTTCCTGC
CTATTTTTCTGTCTGCTGAACCGGTCATCACAACTTCTTCGGATCAGGCCCGACCCAACC
CGATGAAGGTCGCTCGCATCACGTCCAACATACAATGTCTGAGTCGGCCGCGCGCCACAC
TCGCCCCTAATCGATTGCATCACCCATTCAGGTTTCTGATTGCACGCACCCATCAGGCTG
GCTCGAACATAGGTTTAGGGATTGTCAGGCAGCGACGACGACGATGGCAGCGCGATTTCA
TACCTCTTCGAGTAGGGCTATATGGCCGCAACATCAAGGCAAGATACGACCCATGGAGTC
TTACAATTCCGTCAAGCTCGCCGACGTCTTTGTACTTTCTACTTTGACGACATAGCTGGA
CACCATCAGGTTGTGCTCTATAGATGGCGGGTCTATGGCCCTGTCATTCGTATCCTATTT
CATATGATTTTGATCATCACTATCATAGCAATTTGTATATTCTGAAATTTCCGTGGTTCA
TGCATTGGGCGATGAGGCATTTGATTCGGGCATAATTAAGATGCTTATTAGAAGATCACG
TGTATACGTGTCACCCTTCTAAAATCAAGTTATGCATTGGCCAAGTGACGCGAACGAACT
GTATTGGTGGGATCATATCGGGCCCGCCAGGTCGGGATAAGCTGCGAGGACCGGTTCAAC
ATGGAGCAAAATAGGCAGAAAAAGCCCATCGATTTGGCATGCCAGATGAACCTGACAATT
GGGACTTTCCCATCCAGACGCTCACAAAATTTTAAACAAGGTAAATTATGGCATAACTTT
TGCTACTCCCTTCGTCATAGTTTAGAAGGCATGCACGTGTACCTAGGTCGTCAATTTAAC
TTACGTAAAAATATTGTTTAACATAAAAATTATATTATTAGAAAATAGAACAACTAAAGT
TTCTAATGATATGTTTTTTTATAATATATGTCTTTAATTAAGTTGGTCAAATTGATGACC
TAGATACATGTGTTGGACTTGTAAACTGAGAAGGAGGGAGTAAATGTGGTAAAACCGATG
CAATCCTATTAAATGGGGTAATTGCTGTAAAAAAATGTCAAAACATGGGGTAAAAATCGG
AATTCACTTATAAATTTAATACAAGTAATTTGGGAGGAAGTGAGTGTGATTTTGTCATTG
CAAAAGAAGACGATTACATTAAATTTTATCAGATTTCCTTTCACTAGAGTATTTCGATTT
ACCGGGCAGACAAAACCGCTTGTTCGCTCTCTCCGCTTTTGGGGTATACGCATGTGCACC
TCCTATGCACACTATGAAATGCTGCTCATCATGTATGACATGCTTAGGCTTTTGGGATAT
ACGCATGTGCACCTCCTATGCACACTATGAAATGCTGCTCATCATGTATGACATGCTTAG
GACATCTTTATAATGGACCCGCAATCCCATGCATCCATTGGGGCACGTTGTCTGGACTGT
GATCGTCATCCAATGTAGACATGTATAGTTTCGTGGGACGATTAGGACACCATTTTTCAT
GTAAATCAAATACAAAAGTGGGGGAGCTTTACGGGAGTGCGGACATGAGAAACGTCGATA
TCCATCACCCGTGGCCCACCCAAAACCATTTACGGACCCCATGACTCCATACCTTTTATT
TTCTCTCCTTCCTTCTTTCTCTCTTGCCTTCGCCGCCGCTGCACCACCCCGGCCACCATG
CTACATCCTAGCTGGAATTTTGCGTCTTCGTGATCACCCTCCGGCACTCCAGCGGAGCTC
CTCGCCGCTTCTCCTCTGTCTCCGTTCAACTAATGCCCTCTGACCGCCCCGCCAGGTACT
CCGATGAGATGGCTCCTCAGACAAGGAGGAGTACTATGATGAGACGGTGATGATGCATGT
GGTCCTTAAAGGCATGGAGCATGCAGAGGAGCATGTTCTCAGTTTCAAGCGATCAGTCAA
GGGTCATCGAGTGCTCAACCGCAACAAAGCACGTAGGCATTTGACACTTATAGCGGACTA
CTTTGCCCCCGATGCACTATCTGTTAACCATTTTCATCGGCATTTTCAGATACGTAGGAC
TGTCTTCAACCGTTTATACCATGGCGCGCGATCATACGATGACTACTTCATCCTGAAGAA
GGACGACGTGGGAACGATTGCTTTCTCTGGTTACCGGAAGTGCACGGACCCAATCCGGAT
GCTTGCATATGGCATGTCCACTGATTCGTGGGACTAGTACCCGTTATGCTAAGTCCCTCC
ACATGGAGGTGTGTTGGCAGCCTAACATCAACCCATAAGTCCAACACATGATAGCCGTTG
ATCCTTACTGCATCCAACGATTGAGAGTGCTTCGAGGGAAGGGAAACAAGAAGAAAACCC
TAGCCACTCCACCCATGCTGGTGGTGGCTAACATTCGTGAGAGTGAGTGAGAGCACACAA
AGAGAAAACACAACCTGTGAGAGAGAGGAGAAGAAGTGGAGGTTCTGTCCAGATTTGCAG
CATGTAACTAGAAAGTGTTCAACCTCCTGATTGGAGGCTCGATCAAGCGTGCTTGGATCG
ACCTCGAACTTGGTGAGGCCATTCATTACTTTGAGTAGTTCGATCTAGTTAGCTGGTTTG
AGGATTGAGTGAGTGGAGCATCAGATTTTAGAGTGATTTTCATCTCTGACTACTGCAGTT
TCAAAACAGAGTAGTTTTGGGAGACGAACAATTTGGGTAGGCAAAAGGTGTCCAATTGAG
CTGAAATTTTGAGGGGATCTCAGGAACTCATGCGCTAGCTGTCTGCCAAATTTGGTGTTG
TTTAGTTTAGTGTTTAATAGCAGCTTGCAAAATAGTGAAGGGGACAGAAGTTGTGTGTAC
TCTACTTTGCTGAAATCTTGCCTCTTGTGGTTGTTGTTGCTCTTGCCGGTTAGCAATGTG
TAGAATATGTTGTAAATATCTCTAGAGGTTCTATAGAAGACTTTATACTCATAATTCTAA
TAGTGAAATTGTGTGGACCGGTCCGTCCACATCCATGGTTTTTTACTCCTCAACTTGAGA
AGGTTTTTCCACGTTAAATCTCGTGTCACATGTGCATGTTGTTTCTGTTATTCCGCTGTT
TACTTCATTGTTGAGCTGTTAGTAAAGTTTATCACAGGTGGAGGGGCTGTGTAGTATGCA
TATTTGTTATGAGAGTGAATTTGTGCAGGTCATTGTTGTTGTCCAGCTCTAACAAAGTGG
TATGAGAGCCTTAGTTTGCTTGTGTAAATTGCCGAGTTTCTTGTGATGAAAGATGGAAGT
GAATACCAGCAAAATGGTGTTTTTGAATGGTACACATTATAAAGCATGGAAGGGCAAGAT
GGGGGACTTGTTATATGTCAAAGAATACTGGAATCTAGTGTACTCCACCGAGATGTCGGA
GGGCAATGATGAGGAAGGTCAGTGGAAGGTACTTCATCGCAAAGCTTGTGGGTTTATTCG
GCAGTGGGTCGATGGCAATGTTCTGAACCATATCATTGATGAGACACATGCACACACTTT
ATGGTAGAAATTAGACGAGTTGTTTTCCTGAAAATAAGGTACAAACAAGATATTCTTGAT
CAAATAATTGATGAGGTACAAAGAGGGCATTCTAATTGCAAATCATGTGAATACATTTCA
AGGCATTATAAATCATCTTTGTTCAATGGGAATTATATTTGAAGATTAAGTGAGAGCCTT
TCTTCTACTAGGCTCATTACCAGAGAGTTGGGAGACCTTTAAGGTCACTATTTGCAATTC
AGCATCTAATGGGGTTGTCACTTGGAATCTTGTGAAAACTAGGTACTAAATGAAGAATCC
AGAAAGGTGGCTGAAGCAAGTTCTTCCTCACATTCAGAGGTGCTAGTCACTCGGTCCAAA
GGGAGAAGCAAGAGTAGAGGTCTAGGTAAAGGGGAAGAAAGAGGTAGGAGAAAATCAAGA
GGCAAGTAAGCTGATTATGAGTGCCACCATTGCAATCAAAAGGGCGAAATTAAGTGGCAA
TGTGACAAGTTGAATAAAGAGAAAAAGAAAAAATGAGAAGCTAGAACAGAAGCAAGCTGA
CAGAGATAGTGACATAGGGGCAACCGAGTTACTACAGTAGAAGAGGACACCATGCTTATT
ATGCATGAAGAAAATGAGGGAAGGTTTGGTTCCACTGTTGAGGAGAGGATCACTGTTGTT
TCTGATGAAACTGTCAACCTTGTGGGTGGTGTAAAGATGATTTGGATACCGGACAGTGGT
GCTACCATTCATGCTACATCTTGCAGAGACCTCATCAGTAACTATATATGTGGTGATTTT
GGTGTTGTTTAGATGGGGAATAGTGATAAGGCCACCATAATTTGGAAAGGAGATGTGCAT
TTGGAGACCAAAAATGATACAAGGTTAGTTCTCAAGTCTGTGACGCATGTTGAGGCACTT
CTTCTCAATATTAACTCACTTGGTTTTCTTGATGGAGATCATTACTTGAGCAGTTTTGGT
AAAGGGCAGTACAAGCTCACCAAAGGCAACATGTTGTTGCAACAGGTAAAATGGTCTTAG
TTTTGTATCATGTTCATACTAAACTCTTTAGTGATTATGTCAATTGTGACAGCGTGAGAC
CGACGCTCCAGAAGATTCCCCTTTTATTATGTTTTCGTCATGTGGTTCGTTTGTCTGTCG
CATTCATCATCGCATCATGCGCATAACCTGCATTGAATCGGCACTCCGTTGCCGTCAGTT
TTCAAAACTTGCATATATTATTAGTTTCTGGTTCTTTCCGTGTTCATCGTTGTCCGTTTT
GAGCCCGACCACACACGCACGTGCCCGCGGCATCGATAAAATATTGTTTTTAAACGTGTG
CAGAAAATATTCTCGGATTGGGTTGAAACTTGGCGTGCGATCTTAATATAGTGTAGGTAG
ACCGCCTGTCAAATTTTGTCACAATCAAAGTTTGTTTGATAGCCGAATGATCGACCGTAG
CGGCACCATCTTCCGTTAACATTGGACGTATTCGTTTTGTAAAATTGTGTCACGGGCCGC
ACAATTATTCCCTCTCTTCCCCACCTAGCCCCTCTAACACAACCACCTAACTCTAGGGCA
CAACCGAAGCCGTCCGATTGAGATCGGAGGGTCCGAAAAGGCCCCAAATAGCAAACCCTA
GATACCCCCGCTATAAAAGGAGGGCTAACCCTTCCTAGATGATCAAACCCTAACCCTAGC
CTCATTTTCCGTGCCCCCCAGCAGCCATCCACCACTCCACCTCCACCTCTCCCCTCAGCC
GCCAAGGGCCCGCTAGGCCCATATGAGGCCCGCCTCGGGCCCGGACATAGCCGCCTCCGC
TAGCCAAGGAGCCTCGTAGCCCCGAGCTCCCCTAGCTGCCCGCCCAGCCTCGCACTGGAT
CTCGTGCAGGTCGCCGCTCCAGCCGAGGCCGAGTGATGCAGATCTGTCGGCCATCGCCTC
GAGCCGCCCGCGCAGCTCCTCTCCACCCTGCCGCCGCCCAAGCTCTGCGCCGCCACCTCA
AGGCCGCCACTAGTCGGATCCCGCCGCTGCGACTGCGCCACTCTCGGATCTGGCCCGTCC
CTCGCCGGTCCCTCGCCCCTGCCTCGCTGCCGTGTGCTGGAGTTCGAAGCCGCCGCCGCC
GCCCTCGTCCTTGGTCCTATCGGGATCAGGATGACTAAGCGCATCCGCATTCGCGTTGGT
CTGGGATGTAGCGCCCTGACCCAGCCGACTCGCTTCGCCCCCCCCCCGCCCCCGGGCCCC
CGGGGGCCCCAGCGCGCGCCAACGACACGGGGGCGCGGGGGGTGGCCTGAATACACCACC
AGCTACCTTTCGCAGAGTTTCTTGTCCCCCCTCGAGGCGCGAACAATAC