Contig Data
morexGenes
Links



Map Locations of contig_7422 (5360 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7422

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_77080 1 1138 bp AK372669 Available Available None





CDS Structure of MLOC_77080






Contig Sequence (5360 bp)

>contig_7422 5360 assembly3_WGSMorex_rbca.fasta
CCGAGCTCCAAACGTCCGCACTCATTCAGAACTCGTAATAATATGTCTATTCGCCAAGAC
TTTTGAAGGCAAAGTTTTCCACATATGAATCTTAACTTTTGAAGGCACACGGAGATTTCA
AATGGTCCTCCAAACTGGACTAGTACTTGAGGCTTGTATCAAATTCGTCATCCTCAACTT
TCATCTGTGTTAGTACACTTACTTAACCTTGCATCAGATTCTTCTGTCCCTCGATTTTAA
TCACGGTGGGTCCCAGCTGCTAATCCTGGTCCAATTAACAACCGCCACATCAACTTTTAC
CTAGAATCTGGACGCAAGATTACGTATGTGTAACATTGCTAGTTACACTTACACCACTGC
AAAGTTTTTTTAGTGGACGTCCATGTTTTATTGATTAAGCAATAAAATTATGCAAAATCT
TTCTCATACAATCCGAAGCAGAATAGAGAACACAAAGATCATTAGAGTTCAAATAAGAAT
TGTCGAGGGCGTGAGAAGAATACGATGGTCCTAATGGTTTCCTAGGGAGCATTGTCCTTC
CACACCGCTTCAATTAAGACGTACCTCTTTTAAAAAGGGGGAACTTCGAAAACACATCCT
CATCTCCATCGACTCCAGTTGTGGTTATTTCTACCATTTACTTTGTGCGAACTATATTGT
ATTTGTATCTTGTGCTTGTTTAGAGCATTTCCAACAGTCTTTGTATACTTGGCTAGGATT
GCTAAAAAACTGGAAATTTAGCAACTTGACCCAAAAATGTTGCTCCAACAGCCTTTGTAT
AAGTGGTCCCCACAAATTGTTTTACAAAGCTCGTTATATTTGCATCCATACTTGGTATAT
TTGCAAAGTGTAGAGGCACTTCTATAATTTTTAGCAGCCCAGTTTTTATGGTCCCCTACA
TCCCTTTGTTCCATTGATAAGTGGACCCCACCGCCTCCTAGATTCCCGCAGCCCTGGGCC
TGACACAGGTCCACACGTGTCATTGAAAGGCTTGCTAAATTTTATAGCAATGTTGTTAGA
GCAAAAAAACTGTTGCAGTTGCTAAATCTTATCTTTCCTCTTGCTAAACTCAGTTTTTAG
CAAGTGAGAATAGCAATGTTGTTGGAGATGCTCTTATATTATTGTTGTTGAGCTGATCAT
ATAGGTTGTCCACCTAGTTGTATATTTAGACAACGTATTTTATTGTTTAGCCTAATTTGT
TAAAAGAAGTTACAAATTGTTAGTCACCTATTCATCCTCCCTCTAATCGACCATATTGAT
CCTTTCACACCCACATGTGGAGTTTATGGAGAATGGTAATGATGAATATACCACATGATA
CTTTCTTGCTGACAAAATCTAGCCTTCTTGGCCCACTTTTTCTGAAGACCATTTATAATC
GACAAGGTAGCCACACGAATTTGCAAGAGAATTTCGGTGAGACAGCATCACGATAAATAA
TTCAGAATGGCACATATTAGAAAATTTAAGCAAATTCGAATTGGGAAGTCCAAGATTTTT
TTTACCTCAAGCTTGGTGTCTAGGGTTTTGGCAATGGCGTGGCGAGCTGAGAGAAGGCGA
CGGTCCTCATGGAGGGGTGAGAGGACGGCGATGTTTGCACGGCGCAATCACAATGGCGTC
AGAGGTTGCCGATGCAGGGCTGTTTCTAGAGGCACTGCTAGAGATGCTCCACGCAAATTT
AGAGGTTGTATATCTACTGGAAATCAACGATACATTCCCTTACAGTAGCAGTGAATGGAT
AATCTGGTGCTGTCAATGATTCGTCAAGAAGATCATGCAATACAATCAGCTCTGTGGGAG
AAAATAGAGCTGAAAGGGAGACTTATTTGCCCTGACCTTGCATTTTCCGTGTGCCCAGGC
TCCAGATCTTTGGGTGGTAAGAGTAAAGCAAATGATTGCACAGAAGATAATATACATCTA
TCGCACACGTGAAGCAAATGATAGCACACATCATAAGAGTTGATACTGGTCAACCCCCAT
ATCCTTGGAGATGCAGACTTGAAGATCAAGGGGTCCCAAGACTTGGCCTCAGACCTGAAA
GAGGCTTATCTCCCTCCTATGTCCACGTAAGTTTGATTCCTGAGAACCAAATATCCAAAC
TGCAAAAACAGTTTAGGGTGAAATCCTGATAGTCCAAAGACCCGCCTGGCATCGTTGTAA
TCCTGATAGTCCTATCCTGAAAGCTACAAGTGATTTCCAGCCAGAAAAAACACACCGGGG
CAGATACGTGTATCATATACCGGACAGATACAAGGGGGAAACCAGAGTAAATATTACAGG
TCTAAAAGCGACCCAAGCACAAAGTATTTAGAAAGAAACGATAATCCAAAGAACCACTCC
TGGCCTTTCCTAAGAAATGCTTAATGCTACCATGTGCAGACTTCTATATGCATTGTTGAG
CTTATCCTGACATATCCAAAACGTCCTGCTGCGTGAAGAACTTTGGGTTTAATTTTTGGA
TTCTAGTTTATACAGAACAAAAGAAATTGATTCTACTAGGGTAAGTTACAAAAACAGTTT
TCCACTTTTGATACATTATCTCCTGCACACCCCCAGCCTACCATCTAAGTTGACAAAGGA
TTGATGAAACTTTATAAAATCATGTTGACACAATAATAGAGGGATAGAAATATAAGAAAC
CTCTACAAGACCAAGTGTTACACAACTCTGTATAATATCAAGTCCTAAATGTCTTTAGCA
TGATGACACTTAGTTTGAGGTCAACCAATATTGCAGTATAATCTCGCTGCCACCACCTTT
TTTATTTAATTTTATTTAAATAAGGATTTCTCCCCTTTTTCCAAGAGTCAATTTCCACGC
TTTTGAAAGTATGATGGTAGATGAAGATAAGCAAAAGTACATAATCCATGGCACTGTTGC
GAATTGTGGTACAGGCAAGGGTGTTCTGTCAAGATACGGTGAGGGCTAAGTGTAGTATTG
GGCATTAAGCCTTTCCAGCTGAAGGTTCATTCCGAGTCTGTGCTGTCTGAAATATCAAAC
CCTGACTCTTGCTAGTTCAGTTCGTGTTTTACGAGAAATACTTGTTCCAATTCACGACTG
GCATAATGTTCTACGGATTAACAGATGGAGTAAAAAAGAAGATCCGGTACTGGTTGTCAC
TTGTCAGGTCAGTCTTAGCTAACAAAAAATCCCTTTTGTGGCAGCATAGTATTTCATATT
TTGGTTGGAGTGGAAGTTGGCACTGAATTAAAACATCCAATATCCACCTAGACAAAAAAA
AAAGGAACATCCCCTTCCATGAAGGCCTAAGAGTTGTCTCCTAAGATTCTTCCTATTTGC
TTACACAGCTCATCAGGTCACAAAAACCAAGCATCTCATAGTGAAAAGCCTATCCACAGG
TTTACAAAAGAAAACCACAAGGTCCATGGTAGCAATCAAATAAGAGGTTCATAATTAAGG
TACCTTGAACTTGTATCTTGTATAATCGACTCCAAATTGTCATTCACAGTTTCAGGCTTT
CAGCTAGTCAAGCCAACTAATAATGTGTGAAGCATGCACAAAAATTAAGTCATTCAAATT
AACAGAAGTGGGCAGCAAACTTATATTTAGAATTCTACCAAGAGTAAGAATCACATACAT
CATAAGTAGCTAACCATGTGGATGAAACACCAGATAAACCATTCTTAGTGTAGATGAGAG
ATACACACTAAACGATCAACAATCATGGACTGACATTGTATGCTAGAAAGAGAATTCATA
CCAGTGCTCTGTAAACCACCAATTGGCATGCAGTGAAATGGGACAGGACTGAGTCCAGAC
TTCTGAACCACCAATCATGGACTTTCATTATAATAGACAAACAAAATATGTGAATACAGC
ACCGACCACCAATTAAACAATCCAACACAGAAAGATATGGAATCTATGTCTTATTATTGC
ACAAACTATCCATTAATTACTGTACATTGGTAAGGATCTACATCAATAGATAGACTCATA
CATATCATCCCTACACACTTGAGTTGTTTTACAGTCAAACAATTACACAAGAAGCATAAC
CGACAGAAGCTAAACCAGTTAGCAGTGCCAGCAACACTGCAACAGTACTACCCCCACAGA
GGCTAAACCAATGTGTCACGCAGTAGAGCTGGGCCATAAAAAGCTTCACTAAATGCACAA
CAGTAGAGTTCTGAAAGAGGATCACAGTACCTAACATGTACATCATATGTGGGCAACTAG
GACAAACACCTTGGCCATAAGCAGACTATCACACTATATAACATATATGAAAGTTGTGAG
CTGACTAAATTTTAGTCGAAGTTTACGGTCCAACCATGGGACATGGCGTATAATGATCAC
TATTGTTATAGGGGATTTCAGCTGCAGTACTGCAGCTGTTTGTGAAGCTGCACTGAACAC
TTGGCAAGACAAATTTTCAATCCATTTAAGATATGTACCATTAGGCATTTGGTATGTTGT
TATTGTACAGACTTCTAAAGTAACTTCAAAGTGCAAACAATACACAATAGCTATGTAACT
GATTATCAGTATAAATACTCAAATAAGGTATGCACCTGGCATGACAACCACATCCTAGAC
CACAAAAATAACACCATACGATCAGAAGTGCGGTAATCCCACAAGTGTATCCTAACGACG
ATTCACCAATTCATCCCAGCACAATACACATGCCGAAGAGGACTCGCGGCCTAGAAGTCC
ATCTGCAGCCATTTCTTGTAGTAGACACAAGTGGGTGGTGAGATGACCCCATCCGGCGAG
CACTCATCGATCCTGGGACAAACCCCACATGGAATCCCTTCTATCATGCCGCCCTGCGGC
GCACCACCCCGCCGGTAACACACCCTCCCGGCTCTGACCGCGCTGAATTCTCCCTCCCCG
GTGCTCCTGCACTCCTCCAGCACCCTGTCTAGAGCCATGGTCTGCAGGATGTCCCTGATC
TGGTCGATAGAGTACCCTGCCCTGGGGTCTTCCCTCTCGACGCCCTTGTGGACCATGTCC
GGGGTGGCAGCGCCGAGCCTGTCAATCTGGTCGAGGCATCTGCGGCGCACGGCCGCCACG
GCGTCGGTATCGAGCTGGCCGTTGTGGTACCAGGTTCCGCCGGTAATCTCAGGGGAGGGC
TCGATGCGGGCGTCCATGAAGACCTTCTTCCCGCGGTGGCGGACATCCGTGACCTCCTTG
AGAATACCCCGCTGGACGAGGGCGCGGGTGAGCTTGGTGAGGGTCGGGGCGGCCAGCTTC
ATCGTGTAGCGGATGTCCTGGCTCCACATTCCCTTGTTGCCCGCCTCGTAGATGCGCTTG
TAGACCTCCCGCTCCGGCCCGGGGAGGTTGTTGAGGATGGAGGCAGGCAGGATCTCCGGC
CCGGGGGCGGGGACGGGGGC