morexGenes - Barley RNA-seq Database

Contig contig_73658

Source Contig contig_73658

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_73658 (2163 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012

Predicted Genes from contig_73658

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76958	1	516 bp	None	Available	Available	None
MLOC_76957	3	863 bp	AK370272	Available	Available	None

CDS Structure of MLOC_76958

CDS Structure of MLOC_76957

Contig Sequence (2163 bp)

>contig_73658 2163 assembly3_WGSMorex_rbca.fasta
CAAAAGAAGCTGCAAAGGCAATGTATGCTATATCGGCTTTAATCAGAAATAACGTAAATG
GTCAGGAGGCATTCGCTTTGGAAAATGGGAACGCAATGCTGCAGGTAGTGAAAAATTCTA
TCTTGGGAATACAAGCACATAACTGGTTCAGCTGTGACGAAATTTCCCACTTTTGCAGCA
CATCTTGGGAAGCAACAGTGTTGATGTTGGGCTTCAGAAGAAGGCAGTGTTTTTATTAAC
AGATCTAGCGGACTTTCAGCTAAATTCTGGAAACTCAGGGCTCACTTTCTTAAGTGAACG
CGTTTTGCTGAAGTCAGTCACTGATATGTTATCAGAGTTTGATCTTGACCTTCAAGAAAA
GGTATGATCAGAGCCACCTCTGACTCTGTAGATCACTATGATTAGCACTGGTTACCAGCT
CATAGTCTGCACTCTCAATGACAGTTGTTCCTTGTGTCATTTGGTGCATGAATTTGCATC
TTTCTTTTAGCACCTGGCAGTATAATTACGCATGGATTTATTGTTCAATGTTATTTCTCT
CAGCAAGGACTTTAGGAGAAAGTTGTAGAAATGCAATTACTTAACTCCTGTCAAGAAATG
GAAGTAACGACTACTGTAGTTCATTTGACAAAAAATCGGCATGCCAGCAGTAAAACCTAC
AACACTACTCTGTCACGGGTTTTGGCTGACATTCCGTTTCATTCGCAGGTTTTGTTGGCC
ATTAGGAGCCTACTGAAGCTTCCCTCGACAGACGCCAGGGACTTCGAGTCATGCGGTCTA
GACAGTGTTCTGTACAGACTGGGGGTGCAGCTGGAGGAGCTGCCTTCAGAGGACCAGAAG
GAGTATGCCGGGGAGGTTGACGCCCTCCGGAGAGAAGTGTTGATGTTCTTCCAACAGAAG
CTCAAGCCGGTAAACTAACATAACAAGGCATCCTTGCCAAAACATCATCAGTGACTTCCA
ACTGTCTGATCCTGAGCTAACTTCCCGCCTTTGTTCTGCAGGGTACCGCTGCCGCGGCGG
CGTTATAGACAGCACACACGGATGAAGGGAAGGGAAGCAGCCTGCCGAGTTTTCGATCCA
GTGACTCAGTGCTGGTTGCCAAGTTTTTGAAAGAGTAGATTATTTTCCGAAAGAGTCTGT
CTGCCGAGTTGAGTCCCCTCTTACTCTTGCAGGAGGGTTAATGGGTTATAGTGCTGTGGG
ATTGGATGGATAGATAGGTTAGACACTTGATAAGATATGGTTAGTTTTCCCATTCGCAGG
ACTAGTTACGACATCTGCTGTGTTACTTGGAAGGTTTTCCTTTTACTGGAGGAAGAGACG
ATGATCTTCCCTGTTGTGTAGCTCCTACAATGAATCAATGACTTTGTTGGAACGCACCCT
TGTCATGTGCTGTTTCCTGCATTTTGTGATCGTGATGTGGTTGCGACAGTAGACCTGACC
GGCCCCTGGGGGCTGGGGCAAGCGCAAGAGCTGGTACGTTTTGCGGCTCCGGCGTGGCCT
CGTCTGGGCCACCGTCTTCCTTGAACCCGGCTAGTCGCGCGATGCGGCCGCAACAGTCGT
GTGTCCGGCATGACATCGGCGCCAAACTTGCGGCGATTCAACGGGCACACGGCGCGGGGT
AAACGCATTCGCAGCGGCGGTCAGCGGAGCGCGTGCCGCGGACCCGTCCCGTCCCGTCCC
TCGCAGCAGGCATATCGTGCCCGTACCGTACGCCTCGCCTGCGCGGCGTGGTCCCTGGAC
CACGCGCCTCCGCCGTGACCACGCTCACCAACCCGCGCCGCGCTCGGCCCGGCCTCGTCT
TCTCATCACGGCACGGTTACCGGAAGCGGTAGTAGTAGTTGGCAGGCGCGGCGCACGGGG
CATGCCCACTCGCCTTGGCCCTTGGCTGGCGCACGGGTAGGTAGCCAAGCCAAGCCGCCG
AGACCGAGCTGCTCCTGCTCCTGCTCTCGCCGCAACCAACCAACCTTCCGCTTCCGCACT
CGCACTCGCACGGCTGGAAGCGGAACGGAACCCCCGGTCCTTTTCTACTCCCCTCCCTCC
TCCTCCTCCTCCTCCAGAACCCAGGCCTCTGACCTCTCCCCCCTCCCACCGCTCGCACGT
ACAGCGCGCATTCCTCCGCAGGGTCAACCCCGGCGGCCGGCCAACCATGGAGGCCGCGGC
ACT