Map Locations of contig_73588 (6167 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_73588

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76936 1 1425 bp AK355062 Available Available None





CDS Structure of MLOC_76936






Contig Sequence (6167 bp)

>contig_73588 6167 assembly3_WGSMorex_rbca.fasta
TCCCCTGCGACGTTCCCCAACACAAATATGGGAAGGGTGGCGCCCAAGAAGGGCGGGGAT
TATGACTTGTGTCACATCGGTGAGATATTCGGTAAGATTTAATGGGACCCTCTTGGATTC
ATTTGCACTGTCGTGTGGTCCGCGACAAGATGATCCACTCCCCCCCTTCTTGTTTCTGTT
TTTTTTCTGATGGTCTCTCTGCACTCCTTCGACAACGTGTGTACATGGGATCTCTGTTAC
CTGTAAAGAATTGTCGACGCGCCCCGGGCATCTCCCATCTTTTGTTTGCAGATGATACAC
TCCTTTTCTTTGAGGCCTCAAGAGCTCAAGCTGAACAAGTTAAGGATTGTCTTGATCTTT
ATGCAAATCTACTTGTCAACTTCTTAATTATGAGAAATGGTCGATTATGTTTGGAGAAGC
TTGCCCAGTCACTGCACAGGAGGACGTTCAGGATGTTCTGAATATTTCTGCCACAGGGTT
TGAAGAGAAGTACTTAGGGCTGTCAACCTCTAACGGAAGAATGACGAAAGGTCGGTTTCA
AAATCTTCAAGCTTAGCTTATGGAGAGGCTAGTTCAATGGGGCGGTGGGCATCTAGCCCA
ACCCGGCAGGGAAATTCTCAGTAAGTCAGTTGCAGAGGCACTACTAGTTTTCATCATGGG
TGTTTTCAAGATGCCCTTTTCGGTCTGCGATGATCTCACTGAGATGGTCAGAAACTTTAT
TTGAGATCGACCAAGGGGCATCGCAAAGCTCACTGGAAATCTTGGCAAAAGTTGCAACGT
CCGAAGTGCAAAGGTGGTGCCAGATTTAGGGACTATCGCCTCTTTAATCAGGCGCTGCTG
GCTAGGCAGGCGTGAAGATTATTGAATCGGCCTGATAGCCTGTCTGCAAGATTGCTTAAG
AGCAAATACTATCCCAGTGATAAACTGGAGGATACGGTCTTCTCAGGAAATGCCTCTTCA
ACTTGGACTGCAACCAGCCATGGCCTAGATCTTCTCAAGAAAGGGCTTATATGGAGAGTA
GGGAATGGGAACAACATCAGAATCTGGAGGGATCCTTGGATCCCTAGATCCTTCTCTTAC
AGGTCCATATCATCTCAAGGTACTTGCATAATTCGATATGTGTCTCACCTACTCCAACAT
AATGGTGCATGGAATTACAATCTGCTCCAAGAAACATTTCTGTCTTGTGACGTTCAGGAG
ATTCTGAAAATCCGAGCATCTCCTAGGCTAGAGGAGGATGTGCTGGCATGGGGACCGGCG
AAATCTGGAGTCTTCTCGGTGAAATAAGTTTATGAATTTGCCTTCGAGGAAACATATAGA
ACAACAACAGAATCTTCAAGTGCTGCTTCAGATGGTCGCCGCACGTGCTGGAAGCTTATT
TGGGGAAGTTTTGTGCCTCCTACGGTCAAAAAATTTGCATGGTGCGTTGCCATGAATTCC
CTTCAAACTTGGCAGAACAAATTCAAATGCACCCTAGAAACGACTGGATTATGCCCAATC
TGCGAGAGGGAAGATGAATATACCTTCCATGCTCTATGCAAGTGCCCGCTAGTAGTGCAG
CTCTAGGATTGTATGGATTTAGTTTGGCGTTTGCCCAAGCGTGCGGATTTGAAGAATTCA
GGCACTGAATGGTTGCTGGATACACTTCACCCTCTTTCTGTGTTAGAGAGAGGCATGCTA
GTGATGAGCTTATGGAGGGTGTGGCATAATCGGAATGAGGTTACTCACTAGAAAGAACCC
CCTCCAATGGAGGCATCTAAACGTTTTCTGATGAGATACCTGGATTCACTACTATCACTA
AATTATTCAGAGGAGGAACTGCGGAAGGGGAAGCAAGTGGTTGCTTATGGTCAGTTATCT
AGATCACGATTGGTTCCGCCTCCTACTCCAAACATTAAGTGGGTTTTGCCTACGGAGGGC
TGGGCTAAGCTCAACATCGATGGCTCTTGGACAGCCGATGGGCGAGCAGGTGCAGGTATG
GTTCCTCGTGATAGTACAGGTCAGATCATTTACACATCATGCATGGAGCTCTTTTTCTGT
AGAAATGCATTGGAAGCTGAATTAAGTTCATGTATCAAGGGTCTTTCGCTGGCTATTCAG
ATGACAAACCTACCTATTCAGGTAGAGATGGACTCACGGGAGGCTTTGAACATGATCATG
AGTGACTTAATTGACAGATCAATCATCTCCCTACGTAGCACTACTTTTAGTTATGTTCAT
CGTAGTCAAAATAATGTTAGTAATTTTTTGACAAAGTATGCTAGAATGAGGTGTAGAACA
ATTGGTTGGCTCAACTCTGGTTTATCAGAGATTATTGAACTTTGTAATGCAGACTGTAGT
ACCTCCACTTGAGTAATAGTGCAAAGTTTCACCAAAAAAAAAAGTTACTCTAAGATCGTA
AGCACATACGTACATTACTCGCGTGAGTGAATTGAGTGCGTCTAATTAAATTCCACATAG
TAGTTGGAAGTCCGGATAAACGGCATTGCGCTTGATTATTTGATTTGTTAATTTAATTCA
TCTCTGCAACTCGTGGGCTCATCAACTGTGATTTGATCTAGGCTCGCAAAGTCGCGCAAC
GCAAGGAAAAATGGGAAAGCGGAACAACGATGGAGATACACGACGCACGGGCGTCAGATT
ATTCGTGCATGGACAAGTGGCTGCTGGCTCACATCAGATGTCCGCGGCCGCGCCGTCGTC
CATCTCCTCGGCGCTCTTCCCGAGCAGCGGCACGAACTTGAGCATGACTTGGACGGCGTT
CTTGGCGGCGATGTCGATGAAGGTGCTGGCCTCGTTCCCGAGCGCGGAGCCTCCCCCGGC
GAGGTCGGAGAGCGAGCGGATGGTGAGGAACGGCACCCCCTGCGTGTGCGCCACGAGGGC
CACGGCAGCGCTCTCCATCTCCACGGGGGTGCACCCGAACTGCTTGCGGAGGAACTGGCG
GTACTCGGCGTTGTCCAGGAACACGTTGGCGCTGCAGCCCTTGCTGACTCGGGTGACCCG
CGGCGCGCGGGGCAGGCACGTCGTGGCGTTCACGCACGCCGGCAGCTCCATGCCCTCCAG
CTTCTTCGCCAGCGCGTAGTACCGCTTGCTAGCGGGCACCCAGAACGCGTGCTGCCGCAC
CTCCGGCTCGCCGGACTTGGGGAAGATCTCCTCCGGCTGGTACCAGATGCTGTTGAGGAG
GTTCGCTGATAGCGCCGGGTTGCTCTGTCCCACGGTGTAGTCCGAGAAGTTGAGGGCGCC
GTACTCCCGAGTGTAGTCGCCGGCGGCCTCCAGCGGTAGCTCGTTGTCCTTGCCGTCGCC
GAATCGCTGGCCCCCGAATCAATCATCCACACATCAAATCTTGGTCGACCATGACACACG
TGAAACGTGCAAAAATATTAGCGCTGATAAATCTGTACTACCTGCCAGTTCCAGAGGGAG
ACGTGGGCCCAGTACTCGGGGATGGTGACGTCGCCGATCTGGAGGTCCTCGTTGGCGTTG
CCAGCGATGCCCCAGTGGACGATGCCCTTCACCCGGAACAGGCTCAGCAGCATCTGGGTG
GTCAGACCAGCGTTGAGCTGCAACCATGGTGCAACAGTATGTTAAGTTCTGACTGTGTTT
TTCCCGGCAAAAAAAAAAAAGGAAGTTCTGACTGTATTTGTGATAAACATTGTCAGTCAG
ATATAATGGTATGTACCAACTTACCATGCTCAGTCCTGTCATGACCATGACGACGCTTTG
GCCTTCGATGGTTCCAAAGCGAAACCTTCGCCCTTCAAGCAAAAATCATTCAATAATGTT
AGTATTAATTATCAACGACGTTCATGCTGATTGCATTCGTTAATCTTTACGGTGTAGTTA
CGACCGACTTTTACTTCTACGTACGAGTATCATTTTTCACTTCGATCGTACGTACAAAAT
TTCACTGAGTTCGCAGATCTGTGCCTATCATGCATGTGCTTCCATCAATACGCACATCCC
ATGTGCTTTCATGCAAGTCGTCCATATATTAATAATCTCCGGTCCCGCGTTCCATCACCG
TGTGCTTTCATGCAAGTCGTCCGTTCTCAGGTCATGCATACACTTAACGTCTCAGTGTTT
CAGCTCGTCAGGTTACTGCTTTCGAGTACCATTCAAATTCAGCACAGTACATAGTTCGGC
CGGTTCTTATAAATGAGCAGGCTTGTTACTCAATTCAACCATATTCTTTCCGAATTTCTG
ACTCCGACAGTGATATTTATGAATAGGCTTGTTTCTTATTACGTTTATTTCTTTGACCCA
AACAAACCGTTGACATTTCAAGCTTAAGAAAACATCATCGATCACGTATTACCAACAGTG
TCATTTCATGTCAGATTATTTTTGCACATGACGTACGATGCTTGATCTGATTAGACTGAA
AACGTACCATTTGAGTAGAGTATTTACCTTGGATGTCCATGTTAGGGATGCTCTTGCTGG
CCACGAAGCTGGGCGACTCGAGCACAGGAACCATCTCGTAGGTGTTGGGCACGACGAGGC
CGACGAACGGCCCGGCGCGGTTCGCCCGGCGGATGGCTGCCCACGTCTTCTGAGTGATGT
ACCCCTCCGCCGCCGTGGCCATTAGCGTCACCGCCACGAGGACGACGGCCATGAGCTGCT
GCCGAACACCACCCATGGTCGAGCTAGCTCCGTTTCTCGATATGACGAGACTTGTTTTGT
GTGCTGTGCCTGATTGGAGTGTGAGCGTCCCTGTGCAGAGCTGGCGCACGTATATATAGC
AAGTTAGGTACAGCCAGGGGTTGGAGCTGTGGGGGAGTTGCTACGGAGTAAATCCAAGGA
ACGCGATCCGAATGATGCGGTGCACATTTTTTCACGTATATCTATAGCTAGTTGGTACTA
AAAATGTCAACTAACAAACCCTAAAAATTCCCAGATCCCGAAATTGGTTGGTGGAGATCG
ATAGCGTAGAGATGCTGGTGTGGTAAGGGACCATCGGATGAGTATATCATCCGTAGATAA
TAATACGACCTGCAAACACAACTCGCATCATATACACTCTCTCCTAGAGCATCTTAGAAC
ATGTACAGTTTAAGCGATTGGATAATCGCTTAGCAAAAGAGATCAGTTTCTTTTTTGTGA
GTCCCTTGATGAGACATCAATATTTTTAAGAGAAAGTATGTTTTTGTTTATCTCACAGGA
AAAAAAAGTATGTTTTTGGTCCATCAAGATTTTTTGATATACATTTGATCCTTCAAGGTA
TGTATTTTTGGTTAAGAGAAAGTATGTTTTTGGTTACCTCACAGAAAAAAAAAGTATGTA
TTTTTTGATATACATTTTTTAAGAATGAGAGTGTTCTCAGGCAGAACCCGTGATTCCGAT
ACAAGCTAGCTACCATGGCCGTGGGGCAGCATGGGGGCTAGGGTTGACGGCCGGGATGGA
GATGCGGCTGACATCGTTCTCGATGCATTGTGGTCGAAGGTGAAGCATTCTTGCCGGGGT
ATACACCCTGTCTGGCGTTGGCCAGACTGTCGGAGGCGATGTCCGTGGACATCGTCAGCT
TCTTGAAGTATTCGTCGTGGCTGCATCTTGACCTTCGTCGTGCTTCGAGTGAAAATCTAG
ATTCTTTGGATTGGACAGTGGCGGCACTCCGGTGCCGTAACATTTTTGAAGACACCGCCT
TGGCACTCTCGGTTCATTGGCCAGCAACTTCCCATCTTCGCTTCGTTGAGGGCTCCATCA
TCACCATAGTATTCCTTCTTGTTTATCTTTTGTCTTTGTGGTGGTGGATGGGGTTTTGTA
GTTGTTCTCTGGTACCTGTGTATCTTGCCTCGGGTGTGTGGGTTCTGTTGTGATGTTGTG
TGTTGTGTTCTTAGAGTTGTAAGTTGATCATGCTTTATCTACAAAGCGGGACGAAAGCCT
TTTTCGTCATACTAGCGGAGGCCTCTAAAAGCTCAAGTGCATAACAGACGACTAAAGCAT
GTTGATAAGGTCAAAAGAGGCTGGCGTAGACCGAACTTGACATATTTGTAAAGAGAGATC
TGAAGGAATGGAGTATCACCTGAAAGTGCAGTCATGTCCTTAATCGTGTTTTGGTGTTGC
TGACNNNNNNNNTATAGATAATTAATCACTAATCCCCTTTAAGCTATTGTGAATGATCAT
GTGTTGATAAGGACAAGCTCACGTGCTAACAAGGACAAGATCAAGAT