Contig Data
morexGenes
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Map Locations of contig_7343 (5050 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7343

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76906 1 566 bp AK355603 Available Available None
MLOC_76905 2 1425 bp AK374733 Available Available None





CDS Structure of MLOC_76906






CDS Structure of MLOC_76905






Contig Sequence (5050 bp)

>contig_7343 5050 assembly3_WGSMorex_rbca.fasta
GGTGGGAGCGGGAGCGGAGAGCCATCTTAGGCAAATCTTACCCCCTCAAATGGATGTCCC
GAAAGTTGTGTATTCCTAATACAACTGGTGATAGGTCACGTGCTTTATTTGGATGTTTAC
AATCTCTACTGGCAGCTTTTTCACTTACGTTTCAACGATATCTTACTGAAAACTGCTGAT
GAACAAAGGGTGGGTTATATCAGATGCTTCTCATCTTCATGTTTTGCGTGGCGCTGTATT
AATCGGTAATATTTGATCGACACACCAGTGACCCGAATTTGGTGTCATTTGGCTAGTATC
TGTTGAATGATGTCCTGGTTTAGGTCTCGAATAGAATCTACATTCTAACTGCTGCCTTAG
TTATATGGGTAATTGGATATGATACGTATGACGGGTGTCACATCCTTGGGTAATGTCCTG
TTGCTTCCAATTAAGATTCTAGAGGCTCATTTTGATGTTAATATTTGAAGTTGTTAACAA
CCGGCAGGTTTCTCGTGATGCCGAGACCGGGATCAGTCGAGGATGTGGTTTTGTTACGAT
GCGTTCGCTTGCAGAAGCTAGAACAGCCATCAATGCTCTCGATGGATTTGTGAGTCATAC
AATGGCTTCATTTTCTCTGTAGTTTCTTCTCAACTTGCACATTGTCTAGAAATGGAAGTG
CTCTTTGGAGTAATCCAATTACAAATCGCTTCTTTTACTTCCATATTTCTCTTATAGGAC
CTGGATGGCCGCGAGATGTTTGTAAAACTAGCGGCTCACGTCGTTGCTAGTAGAAGAAAT
CCCGGCGGCCTGTCCCATACACCACCCATGAAGGACCATATATTTGAAAGTCGATACAAG
ATCTATGTTGGCAACCTTGCATGGTCTGTTCAACCTCAACACTTGAGGGAACACTTTACT
AAGTGTGGAACTGTTGTTAGTACAAGACTGCTGACAGATCGCAAAGGAGGGAGAAGTCGT
GTATATGGATTCCTTTCGTTTTCTTCAGCCGAAGAGCTTGAGGCTGCTCTGCAGCTTAAC
AATACGGTACAATTCTTCAACTTCTATATTTTGCTACTTATTCCGTCATAGTTTGATATT
ATAATGGGAACCGCAAATCCTTGTTGAATTTATTTCAAGAAACTTCATATATGCATCTTC
TTCAGAATCTGCAGCTGGCATAAGTTTGTATAAGGAAGTCCTATATAAGTAACATGGGAT
TACATTTGTATCAGAAAGTTTCTGCATAACCTGAAGGCTGAAGCTTACCAGTAGCTCCAT
GATAAGCACCTCCATTTCATGTTTTTGCCGATTACACTCTGCTTCTGTATACATTTTCTG
TTTGTCACTCTCGTTGATATTGGAACTATGTTGACAACTATCATATCTTACCTCGACTCT
TACTTTTGCAACAGGAATTTCATGGACGGGATATCATTGTCAGAGAAGCTCATGTAAAAT
CGCCAGATACGCTAAGCCAAACCCTTGAGAGTTAGACATGAAAGCTACCGTATTTATTTT
TGTCTGGCTTATTTGCCAATTGAGTTCATTGTTCAGGCACAGTCTGCGCAAGCGCAACTA
AGTAGCTAACATCTTCTGTAAGTACGGAGTAATGGAGTGTGATGTACCATTGCAATTTTG
CCGGAACACAATCATTGACATGAATCGACTGACTGGGTTGAACCATCTGCCGGTAGTCTG
GAATCTTGTGAAGAGCATAATTCGACAATGAGATATTGACGATTCATTCTAGTCAGAATC
ATGAGATATTGACGATTCATTCTAGTCAGAATCAAGCGACTGAAATTCCGTCCACGATTG
TTTCCCACACGAGGATGCTTGCAAGGGGGTGTGCATTTGCTTGATGTTTGCAACGGGGTC
AATAGTTTTCTTTCAAAGAAAAAAGTACCATGATGGTCATGTTGCCAAGGGGGTATACAG
TTTTTCATGCCAAGATTTGAGAACTTTGGCAACATTGTTTGAAATAGGTGGCCATTCCGT
TTTGATCTAAAAACTTGGAAATGTTACGTTTTCTTCAGCTCTTCAGTTGACTTTTGCAGC
TTAACATGTTGAGGAATGAGGGCACCAATTTATAATTTGTTCATGTAACATAGTACAACC
GCATTGGCATGGCAACATCACAGCCAACCTAGACTGAAGGAAGTTAGCCTGCGAACACAT
TGCATCAGATATGACTCTGAACTAATCTCACCATTCAAAAAGGGATGATAAGTCCGCAAA
ACTTATGAAACCATTCATACTACAGGACTCTAGCATGTCAACCGTATCAACTCAAAATTC
TAGTTCGATGCCATACTATTTTGTGTGGCTGTGGTCAACATTCCATACTATTTTGTGTGG
ATGTGGTCAACATTCCTCTTCCAAAACACATACGTAAATGCTTAACTAGAGGCTTAGTTC
AGAGTACATCTAAACATCTGAGTAAGAGCAAAGCAAGCAAAACTATATGATCTTTAGCCA
AAGAGCAACATGAGCTATCTGAAAACACATAAGGTAACTGCTAACTGTAACTGACAAAAT
CTGGGTACATTATAACAGTCGTTTAACAGACAGAACAGTGAAACAACAAAGGTTTTACAG
CATCCTCCAGTCAAACATAGAAAACTTGCAGCATCGACTTGGCTCCAAACTCTCATAAAG
CGTTACATAAGAATGGTTTCTGGAACAATCAAGCTTTAATCAGCTAAGAGCACACCAGAT
GCATATCTCCCTTAGGCCACCAGAGTGCTGGCGGTGGTAGACTCGCTGCAGAGACGAAAC
AATTGTGTTAGCAAAACATTTGTTGTAGGAGGTAACACGATTGGCAACATACATTAGGAA
TACTAAAATAAGTCCAACGGAAATGCTTTGTGTACGACAAAAAGCAGTCTGATCTATGTA
CAAAATTCATCCAGGCAATACAACAAATGAAAGGACAGTCAATATAAACTGTCGTACCAT
TATCATTGAGCTGCCTTCGGTTCAACAACAATAATGTTTACATTACATAGATGCAATTTT
CATGTTTTAGTTAAACTGTGGTACCATTATCATTTGTATTTTAAAAAACTAAAATGCACC
CTCATAAACGGCAGATATTGCTCGGTACATCAGATAAACAATGATTTTCTCAACTCGGTA
ATCTTTGCTACAGTATTACTCCGTCGGTTCATAAATATAAGATGTTCTAGATTTTTTCCA
AACCAGATGTATATAGACACATTTTGGTGTGTATGTTCACTCATTTCAGTCCGTATGTAG
TCCATATTGAAATATCGAAAACATCTTATATTTGCGAACGGAGGGAGTAGATTCAAAATT
TAAATGCAATTTCATCATTATATATTTACTTCAGAATGACATGCTTCAACCAACAGAACA
GACCAACTGAGATATTAATTTAAATAAGATAAATGCAATTGTAGAAATGATGCAGTTTGA
AGAACACATTGTATGTGTCACCCAGACACCCATTGGCAGGATAGGGACGGACATGTCAGT
CTCATAATCAGTTGCATTTTTCCAAAACTGCAAACATTTCAGTTGGGTTGTTCTAATTTC
TCTTTAAAATAAGCATTGTGATCTTCATCAAATTCCTATTTCATATCCAAGCTACTCCCT
CCGTCCGGACGGAGGGAGTACAAAAGAAGGGTATACATTATCATGCTGGCAAATTGAAGT
TATTTAATAAGACACAAAATACATAGGTGTTTTACATTTATATCATAAAAACTATCCAAA
TTGGCTCTACCATGACTTCATAAAATCAATCTTTACAAGTCAAAGGGTGCAAACTGAAAC
AGCAGTGTTCACTACAGTGTCGGTACGGGAATGCCTTACAAGCACCAATTAGCAGCATAT
CCACCACAAACATAACTAAGCTTAACCACAGGCATAACTAAGTAGCTTAGGATCGCATTT
CTCTAAATTCTTTTCTCAGAAAGAACAGAACAGCCAACAGACTAGCATCTAAATAAAGGC
CGAGCGGCATGCATTGACGACACAATATCACATTTAAAAGACACATCTGAAGTACCTAAC
ACGTACCCCTACTCACCAAGCTATATGTAGCACACATTCTAACAACTCCTATGTAGAAAG
TGATGCGCATACAACAAACTGTTCACAGTACATTGCCTACTAACTTCATTAGGCTTCATA
ATTCACCGAGCTATATGAGAAGAAAGATTAATGGCACAATCACAACTGACTAGCTTCCGA
TCCCATTTCTCTATAATATCTATGTCCCAGAAGGCCAGAACAGACAACATATTAGCATCT
AAATACAGGGTCAAGTGGCATACATTTATAATACAATGTCACATTTACTTAGTACCTAAC
GCATACTCCCTACTCAACAAGCTATATGTAGCACACATTCTACAGCTCGTATGTAGCAGG
TGGCACACATACAACTAACTGTTCGCTGTACATTGCCTACTAAACTGATAAAACCTCACA
ATTCATCGAAAATATATCAGAAGAAAGATTAATGGCACTGGAAGTGAGTGACTTACTACT
TCCAGGTGGGTGGGAGCTTCTTGGTGCGCTTGTAGTAGCGAGCGAGGCGGTGGATCCTGC
TCTCCACAAGGATGAGTCTGAACTTAGAGTCCTTGTCCTTCCTGTTCCTCTCCAGGTGCT
TCCTTATCGCCACCGCCTTCTTGATCAGAAAGTAGAGGTCCTCCGGGATCTCTGGTGCCA
GCCCTGCGCACCAAAACTCACACAATCAATACACTCATCAACACGTGGAGCAATCTGAGA
AAGAAGAGGTGGGTATCTAATCTATCCTGACCATGGGCCTTGAGGATGCGAAGGATCTTG
CTCCCGGTGACGCTCTTGACGAGGGGGATGCCGTGCTGGTCACGGAGCAGGACGCCGATC
TGCGACGGCATCTGGCCCTTCTTCGCGGCCTTGGTGATTAACTCGTCCACCTGCACACGA
GCCCGACGCACGAATCAACAGCCATATCACATCGAACCGAGGGGAGCGAAGAGAAGGCGC
GGCTTCTTCTTACATCGGCGACGGCGGTCTTGACCCAGCTCGGTGGAGTCCTCTTGTACG
GCAGCGCCGA