morexGenes - Barley RNA-seq Database

Contig contig_72986
Source Contig contig_72986
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_72986 (6671 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
	No map location	No map location
Predicted Genes from contig_72986

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76805	2	2193 bp	MLOC_76805.1	Available	Available	LOC_Os11g32100.1, FRAME:+3, EVALUE:3e-170, 13111.m03120 protein inducer of CBF expression 1, putative, expressed
CDS Structure of MLOC_76805

Contig Sequence (6671 bp)

>contig_72986 6671 assembly3_WGSMorex_rbca.fasta
CTGAGTTAACAGGTTAGTCCCAAAAAGATATAAAANNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATACGTTGGAGATGTATCAGTCCCCT
ATTTATCCGTCAACGCAACTACACTCCTCATTTGCATTCTCATATGTCCGGTCACTTGCA
CGTGATTGGTGGAGAGGAAGAAAGGGAAAGAAAAGAATGAATGAAGAAAACGAAAAGGTG
GTCCGTGGTGGGGTTGCGTCCTACGTCGGGGACTGACCGGGCACACCTGGGCGCGTCCAC
GAGCCCTCACATCCTCCCTATATTTGAGATGAATATGAGGCTTCACGGACGGCCCGGGCG
TAGAGGGATGATATGAGGGGTCGGTTTGGCCACTTTTTTCCTTCTCTCTCCTATGCGGTC
ACTCACTAGGCGCGTATGAGGGGTCGTTCGAGGCGTCCGGCTGTAGATGCTCTAAGGGCA
TCTCAAGTCGGGCCCCCATGCCCCTTTTTAGACGTTGGCACTAAAAAATCCGCCCAGTCG
CGCCCCCAAGACGTATTTTTCACTGGTTGGGCCCATTTTTTGGGCCGGCGATCCATGGAC
AAACCGAGCGCGATGGGGGCAGTTGGGTGGTCCGTCGAAAGGAAAAGTGGCATGTAGGAC
ACCACTGTTAAGCAAGAAACGCCTTTCCCTCACCAGATTCGCCCTCGCGCGCCACAGGAT
GCCTCACCGCCATGCCGATCCCAGCGCTGCCCACCTGCCCACAGCCGCTGCCCCGCCGGT
AGAAAAGGCCATTTCCCTGCTTGTTTCACGGCAGCCTCTATCCCGCTCAGGAGGGGATAC
CAGCAGCTGCCCACCCACCACGCCCGCGAGGTGTTCGCGGATTTGCTTGCTCGACCATGG
ACTTAGACGATCAGGACACATTCGCGGCTCTAATGGAGGAGGAAGCCGAGGACAACATCA
CCGACGAAGAGCACCTCATGATCCCCGCCATGCTGGTTGGCTTGTTCGCGAACGATGCCA
AGCCGCGGCGAGGTGGCTCGGCATCGGACTGCTGCAAGAGCAAACAAAGGCATCGCATGG
AGGGCTATTACATGCTCTACGCCGACTACTTCGCCGACGCTTCTCTTCATGGGGAGAAAG
TATTTCGACGCCGTTATCGGATGGGCCGGAAGCTCCTCCTCAGGATTGTGAATGCCATCT
AGAAGCTCGACGACTATTTTATTTGTAAGAAGGATTGCACCGGTACGGTTGGATTCTACT
CACTCCAGAAGTGCACCACAACTATGAGGATCCTTGCGCATGGAGCTCCTGGTGATATAC
ATGAAGACTATAGGCGCATGGTCGAGTCCACCACCATTGAGTGTTTGTACAAGTTCTGTA
GGGCAGTGGTGGTAGTGTTTGGACCATAATATTTGCGATCACCCAGTGTTGAAGACACTG
CTCCGATCCTAGCACAGAATGCAACAAGAGGATTTCCTGGGATGCTTGGAAGCATCGACT
TCATGCATTGGGCATGAAAAAACTATCCATTTACTTGGCAGAGGATGTACAAAGGTGCCA
AAGGAGGTTGTTGTGTGGTACTTCAGACAGTGATCACACATGACCTATGGATTTGACACT
CCTTCTTTGGTATGCTAGGAACTCACAATGACATCAACGTATTGGAGTGCTCGAATGTCT
TTGCAAAGCTTGTTGAAGGTCATGCTCCTCCGATGAACTTCGAGGTCAATGGGTGCCACT
ACAACAAGGGATACTATCTAGCAGATGGTGTCTATCTCAGATGATCCATATTTGTGAAGA
CTATCTCAAACCATGTGTCGGGAGACAAGAAGTCACACTTTTCTAAGTGTAAGGAGGCCT
GCAGGAAGGATGTCGAGCGAGCATTTGGTTTGCTCCAATCTCGATCTGCTATTGTCCGGT
ACCCCGCTCTAACCTGGTCGAAATCTCAGATCTCGGAGGGGATGAATTGTTGTGTCATCT
TGCACANNNNNNNCATTGAGAGCGAGCAGGAAGAGCCAATGTTTGACATTAAACCATATT
TCTTGCAGGATCCTCTTGCAGTTGTTGATCATCATGTACCGGCAACATGGGCTGCCTTCC
TCAATATGCGCAAGGAGATCCGAGACCTAGAGGTGCATCAAGAACCGCAGGACGATCTGC
TGAAGCATCTATGGAGGCTCAAGGGCAACGCCTAGTCCTATTTGTTTTATTTTCTGTTCG
AATTATGAGCTTTCTTTGTTGAACTATTTGATTTGTATTGCTTTATGTGACGAACATTGC
CATAAAAAAATAGCGTGCCGAAAGTGAGCCGAGTTTGGGTCAAATTTGCGTCAAAATTGG
GTCGAAAGTGCCGGCTCGAGGTCGATCTTGGCGGGTCGACTAGGAACCCGAGCCCCCCAT
ATACTCCCTCCGGTCCTAAATATAAGACCTTTTAGAGATTGTTCTATAAACTACATACGA
ATGTACATAGACATATTTTAGATTATAGATTCACTCGTTTTGCTCCATATGTAGTCTTTT
AGTGAAATACCTAAAACATCTTATATTTTGAAACGGAGAGAGTAGAATTTAGTGCCGGTT
CGCCCCCAAACGGGGCTATTTCAGGCCTTTGGGGGTGGCGATGCTCTCACGCTCAAAAAG
ACAATTTTAGAGGAGTGGGCATTACGGTAATTTGACTTATCTCTCTCCTCGGTGGCCAGC
AGTTGTTTCCTTCCATATACATATACCCCACGATTCGCTGCCAGAAAGAGAACTGAGACT
CCCTGGGCTCTCATCTGCTCTCCTCTGTCCTTCTGCTCTGCCATCTCTGCGATTTTGCCG
CATGCCAGCTCCTCTTCCGGTCATAACCGCACCAAACACTCTCACACCGCGCCGCCATTT
CCGCGACCATGCTATCGCGGTTCAATAACTCGCTCTGGATGCAGGAAGGCGACGGCCATG
AACAACAGGGCCTCGGCCACGAGCTGCCGGCGGCGATGGGGATGATGCCGATGATGGGGC
AAGAGGCTGGGAACCACCACGACCCGCACCTCCTGTCTATGCCCACGGGGGGAGGCGGCG
GGTTCCGCGCCCCGTCGATGCTTGACGAGGACTGGTACTTCGGCGCGGGCGCGGTTGGCG
ATGCAGCCGCGAACGGGTCCATGGCCCTGGTGCCGGCTGCCATGGAAGCATCGGGGTCCA
GCTCCGGCTTCGGAGCCGGTCCACAGATGTTCCCGCTCCTCAACCTGGGCTGTACTGGAC
CGTTCGACGTCTCTGGGTTCGACCTCGGCAGCTCCGGCGCTGGAGGCGGCGACTTCACGG
CGTTCCTTGGCGCCGGCAACGCGTCCAACACATCGCCGGTTTCCCTGCTGCCGCACGGGA
GCACAGGGTTTCTCGGCTCGTTTGCAGGCTTCGGCACCGCACCGGCACAGATGACAGAGT
TTGGTGGCCTCGCCGGTTTCGACTTGTTCGACACCGGTGCCGGGGGCGGGGGCGGGAGCA
GCTCCTCCTCAGAGGGGCCGGCAGCTCCGGTGTCCTTGACCGCCCCTTTCTCCGGGCGCG
GCAAGGCGGCGGTGCTGCGGCCGCTGGAGATCTTCCCGCCGGTGGGCGCGCAGCCAACGC
TCTTCCAGAAGCGCGCGCTACGGCGTAATGCCGGCGAAGAAGACGACGACAAGAAGCGTA
AGGCAGCGGCGGCGGCGGAAGGAAGCGCCCTGTCCGCGGGGTGTGACACCATACTCGACG
ACGCCGATGAGGACATCGGCAGCATTGACGCGTCCGGGCTGAATTACGACTCGGAGGACG
GGAGGGGCGTGGAGGAGAGCGGCAGGAAGGACGGCAAGGAGTCGAACGCCAACAGCACGG
TGACCGGCGGCGCTGCGGCTGAAGGGAAGGGGAAGAAGAAGGGGATGCCGGCCAAGAATC
TCATGGCGGAGCGCCGTCGTCGGAAGAAGCTCAATGACCGTCTGTACATGCTCCGGTCCG
TCGTGCCCAAGATCAGCAAGGTGAGAAATTATTCGTGTGCACCTCAGCACCTTATCAGAG
TTTCGCGAAGCACACAAGGAAATACTGGTTGTTGCTTGTGTTTGGGTTGAGTAGGTTCAG
GCAATTTTGCTACTCTACATAACTTAATCTTGACAAATTTTGCTAGTACATAACTTAATC
TTGACAAATTTTGTGCACCAAGATGAGAAGCTCTACTACTAGTTTGTTTCAATGCGACTG
TTTGTCATAGTTGATCTGCGCATCTCAGATGCAATTCTACATGAAGATTGTGGATCAACA
CAGGCTTTGAAACGTTTGTGTCACTGTCATACACACTCCTTAGTCTGACAAGTTGTGTGG
TTTAGCATCTACAGGACCAGGTCTTCAATTTAATTTCACCTCATGTTACCTCATGCTATT
TGGTGTGACCATAATTCTCACTTTTTTTAGGATGACTATCATATATCTGATTGCTGAGGA
ATTAGATATTTTAGTTATTACTCGCTCCGTAAAGAAATACAAGAGCATTTAGATCACTAA
AGGAGTAGTTGCTACTAGGTATATGTATTCTACTTCCTGTAGGATTAAACTAGCGTTCCA
TTTTATATTATTTATTTCCAGGCATAGAATTATATTTCTGGGGGGAATTAAATTACTGTA
TTTCCTTGTTTTGATATACAAATTTCTATTTCTTGGATGAATTAAGTCAGCAGTTTTTTA
CTACAAACAAATTCCTTATTTTACTAAAGTAACCGCAGTCCCAGCTTTTTCTGTTTAGCT
TTACTGATGAAGACTATCTCTATTGGCATGGCCATAATATTACCTTGTTTTAGAAAATCT
ACTGAATTTATATTCCAGACAAAATGACCAGCGTGATTTCATTTCCTAGCTATCGAGTTA
TACGGATTAAACGCGGTTGCTGTCCATGAGTTGTTGTAATACAACCGATCTACAGTCATT
TTTGTCCTAGCTATTGCTACTTACCATTTCTGCTCTCTATGCCTGGCTAGCCTAGCGAAC
TGATGTATGCGGTTGCAATGGGCAGATGGATAGGGCTTCTATTCTGGGCGACGCGATCGA
GTACCTCAAGGAGCTCCTGCACAAGATCAGCGATCTTCAGAATGAGCTCGAGTCGTCTCC
TTCCATGCCCTCGCTGCCTCCGACGCCCACAAGCTTCCACCCTCTTACCCCGACGTTGCC
GGCGCTGCCGTCCCGCGTGAAGGAAGAGCTCTGCCCGAGCGCGCTGCCAAGCCCTACTGG
CCAGCAGCCAACCGTGAGCATCTATCTCTTGATCTCTCTGAATTTCACTCGAGAAATCCA
GACCATGGCATGACATGGCATTCTTTATTGTCCCCCTTGGCTTGCAAAAGGTTGAGGTTA
GGCTCCGGGAAGGCCAGGCCGTCAACATCCACATGCTGTGCCCTCGCAGGCCCGGGCTCG
TGCTTTCTGCCATGAAGGCGATCGAATCCCTTGGTCTTGATGTGCAGCAGGCCGTCATCA
GCTGCTTCAATGGGTTTGCCTTGGACGTCTTCAAGGCTGAGGTATGGTGTCGTACTCCAA
GTCTGTAGTCACCTTTTGGGAAAGAATGAAAAAAACTCAGCCTATATATTACTCACTCGG
TTTCTTCTTCTACTACTACTACTTGGCATCAGCAATGCAAGGATGGCCCTGGGCTTCAGC
CTGAGGAGATCAAGGCGGTTCTCTTGCAATCTGCGGGGTTCCATCCCACGATGTAGGAGG
GAGGGGCAACCAACCAAGTGCAGAGGATACTGCTGTATCTAAGGAATTTCTTTTTATAAC
AAGTAGCGGTGTGTTTTTCGAAAGAAGCTACCTACCTCACCTTGAGTAGTCTGAATTCGG
AACCAGTTTATCTGCGAGTCTTTAGAGTCCAAAATAATGTCAGCAATCTGTTATTAGCAC
TCTAGCATTGCTTATGCCTGATGTCACTACCCTGTGTCTCAATACATCGTGTGTAAGTCT
GATGGAGAGTTGTGTGGATCACCAATCAAACCGTACAACATCTGTTTTCGTGAGTTGTTA
GATGATGCGTCTTTTCGGTTCCTAGCGCGATGTTTTTTCTGGCATCTGTGTGGTTGCCGT
GGCTTGGATTTGGTTTGCAAAATCCAAACGGTGCTGTGCAGGACAGTTATTGGAAGCACA
GAGACAGAGAGAGCAAGCAAGCAAGCAAGGTGGTCCTTCTGCTGGACCCAACGACAACGG
TCTTCACTGCAGCCTGGCACTAGCAGGGCTGGATTTGGCTGGTTTCCAATCAAAGGTTAG
TACTCCGGTAAGAAAGAGGACCAACGGCCGGTATCTCGCCGTAAACAGTACTACGGGGAT
CCGCGCCAATTAATTTCTGAGGCATGGCAAAGACTGCCAATACAGTATACGTGAAATACA
TTGTTGGTGCCACTGCTGCAGATGCAGAGCTGCTCTGCTATCTGAAAGGGCACCACGAAA
GGGCAAAGTTAACAAAAAGGATCTCTCTGTAAGAACTTACGAAATGAACCTGAACGATAA
AAAATTCACCCGTCTGACCCTTTCATGTAGTGTGCGCCACACTACACTGTGTGACGCCTA
AGTCGTCGGCGCCATACGCCCCGGCCACCTGGCAGAGAGGGCCCATCCCCAGGCAGTGCG
ACGTCTAAGTCTCAGAAGTCGCACACTGTAAAGTGTGGCGCCGAAGGCTTAGGCGCCACA
CTGCCACTTAT