| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location | No map location |  |
Predicted Genes from contig_72869
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_76777 |
3 |
1543 bp |
None |
Available |
Available |
LOC_Os05g46610.1, FRAME:+1, EVALUE:2e-75, 13105.m04980 protein myb-like DNA-binding domain containing protein, putative, expressed |
CDS Structure of MLOC_76777
Contig Sequence (8177 bp)
>contig_72869 8177 assembly3_WGSMorex_rbca.fasta
CCCCTCATAGTGTCGGTCCGATCGCCGACGAGGTAGAGTAGGACATGGGACACTAGCCGG
CTCACGATAGTCGAGCTCCCGCCGTCTCACATGCCCTACTCTTCCTCCTGAGAGCCCGTC
CCCGGACGGTGCCAGTCGACGTGAGTTCGATGAAGGATCCTTTCTAGGAGGAGCTGCGTC
CACCACGACGCGATTGTGTCGACCGCACTGGTGCACCTTATGGGGCGCCGGAGAGTGTGG
CTCGGCCTCTTCAATATTCGTCGCCGCGAGGGCCTCCGCCGCATCCCTTGCACGCTGCCT
CGTCCGGCAGGCACGCTGCGCCATGCCATCGTCCGAGATCAGCCATGCTTCGTGCTCGAC
GCGCCAACGATGGGGTTGCACTTCCGCCACGGTGTTCGGACGCCAAACGGACCGCGCCGC
CTCATGTGATTCGGCAATGCCAGATCCAACCACTGGTTATGCGGATGCAATGAATTCCCG
ACGTTGTAAGTCCGAGCGCGGCCCTCGCGCGGCCGCCTCCCGGGAGCGGCGGAGCGCAGG
CAGGACGGCCATCTCCTCCTCAGGAGGAGCTCATCTTCGACGGATCTGGAAGTGAAGGAC
TCAAATCCGCTGCCCGTCATATGCCGGAGATGAGCTTGGGTGGCAGATTAGAGTGGAAGG
GAGTGAAGTGTCTAGGGATTGGTCCGTCGAGCGGATGAGTACGAATATATGTGGGATAGA
TGCGGGCCAGGCGGGTGTGCCCGTGCGCGCTTGGGCTCCCCATATACGCCTCATATTTGG
GCTGGAAATAAGAGGCGCCGCTAGTCTGGGCATTTGAGGGGCTCGTCTAGATCGAATTTT
TTTGACCAGACGGCCTGTCCGTTCGTTCGAAGAGGGTTTGAACGGTCCGACTATAGATGC
TCTAAGGTCTATTATTTTTTTGAGGGAAGAGGAGTGGATTTTTTGGAGGTCGTTTGAGAA
TTGAGAAGTTAAGGTTTTATTATTGTTTGAGAGAAGGGGGTCAAGTTTTGGGAGGTCGAT
CGAGAAGTTAAAGTTGGAGTTCAAGTTCAAGGGAAGGAGCTCCAATGTTATAGTACTAGC
CAGTGGGCCGTTCAATTTCTTTGAATTTTTCATGTAGGCCGTTGTGCCACACTGGACTCC
ACCCGTCGCTGTAGGTAGGTAGGAAAATTTGGCGTGCCGATGGTGCATGCACACCTCGCT
ATCTCGCTCTCTCCGGGTCCGGGCCGGGTGCAAGCTAGCTAGCGGAACGACTTTGCATTG
CATTGCATTGCATGCACGTAGCTTTCATGCCTCTCGTGCCGGGCAGAGAGGCACGCCATC
CATTCCTTCCGTCCACCCCTTCATCTCGCCACAATTATCCATGGACTCACGCGGCCTATT
ATCGTCCCACAAAATGAGGTGCTTAATTGCGCACATGCACGGCAGCATCAGCCCCCGCTC
GCTCTGAGCTGGTATGGTACGGCCAAACAACGCTGCGTGGCCTGTGCGTCCCCTACGTCG
CCCGGCACACGGACCGTGATCCATGAACTCGACACGGACGACGATGCGATCACGCGCGCG
CGGGGCCGTCGTGTCGTACCACGAGGAATGTGAGTGAGACCCTCGTCGCCATGCCCCGAC
ACACACCCGATGTGCTCGAATCATGGCGACGGCATGGTGGCGCGCGCTAGGCGACGACCT
CCTCTTTCCCACCCGGCAGCAGTTGGCCGCGCTGCTCGAGCACAGTGCTAGAGCAGTACT
GGAGTCCGCTCTCCGGCCCGGCCGCTGCCCCACGACCGATCCTGCGTAGCACGCCGTGGC
CCGGCAGAAAGAGACCCTGCCGGCCGGCCACGGGGAGTATCTATCTCCACGTTCGAGTAC
TGGTTTTTCAATTTCTCCCTGGTGCTAGTTTTCTACCGATTGATTGATTATTATAGCCAG
CATGGACGGATAGCAACGGCGATATGCCGGTATATGGCCTGGCCTGGCTGTGGCTGGAGC
TAGCACTGATTAATTGATTATTCGTCAACCGCCGGGCCGCTGCTTTGCGATTTTCCTCAC
CGCTTTCGTGAAGCACAAATCTGGAAAAAGCTAAAGCGTGACGGGGAGACAGCAACCTGC
ATGTGTGATTCAAGCAAGCCCCCATCCGCTAAATTATTGAGCAAAAAGTACGCCCGCCCG
GACACATCACTCGGTAGCATGCAAAGTAATACTCCAGTATGTATATAAATGTTTGTGCTT
ATTTTTTACAAGTGTTTGATTGCTATATGTCGTCTCCGTGACTAAGCAGCGCCTACACAA
CAATGTTCCACGACATACTTACCGTATTGTCGTCTCTGTGAAAAATCAAACAAGCGTGTG
TCTTTGTTTGTACTCTACGTACAATCCCTAATTGGCTTTCGGATGGATCCTTGCCATCCT
GTTGACGTGTGAATATACGTGGTTGGAAATCGTGATATGATTCAAGAAGGTGAAAAATGG
AGGGAAAAAAGAGGGGGGAATTTCAGAAGTATGGTTCCAATTCCAGGTTGAAATCGAAAC
TTGCGAGGAGGCTCTGTTCTTGGCAGGGCAGCGAAAGCTTCTGCTCCGCCGGTGAGTGCT
GCTGCTGCCTCTCCATCTCCGCGAAGGCCGGCTCCGCCTTGGCCCAGTGCGGCACCTCGC
CGTCCAGCACGCTGCCCACCTCGCCGCCGTAGTTCCAGTTGCTGCTGTTGCTCGAGCTCT
CCCCGTAGCCCAGGTTCTCCGACACGTCCAGCACGCAGCTGTAGTCCGCGGCGCCGAACC
CGGCGTCGTCGTCCGCGACCTCCTTCCCGCCGCAGAGCTGGCCATACAATGCCGCAGCGT
TCGCCACGCCGAGTTCCTCGGCGAACCCGGCGCCGTAGTCGACGCACAGCGGGAACGGGT
CGAACACCGCCGGCTGCTTCGGAACGAGGCTGCCGTCGATCTCCGGGCAAAGGGGCTTAC
GGTCTTCCTCTTCTGCGTCCGGCAATGCGGCCGCTGCCGTTGCCGTGTCCGCGGAGGCCA
TGGGCTTGTGCGTGGCCGGGTCGATGCCCTGCTGCCGGAGCTTCTTCTTGATGCAGCTGT
TCCAGAAGTTCTTGATCTCGTTGTCCGTCCGGCCCGGCAGGTGCGACGCGATCTGAGACC
ACCTGCACGCACGCACGCATCAGCATCCACTCTGCTCGAACGATCTCCACGCATTGCAAA
ACCGAACCGAGAAACCGCAACCGGAAACGGACGCATTGCGCCGTGAATTCGCAGGTGCAC
GGACCTGTTGCCGAGGATCTGGTGGAGCGCGACGATGTGGTCCTCCTCCTGCTGGGAGAA
GCAGCCGCGCTTGAGGTCGGGGCGGAGGTAGTTGATCCACCGGAGGCGGCAGCTCTTGCC
GCAGCGGTTCAGCGCGGCGAGCCTGGGGACGGAGCTCCAGCAGCCGACGCCGTGCCGGAT
GATGTGGTTGTAGAGCTTCTCGTCCTCCTCGGGCGACCACAGTCCCTTGCGGACCTTGGG
CTGCCCCACGGCGCCGGACGACGGGCGTCCCATTCGATCAGTTGATTCCGCTCCGGGATG
ATGAGCTGGGCTGGGCAAGCAGCGTGGATGGACGGAGGCAATGGCGGTCGGCGTGATGGA
CCGGCGGTTGCTTCCTCCCGGTGGATGGTCGGGTATATATGGGGGAAGCGTGGGTGAGAA
GAAGCGCAAGCTCACTCGGCGAGGGAGAGGGAGAGGGAGAGGGAGTGAGGTGAGGCAGCG
ATCAAGTAGGCTCGAAGCAATGCACAAGCAATGGATTGGAGTTGAAGACACCTGCGGTCT
GTGGCGCGCCGCGGGATATAATAGTGCGCGCGCTCTCGCGTAGGGAAGAGAGACACTGTG
TCAGAGAGATTACGTGTGTGTTTCTGGCCTGGAGTATCCGCACCGAGCTCAAATGCTGTT
GGTAAATATTAGTAAAATTAGTTTTTATAATGGTTACCCATCTTTTCTATAATCATTTAC
AATTAGTTTTTATTATGTTTTAATTTACCGTTCATCTCAACTCATTTGAGCTCTGGAGCA
GCAGAAGAACCTTTGTGTATTTTCTCTCTTGTTACGGGGTTGGTCGGGGACGTGACATTC
CTCCCCAAGAAGGAAGCCCTGCTTTCCTCTCCGAGAGCCCAACTCCAAACTTTACACTAA
GCGCGACACTGCTAATTAAGCGCCCAACGGTAGCCCATCAATGCGGCTGGGGACACTGCG
TGCTCTGCAATTAAGAATCGCGTCACGGCGGTACGCTGATAATGCGTCTCGATTAAGAAA
GGAGGACTCGCCATGGTTTCTCAGCTGAGAAGGAGAGATCACTGCTCATCAGGTCGTGCT
CGAACTTACCTGATCGTCAAATAATCACCGGCCGATTTTAACCTCGCCGATCACGTCGCC
GGAACCAACGGCCCGCCTGCCCGTGCCGACCTTCACGTTCCATCTGATGCGCGTGCATGG
GGGCCAACACAACGTCCCGTCCACTGTGCCGGTGCGCGTCCGGATACAGAGATCGACCGA
TCGATCGGACCTGATCAAATCGCAGCGATGCAAATGTGGTTAAAAAAACCCGGTCGCTGC
CGTCTGTCTGCCTGTTTTGTATGACTGACTGACTGACTGACAGCGGCTGGCCGGACCCGG
CCGGCCGGCGACCGGTGGCGCTCGTCGTTCCAGAAGAAATCAACGCCGCACTTGCGCTTG
TTACTGCTGTCGATGGACGGATCGTTTTCCTGTTTGCTTCGTGGAGGCAGTGACAGTGGC
GTCTAAAGTGATGGCCGGAAATCAGCGCCCGTTTGCAAAGCCAGAATAAAATCCACGGTA
TGTACGTACGTCGTCGTTGCAATGATCGATTGACTTGGCGATAACCACCGCGGAAGGAGG
AGTGTCGATGGCAGAGGTACGGCGCACGTTACCGCGAAGAAATTAAGAAAAGGGGCTGTA
CGTACGGAGGATGTCACCCTGGGGGTTCGGAAAATCTGCGGCGTCGACAACAGTGTTCAC
AAACGTGTGCAACTCCTTCCCACACACACAAATAAAAAGGACAAAAAAACGTGTTCAAAT
ACGGCCTTAGATTGCAGGCTAGTCGTCCATCGACCGTCGATAGTGGGTACAGCTCAACTC
GTTATGAGACCCACGATTACCGCGTAAATCGTGTCGATCAGCAGGTAACTTGCCGTCACC
TTAGCATGCTTAGCTGCTACAGAGAAAGCGTAGAGATGCAAATCGAACAAAGTGAAACCT
GAAACTTACACCTGAAAAGTGAAGATTACGCTATGCTTTGCTCTGGTTCGTGAAAACCAA
CTACCAATTAGCACTACCTCTCTACGCTAATGTGACACGTGCTGGACAGATGACGGGAGG
AACTACTTCGCATTGCCTGGAGATGAAGCTTCCACCAGCTGGAATGAGCGCTCAGTAGAC
ACTGGATCGGTCTATTGCTGTTTTCTTTTTCAGTTGGGGTCCTGTAATAAAAAAGCTGAA
TTATGGTGAACCTCTGGTGAGACTTCGTTTGGTCCTGGTTTTAGAGTAGTATATACTCTC
TCCGTCCTAAAAAATTTGTCTTAGGTTCTTGTCTTAGGTTCGTCTAAAAATAGTTGTATC
TAAAAAAATGTACGACAAGAATTTTAGGACGAAGTAGTATGTAAGTACTCCCTCCGTTCC
TAAATATAATTCATTTTAGAGATTTTATTAGGAGACTACATACAAAGCAATATAAATGAA
TCTACACTCTAAAATATGTCTATATGCATCCGTATATAGTTCATAGTTCAATCTCTAAAA
GGTCTTATATTTAGGAACGGAAGGAGTATGTTGCTGTGCTGATTCTATGTCTGCCTTGCT
GAACCTTGTCTATCTGTGCTTCATTAATAAAAATGGAGCAAGGGAAGATCAAGTAATACT
ACATCGACAAAGGTTTACTTAAAGATTTACGTACAAACTGATGTGGAGGATTATGATTGG
TAATAGAGAAATGAAGGGGTCCATCTCCACTGAAAATAAGGTAAGGAAGAAATAATTAGT
TTGGAAGGTTATGTAAACCTTTGTACTCCTCCTTTTCGGTTTATAGGGCTCATCTCAAAA
GTTTCTGATTTTCATTGTATAAAGCTCATTCTGAGTCCAGTTGAGTTAAAGTGATTTGAG
TCTCACGCCATATTTAATTCATAAAGATTAGAGAAAGTAAATTAGTGGCTATGCATGCAT
CATTTTTTACATCCATCATGCAAGTCCAACGAAAAGGTGGATGCTACATTTATTGCCATG
AAAATTGAATATGTGAGAAATATTGCATTGACTAGTTAAAACTAATAATTAACATTCACT
CACAATTCATCTTGATCGGGTTCAAAAAAAAAAACAATTCATCTTGATTGATGAGATTTT
AGATTTGAGCCCTATAAATAAAAAAGAAGGGAACAAGTCTTTATAGGTCAAGCATTATTG
AGGAAGACTCTTTTGAAGACTCCTTTTATTCGGAAAACTAATGTGACACGTCTGGCAGTT
GAACAAAGGGTGTAATTAATATGATGTGCAGCAGGACGGCAAGGTCGCCGGGGAGGACCC
GGCTGGGCATAGTATAGCAGCAGTGCACACCTAACAAAGCACAAGGCACCTGATCCTTGT
ACTTGAAGGGAAAAAAGGAGGTTTCTGTGTACACAACAGAGATGTTGCACGAGATGCCTA
GACCGACACATACAGTTGATAGAAAAAAAAAGGACGGGAAAAGGCATGCTCCGTTGCTTG
AGTCGCCCGTACGGCACCATATGCAAGACGTACCGCTTGCGTCAAATGTGGTCGGTTCTG
CAATCATCCGGCTCTCGGACTCTCCACGCACACAGTACAACAAAAAGAAATCAGTCCAAG
TTAAGACCGCCCGGCCGGCCACAGACACCTTTTTTTAAGCCTTCCAGCAGCAGCAGCATT
ATTGATTATTGTTAACCAGCAAGCACATGTTGTGCATTTTTGTTACGGTGGTCGTACCAC
GTTCATGCATATGCCCAGGCTTGCGTTGATTACCTTCAACCGTGCAATCAAATCCCTGAC
GAAAAACAAGCATGCATGCACATATATTCAGACTTTAGTCCCAACTTTGAAGCAAATCAC
GAGTTGCATGCTTGCGTTTGGGTGCTGGCATGGTACGCACGTACGTGCGTGTCAGTTAAT
GTGATGGTGGTCAGTTCTCTGTTTCTGCCAGGCCGGTTGGTGCGTCGGGACGGACAAACG
CACACACACGCGAATAAAAGTTGGGTGCACGACGTCGATGTACGCGCGGGTGCTACTCCT
ATGTGTGCTTAGTGACTCATCACTTGTGTGCAACCATAGTACCGGCCGCACCGATCGTTG
ATGGTGCCATACATGGGAAGAGATGGAGACGGAGAGTGTACGTACGTAGCTTGCGGAGTA
ATGTCCAATGATGGCGCTCTACTCTCGCAGGCAGCCACTCGGAGAGGTGACTTGCAAACG
CCACAACTTGCACGGCGGAGAGAAAGCTTTGCGTGCGTTGGAGAAAGCTCGCTCGATCGA
TCGATCGGCGACCACACGGGCCGGCCTACGTGTGTGCACGTCCGCCGGCCGGTCGCCGTC
GCCAGCGTTGCGTTGCATGCGGGCCATGCATGCCGGCGCCCCGTGCCCGATCGAGCCCGA
CGGACGGCTGGCCGGAGCTCCGTACGTACGTCGATCATCGACGCGCGTAGGTACGTGCGT
ACCGGTCGAGTCGATCGCTTCGGGCGTGGTGCAAGCAATGCTCCAACGGATTTGCACGTA
TGTACGTACGTACGTACGTAGCTGGCAGCTGTTGCTGCACTCTGCTGCATGGCTGGTGGC
CGTCTACGTGGAGACCGGTCCTTAGTGGGAGTACTACGCCGTTTACGTACGTAACGGCCG
TCCACGTACGTTTCTGGTCGTAGAATGAATCGGGAGGGGAAATAACTTGGTCTTTAATCT
GGAACAAGAAATAATTAAAGCCAGTCGCTCATGATTCTGGGAATGCTTGCTATCAGACCG
AGGGGTCTGTTTGACCGTGGATGTGATGACCTACGAAACACGAATAAGGCGACACTGATA
CGATGATACGAGATACGTCGATGCAAACTTTGACACAGATTCGGACGACTCTANNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNGTGCGGTAAGCTGGTGCAGTTTCAAACAAAG
CGTCGTAGCAGATTCTA
