morexGenes - Barley RNA-seq Database

Contig contig_72798
Source Contig contig_72798
Contig Data
|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|
morexGenes
Links
Map Locations of contig_72798 (7549 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
Predicted Genes from contig_72798

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76765	1	3911 bp	MLOC_76765.1	Available	Available	LOC_Os03g06390.1, FRAME:-1, EVALUE:1e-37, 13103.m00700 protein expressed protein
MLOC_76764	1	226 bp	None	Available	Available	None
CDS Structure of MLOC_76765

CDS Structure of MLOC_76764

Contig Sequence (7549 bp)

>contig_72798 7549 assembly3_WGSMorex_rbca.fasta
TAGATACAATGGAGACGTATCAGAAACCAGAGAAGCCAATGAACAACACACCTCAGGTTG
ACATGGATCTAATCCGTCCTCCTCTCGTGCATGACAATCATGGGGGAGATGATGACGTTG
CAGATAATGGAGATGCAACTGACCGAGGCAGTACAAGTCAAAGTGACGGGCAGCCATCAA
GTGATGATGATGATGATGATGATGATGTTGATAATGATGAAACCAATGGAAATCCACCTC
ATTCACCACCAGTGCAGTAGCAAAGAAGAAGTGAAAGAGGTCGCTTCCTTATTCTAAGTA
TCCAGCGCATCAATATGTGTTGATGACCGATGCACGTGAGCCCTCATGCTATGAGGTGGC
AATGTCTGATGAGAATAAGGCAGAATGGTAAGAAGCCGTGCAGGATGAGATGAAATCCTT
GTATGAGAATGATACTATTGAGTTAATGAATCTGTCAAAGGGGAAGAAAGCACTCAAGAA
CAAGTGGGTGTACAGAGTGAAGACTCAAGAAAATACCTCACATCCAAGGTACAAGGCCAA
ATTAGTTGTGAAAGGATTCAGCCAGAAAAGGGGCATCGATTATGATGAGATATTCTCTCT
AGTGGTCAAGATGACTTTGATCCGAGTTTTGCTTGGTGTGGCTATCACCATGGACTTGGA
AATTGAACAACTTGATGTGAAGTCTGCATTCTTTCATGGTGACTTAGAGGAGGAGACATA
CATGGAGCAGCCAGAAGGATTCGTGGTTGCAGGAAAGGAGCACTTAGTTTGCAAACTGAA
TAAAAACATGTATGGCTTGAAGCAAGCTCCTTGGTAATGCTACAAGAAGTTTGAGTCTTT
TATGGCTGGGCTTGGTTATTATAAAGCACAACCTCATCATTGTGTCTTTATGAAGAGGTA
CACCGAGGGTGGCTTCATTATTCTCTTGTTATATGTTGATGATATGATGATTGTTGGAAA
CAACGCAAAGCGGATTGTTCTCCTCGAGAAGGCATTGAGTAAATCATTTCTCGTGAAAGA
TTTAGGACCAGCTAAGCAAATATATGGAATGAAGATCTCCCGTGACAGATCAAAGAAGCT
GATTTGGCTCTCATAGGAAAGGTACATTGAGAAGGTACTTGAAAGGTTCAATATGAAATA
TGAAAAATATGTTATCTCTCCACTTGCAGGCCATCACAAAATTGAATTCAAAACAATGTC
CTTCAATCAAGAAGGAGAAAGAAGAAATGAGAAAAATACCTTACCAATTTGATGTGGACA
GTTTGATGTATGCCATGGTATGCACTAGACCCGATGTTGCCTATGTAGTTGGAGTTGTTA
GCCGGTTCATGACAAATCGATGTAAATCTCACTGGTAAGTAGTGAAGTGGATTCTCACGT
ATCTAAAGGGAACTTCTACATCTTGTTTATGCTTTGGAAGGAGTGATCTTGTATTGCAGG
GCTATACAGATGTAGATTATACAAGTGACAATGGTCGTAGGAAGTCCACATCTGGACATC
TGAGGACATATGCAGGGGGGCAGTGTCATGACCATCTAGATTGCAGAAACGTTTTTCTGC
ATCAACTACATAAGTTGAGTACATAACAACAGTTGATGCTGGCAAGGAAATTTTGTGGAT
GAAGAACTTCTTGCACGAGCTTGGCATGAAGCAAGAGAAGTATGTTATGTTTTCTGATAG
TCAAAGTGTTATCCACCTTGCCAAGAATTCAAGCTATCACTCTCGAACCAAGCACATTGA
TGTGACGTATCATTGGATTCGAGATGTTGTATATTCCAAGTTGCTGAAACTCGAGAAGAT
CCATACCGACGATAATGGTTCGGATATGATGACCAAGATATTGTCAAATGAGAAGCTACA
AGCATGTTGCAAGGTAGCAGGCATGACTGTACCCCTCTCATGAGTCAGAGAGGGAGATTT
TTTGGGATATCCTACTCATGTGGGCTATGAGGAGATGACCATTTGAAGCATTTCATGCAG
CCCAAAGATGTGTAGAAGCCCACGACCCATTAGGGTTATGACCTAGGGTCATTTTGTTCT
TTACACGTGAGTGGATGGGGATGCTTTACCCACCATCTAGCAGCCACCACCTAGTGTCAC
GCAAATTAGTTCAGCCTCCATTGGAGAAGAAGAGAGAAACCCAAATGAGAAATGGAAGAA
GAGAAAGATTGAAGGAAGAAGCAAAGGGAGCTCCTCCCCAAGGTTGTGATGGTCCAGATA
CACTACCTTGTCTCTTTCAATCTGCGGTTCTACCATCTTTGGTGAGATTGTTCAATCCCT
AGCTTTTGAGCCCCAAATCTTGTTGTGTTCATCCAAGATTCCGAAATCTTGATGTATCAG
ATGCTCTAGTGCTATCTAGAGAAGAAACTTGTTGTAGCTCACATTTGATAGTAGTGGAAG
AGAATTTTGGTGGATCCGTCCTGTGATTTTTTCCCTCAAGTTGAGGGGTTTTCCACGTAA
AAATCTGGTGTCTCTTTGTTGATGCTTGCTGCTGTCCAGAAAGTTACTCCTATCACAAGA
CACTTGTCTGAGGAGCGTATTGTGTGCTGAGTAACAGTTTTCCTCCATATATGTTGTTGC
ATACGTTTCCTTCTGTGCCAAGCAATGATCCTTGACTTAGTACATGATATGGTGCTGAGA
TTACTTTGTTTCACTGTAATTTTCTGTTAACCACAAGTGCATTTGTGTGTTAATTCGAAC
AGGAGGAGAAGGGTGATCTCCATGGTCATGCCCCCTCCTCGCGCGCGATAGCCACTGCCA
CGAGCTTGACCGTGACCTTTGTAGGTCGCATTGCCTAATGTTTAGAATACACCATTTGAC
CCATCACCTAGCATCTCCGTCCTCTCATAGAAGGCAGTATTTGCACGAAGAAGTCATCAA
CGGTGATGGAATTGTTTATGACGTCGACTGCTGCATCTACGGGGTCGTAGTCGCGATCAA
GCCCTTGAGGATGTAGTCCACTATATTTGGATCAGACAGCGGACGACCAACAACAACTAA
CTCATCCCCATGGCTCTTCATCTTGACGATGTACGTTGTGTTGGGCATGGAAGCCTTGGT
GTTAGCGATGACGATTCGATGACTACACGCCATAGATCTAACAAAATTACCGATCAATTG
GATTTGGTGCTACAGCTAGGAGCTTGGCATGGAGAGAGAGAACAACAGGAAGTTGAGATT
ACGTGGACTTTTACGTGATGTGGAGAACAATCATATCGTCTAACAGATAGCAGTGCCTTT
GTAAAATGTTGAGATCGTTCGTATAAGACCGTCTACAGCCGGACCCTCAAATCCTCCTCA
AGCGCCTGGGCACGCAGCCCGGTCACAAAAAATCGTCCCACACGGGCCTCTCAAACTGGC
CTCAAACGCCCGTGCTGACCGGCACCCTCCATTTCCAAACAAATATGGGGCGGATATGGG
GCAGCCTGGGCGCGCAAAGGGCACGGCTGCCTCGCCCACACTAGCCTGCATCGACCCCAC
ATATATTCGTCCTCATCTGTTGGTTGGACCAAACCCTAGCCACTTCACTCCACTCCTCTC
CACTCCCATCCGCCACCCAAGCTCACCTCCAACGATCTCAGGCCTTCTCTGGCATGGCCT
CTAGCGGATCTGACTCCGACCAGTCCGGATCCGTCGACTGGGGGTTGTCCCGTGCAGAGT
GGAGGAGGCAATGGCGGTCCACATTGCATTCTTTTGCACGCACAAGGATAGCGCCCTACC
AACGGGAGGATATGTCCGCCGTGACCCCATAGTGTCCGCTCAAAGGGCGCTTGGTTCCTC
TCGGGCGGGATCGTTCACGTCCCGGCGTGCGGATCCATCAACCAAACCCGTGGACTTCGA
GTCACGGGCTTCCCACCGTGGGAAGATCGTCAAGGCCTATCTCACAGAGGAAATAGCGGA
GGGGGAGGCGGCTGATGCGGCGGCACGAGCAACAGCACAGGATGAAGCCATCCACGCCCA
CATTTTCAAGAAACGGTAGTGGTAGAACATGCGCGTCCTCGCACGCGAATAGAATCGGGC
GGTCCGTGAAATGGTCGGCCTACCACCTAAGGAGGAGAAGGAGGTGAGCGGTGGCGAGGA
CAACTCCGGCGATGAGCAAATCTGACTTGATCCGCACTGTGTCTTCGACCGGTACTTCCG
CGGCAAGGACAGCAAGGACACCCAGAAGGGCAAGGGCAGCTGTAGATGGTCTCCACCATA
GCCAAACATGCCAATTTTTGGTAGTCTGATGGCATGTTTAGAAGTGACAGAGTAGACGGA
CGACGTGTGTGCATTTACATAGTAGTTGCATGGGTTGTATGAATTTGAGATATCAGATTT
GAGGTGTCCGGATGTAGAGGTGCGTCCGCGGGTGTTTGAGGAGCCGGATTTGGGACGTCC
GGCTGTAGATGCTCTAAGTTTGGCACATGCATAATTATCGACGAACAAAGTTGTGGGTAG
AGAGTAAGAGCATCTACAGTCGAATACATCAAATTATTGTTTCCACAACCGGATACTTCA
ATTCTGAATCCTCAAAAGCATACATTACATGCACGCGAAACCTAATCTGAAGCAGAGCCT
ATCTGACTCCTCTGTTGCCCACGTCTGACGACTGGTTGTACCCTCCCAAGTGTTGGTGCG
GTCGCCGACGAGGTATAGTAGGACAAGGTGCATGCACCGGCTCATGGGACTCAACACGTA
GTCATCTCCCATGTCCTACTCTTCCTCAATGGAGCATCTTGCCTTCATGTCAGTGGCCGA
AGTGAGGTCAATGATGGATCCATAGTGGTCGGAGGCCGACACGTCCAGCACTACACATTT
GTAGTGTTCGGGGTTGCCGGCCACCCGTATCAACGTTGGAGAGTGTGATTCCGCCTTGCA
GACATTTATCGCGTGGGTTGTCACGGCCTCCCGCGCCCTCGATCTCCGACGTGGACGGGC
CCCAGAAGGCCTCGTCGGCGGTGCGCCAACGAAGGGTTTGCGCCTCTACCAGGCAGAGTG
CACTGCCATCGATGAGGCACCGAAGATGTGCCTCGTGGCGGATCAAAGCGTCATTTGGAC
GGTGCTATGGATTCCCATCAGATCGACTCCGACAGTTATCGGGCGTTCTCCTCGCGGGCG
CAGTGGAGTGTAATGCGGACGGCCATCTCCTCATGTGGCCGATTGGGATGAGGTCCGAGT
TCGCAGATCGGCTGACAGAGGAATCAGATCCACTTCCCGTCATGCTGGAGAACGTAGGTG
ATCGCCGAAAGTGAGCTTGGGGCGGAGCGGAGGAAAGTGAAATGGAGTGGAGTGGGATAG
CTATGATTTAGTCCACAAAAAGGATGGGGACGAATATTGTGAAGTTGGGATGGGCCAATG
TGGGTCGGACCCGACATGACGGGCGTGTCTTGGCGCATCCGTGCCTCCCATATTTATCTT
AAATTTGGGCTAAATATGAAAGGTGTCGATAAGCCTGTGGGTTTAGGACCGATATGTGGA
GTTTGGCTGAGTCCGTTTTTATTTATTAACCGGTTAATGATCGGACCGTCTTCCCGGATG
TTTGAGACAACTATGAGCATCCGGTTATACATGCTCTAAAGCAACGTACACTTGGTTGCA
AACCTAAGGCGAATGCAAGAGGTTAGATTTGATGTGAAATGCTGCATAATTCCTATTTGC
AATTGAACTTCACGAGAGAAAAAATAGTTCCGATAAAACATTTTCTCACAGTTTCATCTG
CATTCACATTTCATTCCAAGGACCAAAGAGTTTGTACAAACTTTGCAATGACTGTCCTTG
AGCAGGCTAGGAAGGTTGCTTATTGAACAGTTCTCTTCCCCAAATCAGGAAGGAGCAGAA
CACAAAGCGCCCATCTTTATGGAAAAAGAAGAAACAAATGGCAAGAAGTAACCAGAATAC
TCAAGACTAGATGAGCAATTATGGAGCTCACGCTCGCTCACTAGTACCCCACCGGTTCTA
TTGCACGACCACGAGCTTCCCACCAATCTCCCCCGCTGCTCCATTGCCGCACCTCCAAGC
CCCGTCGCCGCCTTCGCCGCGTCCCTTGGGCACCGTCACGATAAGCTGCCCGTCGACGTA
CCCGGCCATAGCCAGCTCCGGGCAACAATCTTCAGGCAGCCGGTACCTCCACCTGTCAAG
CTCCATGTCGTCGCCGTCCTCGCCGCCGTCTCCGGTCCCAGCGTGCACCACCACCACCTT
GACGACCCCGGGGTAAATCCTCACGAGCCGCGCCCTCACCTCGCCCATGGCGCCGCAGGC
CGCGAAGAAGTGGAGCGCAGTGGTGCCCTCGAACGCCCTGACGTCGGCGTCCGCGGGGAG
CGGCAGCTCGAGCACCTTGCTGTACACGTGCGGCAGCCGGCGGAGGACCTTCTTGGGGCC
GTCGCCGTGGGTCGTCGTCGACTGGTGCATCCCCATGCGGTACGATCGCAGATGATGGTC
CTCTGACAAGCACCGAATCCTTGGGTCTCTCTCACCTTTGTCCCTCCCTTCCGGTTCCTC
TGTCGACGCGTATGCCTTCCTTGCCGCCGGACGACGCGATTTATAGGTGCGCTGGGATGC
TAAAGGCCAAAGGACGGCGGTGTCGCAGGGTTCTTGAGTGGCGTGGGGGAAAGATAAGCC
CGGGGATCGACGAGGAAGGTGGCGGGAGGAGTCAGATAGAGAGAGAGATCGGGGACGGCG
ATAGGATGAAGAAGAGCAGTGTTGGTGCGCGTGTCCGCGCGCCTGCGACGGCAGTGAGTT
TGGTCTGCCTGGTGTGCTGCGACGTGGCATGGCCGCTGTGGTGTGGGGTCCGGTGGCATC
TCGAAGATAAGGCCGGTGTTAGCGCTTCGCCATGGATACCCAAACATGGGGCCGCTCCAA
CGGTTTCAGGGGTTGTGGCATTCTTTGATTCTAGGAATTTTATGAGGTGTCTTTGTTAAA
GGATCGGAATTATATATGGGTTTTTTTGTATGTGGCTCTTTGCAACACAGGAATGAGAAT
ATGAGATGCTTTGGATCGCAATATCCAGAGGTGTCATGGAGGAATTCTGACATGAACATA
CATATATGGGTAATTATTATTTCCAAAAAATATATATGGATAATTTCTCTCTTGCATTGA
TGATCTTTCTTTTAAATTGCTAGAGCATCCATATGCAGCGTCCAAATAGACATTTTTGCA
AAGTCATGTGTTTCATTTGATTTCTAGAAATTTAAAAAGTTTGTGGTACAACTTTAGGTA
TTCCAGGTGTGAGGACCTAACATATCAAATCATTAATACAAAATTCGGAAATGAAATTCA
CTCAAATCATCATGATAAAATAGGTTAGATGAAAGATATGTTGTTGTTCTTACACAATTG
ACGTCCTTGTTTCTTCTTTGCACCTCATGAAATCCGGTGTCGCCATGGCATCTTCCTTCA
CAACTCTACCTCCTTCTCGATGCCGGCTCTACACATCTTCCATGCGCCGCATCATCCTCC
CAACACTCCTCCTTTGGTTGTCCACAATCACCACCGCCCACCCCCCCCCCCCCCCCCCCC
CCTCTCCGCCCCCCACACCCCCACGCGCGTCCCTGCCCTCCCTCGCTCC