| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
| No map location |  |
No map location |
Predicted Genes from contig_72365
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_76680 |
5 |
2382 bp |
None |
Available |
Available |
LOC_Os02g56110.2, FRAME:+2, EVALUE:4e-59, 13102.m06443 protein AP-1 complex subunit gamma-1, putative, expressed |
CDS Structure of MLOC_76680
Contig Sequence (4520 bp)
>contig_72365 4520 assembly3_WGSMorex_rbca.fasta
CCAGCTGGTGGTGCGCCATTAGTAATAATGGCGCACCAGCTGGTGGTGCGCCATTAGTAG
TTTTGCAAACCCTCGTCCAATCCGCCGAATCCCGCGACCTAGGTAGTCATCCGCCCTAGT
TCTTCCCCTCTGCAGCCGCCCCTGTCGCCGTGCCGTCCAGCCCCTCCTCCGGACCCGCAG
CCACCCTACCCTCCCTCCGCAGCCAGGGTGTCCCGGCGTCGCCCTCGCCCTGACTCCCCT
CCGGCCGGCCCCGGCGACCGGACGAGGAAGCCCGGCAGCGCCGCCAGCGGAGGGTTCATT
GTCGTCGCCCCTACCCGGAGCAGAGAGCGAAGAGCGAAGAGAGGAGGGACCGCTCGCTCG
CTCGTCGCCTCATCGTTGGTGGTGGTGGCTCCGCCTTCCCTCTCCCTCCGCGTCGCCCAG
GTCGAGCTCCTCCTCCTCCCCTATCCCTCCATCCCTCATTCCCGAGCATGTATGCCGTCG
TCTCTAGGTCTCGGCCGCCTGGCGTGCTCCGGAACATGTAGGATTTCCTAGGGGCCTTCC
GGGGAGCCGGTTCGATTTCGCTCCTACGTCCCCTGCCGCGGTCCCAGCGGCGTCGTCCCG
TCGTGACCCGGCCCGTGTTCCCCGGCTCGGGTTTCTGGACGGGATTGTTGGGTCTGGCTG
GGTCGCCGTGAGTTCCGCTAGCCCTGCTAGGGTTTCTCCCGTGGGAGTTTTGACCCGCAT
TCTGCGCCGTGGAGCGCCTGGAGCAAAGTCCCTTTCCTTCTGTGCGGATTGCAGGTGGTT
TCCTCGCCGGGTTTGGTTTTTTCCTGTCCTGTTCACGAGTTTTACAGCAACTCTGGGTGT
CGGCGGCGACTTCATCCTATTCCTTTCCTGTTCGTCGTGTCGGCTGCCAAGTCCCGTGAC
ACTTCCTGCCGTCTTACAGTTTCACTTGCTTGCGTATGTATACCTAGTGCCGTGGTGCGT
GTATTAAGCTAGTGAGTCACTTTTGTCTGCAAGAATCTGCAAGGAATGTTACTGAAGTCG
TTCTTGTTGTACGAATTTCCATTCATCTCTTGTTAGGTTCACGGGGTGGGGAATATGTTC
GGTCCTGGAGCGATTAAACAACGTCAATGTGCGTTTACATTACTAGATAGATGCCCCCTG
TTTGTTGGGTGACAGATGAGTTCGTTTGTTTATTTTAGCTGTAATTGCCAATGGATTTGG
CACATCGGTGTTGTTATTACTTCTTTTCCTTCATTCATAGTGACATTTTCATGCCTTAAA
TCGATCCGATTACTCACATGGGTGATGCGCTCTCTCCGCAATTGTCGCTGTATTGCTCAG
TTAGGTAGGACTTATCATTTGACAATGATGTTATATGACGTACAGGTGTTAGCTGATAAA
ATAGAAGGGGAAAGGCGCTACCATGGGCATTTCATCCAAGTGGATCAAATCACTTGTTGC
GATAAAAAAGCATGGAAAAGATCAGACTGGTGAAAGCAGCAGAGAAGTAAGTCAAAGGGC
GGCATTCGCAGTTTTCTTTCGAGCCAGCTTCCCCCCTTTCCTTTACTCGGCCTCAACGCG
CTAGTAGGAAACCAACTGCTCATTATCGACCTCGAAAGATGAACTATGGGACACAAACAT
ACTACCAGTTGATCCCAACATCTTATAAGTTGATAACCACAGCTAGGGAAATAACCAACT
CCTGGAAAAGACATGAAATCAAAGCGGTAGCCTCATTATCCAGCAACCCCGTAAAAAAGG
ACATATTCTCTATGGTTGGATATTGTGATGGTGAATGGTTTGTGTCTATTTGCTCATGTT
GTTTCCTGCTTGTTCCTTTGTGAGCATTAAAAAATATATTTCAATTGGATTTGACTTGTC
CTGTCCAAACGCGAGGTGCTGGCCAACTACCCGGAGGGCACCACCGCGCTGCGGGAGCTC
ATCCAGAACACCGATGACACAGGGGCCTCGCGGGTCCTCCTCTGCCTTGACCGCCGCGCC
CACGGCTCCTACTCGCTGCTCGGCCCGGCGCTCGCGCAATGGCAGGGCCCCGCCCTGCTC
GCCCACAATGACGCCGCCTTCACCGACAACGACTTCGCCAGCATCTCCCGCATCGGCGGC
AGCAAGAAGGCCTCCTAGGCATGGAAGACCGGCCGCTTCGGGTATGTTCTCTACCTACGC
TATCCTATTTAACTTTTACAAAATTTTCATTGCAGAACTGCATCGAAGGTCTGGTCATCC
TTACAAAATATTTCATTGCAGAACTGCATCGAAGGTATGGTCCGGATACATAGAGATGTC
TCCAATAGTTCATATGCTCCTGAGTATGATGTTGCTGGCATTTTGGATCCTTTCTTGCAT
ATTCGAGTTCTTAAACTTATGCATATCTTGGGTCAAGGCGACGCAGATTGCAGTGACTAT
ATGAATGACATTCTTGCTCAGGTGATTGCTTAATAAGTTAGTGTATGTCTTTGTTTCCGC
ATGCACATGCACAATGCTGTCACTTATTGTTGTCCGTGCAAAGTATGATGATTTGGTCAA
TTCCTCTTGCCCAAGTTATTTATTAATTCAAGTTTTATATGGTTTCTTAATCTGTATTGA
CAATGGTTAACCATTTATACTGTTTAAGAGGATATACAACATCAGTAAGTTAAGTGATCT
TACGGAACCATTTTACAATGTGGGAAAACATATATTTTAACTGTGCAAATCACAAAAGTG
GAAAGCATCAGATAAAAATATCTGCTTGAAAGTGCAACAAATCATGACAATTGGCAAAGC
CTCGAGAGAGTAAGTAAGAGCACCAGATTGAGGAAAGAAACTGGACAGGCGTAGAACATA
TAGTCATGAACTTCTAGATTCGAGCAACTTAGCAGCCCGAGATGAAAGGAAAACCTTGAT
GAATTTTATTGTTACATCACACAAGCAATTGAACCCATCAATTCGAAACACAATGGGAGC
ACGTAATACATGGCTCAAGAACCAAGCTAAAAATCTCACAGCAAATCTGCAGTGTATTCT
GACATATCTCTTGTTGACCTTCTTCCAATCAAGGGATATGCTTATAATATTTTATTTATT
GTTGACAATATAAGGTTATTTTTCTATTTATTTTCATCTTGATTGCTCTGTTTTTTTTAA
TACTTACATCAATACAAATGTTCATCCATCTGCTCTATTTGGGGTAAATTTCACTGTTAA
TCTATTTTTTTTCTTTCAGATATGTTGCTCTGAACATACTTATGACGGCATTATAGTAGA
TACACAAGCAGTACAGAGGCACAGGGTGTCAATATTGGAGTGTGTAAAGGTAACAATAAG
TATAAATCTGTCCGATATGCTGAGTATTCGTCTTCTACTGGGTTTGGGGACCAATGTATG
TTCAGTATCAGAATAAGGATTCTTGGTAATTCCTCACCCTCCGGAGGCCCACACTTGTGA
AAAAATCAATATTTTAGTACAGTCCACCCAGAAAAAAGAGAAAATCAGTTTTAACGTTAC
TTTATCTTCTTTAATGTCTGTATTTCTTTCATCATCTCTCTCCCCCCTCTGAATTTTGTG
GAATCAAAACATGTCCCCATACAAGAATTGCCAGAAATGCGGGGTTTATTCCTTATCTTC
GAGTGTGGTTGTGTTGTAAATAACTTTCCCCAATGCTTGGCATATTTAGTCTAACATCTT
ATCAGGAATCTCATATTTCCCTGCTCCCTTGGAATAGATAGTTTGCTACTTGCTAAAGGT
TGATTCATATTGTCTAGGCCTCTGCTGGCATAGTCATGTTTGGATACTGCTGCTCTTTCA
CAACAATATTTAATTCAAGGTTTTAGACTTTACTCATATATAAGTAACTCTAACCTTGTT
GTATAGTAATCCAGTGTTGTAATCTTTCAGGCCGTAATTAACATTTCCGTTTATTAATTT
TGGAACCTTAGTTCTGCTATTTTGGAACGGTATTTCTGGAACATATTGTCTAGGCCTCTG
CTGGCATAGTCAGGCTCTAATCTATTCAGTATTACTAATGATGTAACATTTTGAATCACG
TGTGCGCCTTTCAGGATGCCGATGCCCCCATTCGCAAAAGGGCCCTAGAACTTGTTTATT
TGTTGGTCAATGATACTAATGTAAAGCTACTGACCAAAAAGCTTGTCGACTACTTGAAAG
TAGCTAATCCAGACTTCAAAGAAGATCTCAGAGCCAAGATATGCTCTATGGCTGAAAAGT
TGGTATTTCTCTTTTTTAGGGGGTTTCCTGTTGATGTATGACACGTTTAACAAGGTTGCA
TCTCTAATAGGTTTTCTCAAGAAAAGTTATGGTATCTTGATCAGATGTTCAAGGTTTTAT
CCCTGGTAAGTGTCACTCTGTACTGCCTATTTTCGAGCTGATTATTTGAAGTTATTTATC
TAACGACCAAAACAGTTGTTTAGCTATGTGAATTGTTTTTTTCCACCTGATAATCCATAA
TTATGAGTTTTCCTAGCAAGTATTGCACATTTTCTCTTGAACATTCTCAAATTTGATAAT
CTTGTTACTTCTAAATTATT
