morexGenes - Barley RNA-seq Database

Contig contig_7219

Source Contig contig_7219

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_7219 (2811 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location	No map location

Predicted Genes from contig_7219

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76647	1	1344 bp	AK363193	Available	Available	None

CDS Structure of MLOC_76647

Contig Sequence (2811 bp)

>contig_7219 2811 assembly3_WGSMorex_rbca.fasta
CCCCCTCCCCCCCCCCCCCCCCTTGTAATCATGTCTTCTTGGAAATAAGCAGTGCCACTA
AGAGAAAAAGGCATGGAACGAATCTCATTTGGTTACCAGTGTTGGTGAAAATACTAGTTT
TATTGTTGTACTTCGTTGAACATTTTTTGTGGAAAAACAGAGTACCTGCCATCCAGACCA
ATCATCATCACAGTGGTTTGATCTCCAAATGCTGTAATATAGCGTGTGACTTCGGGTAAA
CGGAACTGAGCAAATGACCACTCTGAACTGAAATATTTGGGGAGAATCCCTGGAAAAATT
CAATGTGCGTAAGACGGGAGAGAGAAAATATTCTCAATTTGAATGCTAGTTTTCTCTTTC
ACAAGCTGTCATGCAGATGTACATGCCATGCGATTGTTCCCTACTACTTCAAGGCCAACA
TAGACATATCAGTTAAGCAAAAGGGATTCATTTGTTCAGTAATAATGTACCAATATAAAC
ACAAATGGCTGCCTGCCAGATCATGTTGGATAAGAAAACAAAGGCGGGACACGAGGACTC
CACCTAAGCCTAGGACGTTCAAACAGCATGACATGCCTTTGCTATGCTTATTTTTCACTA
TGTCCATATCTTAAATCGGAAATATTTACGTCTATGGATGTCATTGCCAGTCCAAACAAA
TGGGAACACACAGCTGGCACAGCAAATTACAAGAACACAAGCAAACTGCCAGGCTCCATT
TTGATTGGAATGAAACGAGGAGAGCACTGTTCAAGAATCTGGTGATCTAAGAACAGAATG
GGATAGAAACTACAGGAAGTGCTCTGTCTATCCTTATATTACCACATATATGATGATCAG
CCAGACTCAAACAATAGTTTTACCATGACACAACATTTTGATGGTATCAAGGTCTTAGCA
TATGAAAACAGATGTGCCACTTTATCAATTAGAATCCAGAATCACGCTAGGTTTGCACTA
AAAGACAGATCGACTTTGCTATGAGGTAATTAAATGCACGGTCCCAGTCTTGAAAGAATA
GTGGAAGTGCAAATTTATAGATATTCACAAAAGGCTAGTGAGATGATCAATTGAAAAAGT
GATAATGCGTATTTTCAAAGTGGCTTAAATGTTGAGGGAATATAATACTTCAGAAGATTC
AAATCAAATCAACTATAAAGGTTCACTAGAAGAAGTAGAGTATCCTCACCTTTCATGAAA
GACAAGGATGAGCTCGCATTGGATCCAACAGAACTGGATGAGTAACTACGATCCATTTGT
CGACCAGCAATTGCAGATTGCCCGTTACTTGCATCTTTCCCTCTAGGTCTCACTCTCAAG
CTGAAAATATGCATTGTGCCTTTGTCACTAGACACTGCCAACCACTGCAGGTTTGGTGAT
AGTGCAATGCTATATATCTCAGCTTTGTCTACTCCTCTGCGCACCTAAATATTAAGACCA
AAAAAATTCATTACTTCCCATTGCTAAAACTTATATAAAGTAAATAGATTACGCACAAAA
CGGAGGTAGCAAGTTACAATACAAGAGAACTCAAAAAGATGATACTGAACAAAGATTTCA
TCCTACATAGATGAAGCAAGTAAGAGAAACTAACGGAAAAAAGGAGAATATTTCATAGCC
TCACCTCCTGCAGACAAGCGCCGTCCATCGTGTTGAATATTCTGATCAAAGTACCCCTAA
CACTGGCTGTTGCCAAGAGGAGCCCATCCACGGTGAGTGTCATGCATGAAATGTTGGAGT
CATGAGCAGTGATGAACTTGGTCTCCTTCAACCCAAAATGCTCAACCCGAACAATTCCTT
GGTGCGTCCCAGGGCAGGCCATCACTGAAGTGTCTGCATGATGCGAGAGGCAGCACAATC
CTTTCGGGTTGGACGTGGTATCGATCAGATGGATGAGCTTCAGAGTCTTAAAACTGTAAA
CATGTATCTTGTGCTCGAGAGCAACCACAAAGTAGTCCTTGGACAATTTGACGGCTCGGA
TGTTGGACTTGAATGAGAAGTCACCAATGAGAAGGTTACGGAGATCATCCCAGATGGTGA
GTTTGTTTTGCTGATGCTGCTTGTCGGATCCCTGATCCACAAGGCCAAATATGCTGGTAC
GGAACAGCATCTCGACAATTTGAAACCCGCCGTCCTTGTAAACCCTCCTTAATTCCTCTT
TGAATGGTTTGCAACTAAACATCCTGAGGTCATTGGTTGTGGCAGCACTGAAGCAACTAT
GGTCCTGGTTCCAATTAACCGACAGCAGCTCAACATCCTCGTCCTCGACGTCGCTGCCGC
CTGCGCCCTGTGATGGGGATACCTGCGATGTCATGATGACACCAGATTGTGCAGGTGCCC
TTCTTCAGAATACCCCGGTTTAACACCTGCAGCAGTTGTTTGCTTCTCTCAGGATCTCAA
GATGGATGACAAGCATGAACTGAATTCTAAGAGGAAAAACAACCAAGAAACGGAAGCACT
ACTAGGAATATTCTCTTTGTGGGTTATAACACTCTAGTAGTCATTCAAAGGTTTTCCGTA
CTGCAATCGCGATTTGAAGTTAATAAAACTAGCAAATAAGAAGCACACCCTAATAACTAA
CTGAATTCCAAAACGCAGCACAACGGTCGGCAGAGTATGTATGCTGTCACGGTTGCTATG
TGTTGTGAAGAAATAAAACCCACAGTGGCGTCCCTCCCTCCCTCCCTGGGCGTAACGATA
GCACAGCGCGAAATTTCGAAATATATTTTTAGCTATGTACTCCTAACTCGTTACTATGGT
TCCTAATTTCAGCGACTCGCGGCAAGAGTTTTTAACCCCCGCTGGGGGCGC