Contig Data
morexGenes
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Map Locations of contig_72040 (2884 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location No map location




Predicted Genes from contig_72040

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76613 1 318 bp None Available Available None
MLOC_76614 1 727 bp None Available Available None
MLOC_76612 1 288 bp None Available Available None





CDS Structure of MLOC_76613






CDS Structure of MLOC_76614






CDS Structure of MLOC_76612






Contig Sequence (2884 bp)

>contig_72040 2884 assembly3_WGSMorex_rbca.fasta
GTCTATGTACATCCGTATGTAGCTTATAGTGCAATCTCTAAAAGGTCTTNNNNTTAGGAA
CGGAGGGAGTATTACTTATTTAGACTAGCCATTTACTCTTTTGTCAAGGAGTGTGCTAAC
CAAGTGTTGGGTACATGGGTGCATGAGCTTTGTGAAGCATGTGAAAGATGAGGATGGGTA
CACGGTGTCTGGTTGACTTTTCTGGTCGACTTAAATAACTTTGTTAATTTTCTGCCCATG
TTTTCTTTTGCTACGATGTCTGTTGGTTGTTTTATAAGCCGACCGATGTGGCTTATACTA
CAGTGCCTTAGCACTCACCACTGGCCTTTTTGAAATGCTGAAACCTGAATGCTAATATCG
GTTGCCACTAACTATCCAGCTGGCTACTTCCCGTCTCAAAAATTCTTGTCTTAGTTTTAT
CTAGAAATGGATGTATCTAAATACTAATACATGACTAGATACATTCATATTTAGACAAAT
CAAAGACAAGAATTTTGGGACGGGAGGGAGTACTGAAGGAAAACATAGTCAACAAAGATC
TACTGCTCACTCTTTTTTTTTATGCATTAGGAAGCTATGACTAATAATTTACACATGAAT
AGTTTCATTTACAAATGTACTAGTGTACCTGCCATTCCTTTGCCATTCTGTTGTTCTGTA
ATTACGCCAGCCATCATGATTAGTAGTTGAAATAACAGTTACTCGTCGATGAGGTGCTTG
CCATTCTTTTGTTCTGTAGTTAGACACCCATCATTCTTTTGTTCTGTAGTTAGACACCCA
TCGTGATCATATTATTTAAAACAACCTGCAAAGTGAAAGGGATGATTTGGTATCATGTAC
TCCATCCGTTCCTAAATATAAGTCTTTTTTAGAGATTTGATTAAAGGACTACATACGGAT
GTATANNNNNNTATTTTAGAGTGTAGATTCATTTATTCTGCTCCGTATGTGGTCCCATAA
TGAAATATCTAAAAAGACTTATATTTAGGAATGCCGGGAGTAGATCTAACAGTTGCTCGT
GGATGAGGGGATTGCAGCTGCTAGTACTTGCCTAGTATAGCACTCCCTCCGTCCCATAAT
ATAAAAGCGTTTTTAACGCTCTTACAAGTATTATGGAACGGAGGGAGTATTTCTCAACCA
TGACGCTGGTCTCATTTAGCTGTTGTCGATTTCCCCTGCAGATAAAGGAGATGAGGCTGA
TCTTCCACTCGAATCAGGATGCTGTAAGGCAGTACATTGCCCGCACCGCGAAGCTCCAAT
ACTCGTACCAGCCGGGTTTCTGAGCTTCGCTCCAATACTCGTACCAGCCAGGTTTCTGAG
CCCGCTTGCCAAGGTTGCCCGATGAGCGGCGCGTCTGCGTTGCTGCCAGTAGTTAGCGCG
TCAGGTGTTCCAGGGCGTTCACGTTTTAGATGAGAGTGTGATTATTACTATTATCTCGGT
AGATGTTCTCGGCCACTTGGGATGCGTGTATATACATACACGGCAACATGTGGTATAACA
TGTCGACTGGTTTAATCTATTGATGAAGCACAAACTAGTTGAGACAGTGTAGCAAGTGGT
GGCGATTTACCTTGCCTTTTTTTATTTTCCGTTGGTAGGCTGTGGCTTGTGCCATCAGTA
GGAAGGAGGAAGATGGGCGTTGTAGCAGCATGTCAAGTGCGGGCGGAATAAACGGAGGGA
CGCGAAGGGAGATTCCGTGGGAGGGCACCTCCGGGAGAAACCATTGGGCCTAATGAAAGG
CAGAATCATCACCACCTCCTCAGCCACGCACCACAGTGGTTTTACACGGCAGCCTTTTTT
TTCTCCTTGGAATGAAAAGCGAGCGGGCGCCTTTCCTTCCTTACTGGGTTTCTTTACTTG
GCAGAGCGAGTGTGAGTGTGAAACCATATTAGGATTGGGAAAGAAATTTGGTGTGCACGG
CACGGAGATGTTGCTGGGAACTTTTCTAGGGGTGCTTTTTAACCTTCTTTTGGGGTTTAG
GCAGGTGAAGCGCAGGGGATTGGTGCACTTGTTCCGTTGGCACTTGGCACATCACCTAGA
ACCATGTAGCTCAACCAACACACCCACGGACCACCCACCCCATGGTGCGTTTGCGTCGAC
AGAAAACACCAAGCCACGGCCGCGGTCCGACGTCGACTCACTCAACCAATGCCGATCGGA
ACCTTGGACGCCTTTTCCATTTGGCGGGCAACGAGCCAGCTTCAGCATGAAGAAGCAGCA
TTCTCTGTCTCCGCCCCCTCGCCCTCGCGTTGAGGGTGAATCAGCCGATCTCAGTATCTA
TATATTCTTGATGAGACGCCGGTGGCCGCCATAGCTCGCCAGCTCTTCGTCTTATCTTTG
GAGGGGCGATATATGTGGATCCACAAGCCTTTTATTTACATTTATTTATTATATATAAAC
ACAAGATTTTTTATATGCGTGTATCCCAGCTTACTTTGTAACAACATATTTTTTTTCAAA
CACACGATACGATCAAAGTCGTTCATATACACCAGCAACAACCATAGACCTTTAGTTGTA
GTAGTAGTAGTGATAATTCCTTTAAGAATGCATTGGTCACCCGTGAGGCCGTGACGCAGC
AGCAGCAATAGTAATAACGCATCAAAAGTTTCCATCAATAGAAAAAAAAGCAGTGAAGAA
CGCATCCGGCAACGAGACTTTCGGCGTTTCTATCTGTTTGAAGAAAGTAAGATTCTTGCA
TTTTATACAATGGGAGGAGACGCAATCATCCAAGGATGTGTCGGTTCCAGGAGAGAAAAG
AGAGAGAACCGTCGTTGCGGGAGGAACCGCTTGACGGTTGGTCAAGGGGAGATTTTCCCC
TAATTACATAATTAGTTTTAACACTCCCCCTAATCTATACTTGACCATGTGGAGTTATCT
TCAT