Contig Data
morexGenes
Links



Map Locations of contig_72000 (4952 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_72000

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76600 3 1658 bp MLOC_76600.2 Available Available LOC_Os11g02464.1, FRAME:+2, EVALUE:0.0, 13111.m00177 protein vacuolar-sorting receptor precursor, putative, expressed





CDS Structure of MLOC_76600






Contig Sequence (4952 bp)

>contig_72000 4952 assembly3_WGSMorex_rbca.fasta
AGTCGGTTAGTTTGATACACTCCGAATGCTCGTCTTCGACTGAATGGTGGATGATTCGTT
ACCGACTGGATGATGAGAAGTCCTTAATTCAGACGGAACTGACTAAGGGTCTTATCCCTN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTAGGACTA
TAACCCCATCAGGGGTCAAGGGCGTTGCTTCGGTCATTGGTGGAGGAGCTCGGAGCGGGA
CACTGGATCTTGATCAACGACACATGTCGTTCGCTCGAGCCATGGTTTTCCTTCCTAACC
TCTATGGTTGTGGCTTTCCTTCCTGTGAAAACAACATGGGTCTCTAGGGTCACCTTACAT
CTCGAATGACACAGTTCCAGTGACACTGTCAATATCCCTGGGCCACTTGACCGTGGTTCT
CCGACCAAGGGACATAGCGGGGATCCATGGGATCCCTTACAAGGCCTCAGGGTTTGATTA
TGATGTATTGATGATTACAAAATGAATAAAGAGGGCTTCAAGTGTATAATCAGGTCTCCT
TTGGTTTGAAGGAATATCATTTGGTTTGAAAAAATATTATAGGAATTCTATAGGATATGA
TTCTTACAAAAAAAATAGAGCCTTTAATTCGAAGGAATTGATTTCTATTCCTACATAGTA
CATAGGATTGGTTCCAATCCTCTACATTTCAAAGCAAAATAAACATGAGCCTAGACATCT
TTATAATGTGAACCAAACGACATCTCCTTTTCAATTCCTACTGATAGGATTTGAGATACT
CCGTACATGTCATCAGTGCTAGGCGCCGGCGCGCCGGTCCAACAGTTTCGGCCGGTCGCG
CCCCCAGCCGCCCGATGCAGCCATCCCCAACCGTCTGATCTTCCCCTCTCCTCTCCCCTT
CTCCCCTCGCGTTGACTTCTTCGTCTTCTTCTTCCACGCTCCCACCTCGGCCGCCCTTGC
CGCCGGCCACCCCCTCGCCTGGACCTCCTCCCCCCTGCGGTCCCATGCCGCTGGATACGC
TCTTCGTCCCCGTCGCCGTCGGTTGCCGTCCTCCTCGCCATCGGTCGCCATTGCAGCTCT
GTACTCGCCCCTCGTATAAAAAAACGACGCCGTCTTGAAGCTTGCCGGCATCCTTCGTCG
TTGCAGCACCTAGCAGCCGCCGTCGTCGCCGTGCTGTCGTGTCGCCGATGCAGCTCTCAA
CGTTGTCGCTCGCCACCATTGGCGAGTCAGGTTGAATCTTTTTCTCTCATCACTTGAAGC
TTTTCCTATGCCGGTTGAAGCTTTTTTAGCAGATGGAAGCTTTCTGCCATGTCGATTGAA
GCTTTTTTCACCTAGGGTTGCAGCTTTTTTTGTAAAGTGTTGCATCTTTTTTCGTAAGGG
TTACAACTTTTTCATTTTGGCTAGTTGAAGCTTCCCCTCTTGATAGTTGAAGCATTTTCT
ATATACATTTGAAGCTTTTTTGTCAACGGTTGCAACACTCGCATCGTCGTTGAAACTTTT
CTGTCAAAATGGTTGCAATTCTTTTCCGCTTGCACAGTGATGTGGCTGAAGCTTTCTCTA
TCTACGATTGAAGCTTTTGTGTCAAATAGTTGTAGCTTTTTCTTGTTGGGCAGTGCCGAT
TGAAGCTTTTCCTATCTACAGTTGAAGCTTTTTTCTACAACTGTTGAAGTTGTTTTATGT
GACGGTTGCAACAGTTGCATACGCATGGATCCGTCCATGGCAGGAGACATCCATGTCATC
TCCCGTGGCTCGGCCCCGGCGCCGGCGATGGTAGAATTCATCCAGTAATGGTGGTTGCAG
CAGCGCCCCCTTCCCCTCCCATATATACCTCATCATTGGTTTCGTCGTTATTGGTCGGAG
GCATCCGGTGCTCGGACCTTGTCGCGTGCGGCCATGGAAGAGCGCGTCTCGAGGCGACGG
GCGCATCCATGGCGACGAGGGGCCGAACGGCTATGCGCGAGCTCGCTGGTCGGTGGTCGA
TGCATCACAGAGGATGCGTGGGACGTGCCGCAATGCCTGCGCGGGGAGGGACACGAGGAA
AGAAGATAAGTCGGGAAAAAAAGAAAGGAAAAGGAAAAAAAAACTGTGTGATTAAGTTAG
AGCTGACGTCGTTGATGGATCCGACGACAACGTTTCGGCCAACCCTCTGGCTGAAAACGT
TTAGCAAAGGAAAATTTCCTAAAAAAATAAAACAAACAGAAAGTAGAAGAAAACGCTACA
CGTTCCTCACGTGTTCGCGAGACTTCGCCGTCCACCTCCGTCGCCTTCCCCAACTTCCCG
ACTCCTCTCCATCCAAGCAGCAGCACCGCCATAGACATACTGCGCACGCCCAGACCAATC
TGCTGCTTCCGGGCTTGCCGGGTTCAGCGGATCGTGAGCTTAGACAGACCGCTCGATCAG
AGCGCTCCTGAGGCACCGATCCTGCCCCCGCGCGATGGCGTCCCCGCCGCCGCCGCTGCT
GCTAACGCTGGTGTGGGCGGCGGCGCTCCTGTGGTGCGGCGGATGCGACGCGCGGTTCGT
TGTGGAGAAGAACAGTCTCAGGGTGACGGCGCCGGTGGCACTGAAGGGTGCCTACGAGTG
TGCCATCGGCAACTTCGGCGTGCCGCAGTACGGCGGCACCATGGTCGGCGTCGTGGCCTA
CCCCAAGGCCAACCGGAAGGCCTGCAAGGGGTTCGATGACTTCGATGTTTCCTTCAAGGC
CAGGCCCGGGGCGCTGCCCACCTTCCTGCTCGTCGACAGGGGAGGTGAGGGAACATAACC
GCTTCTTCGTTTTAGCTGCTGCTGCTAGTTCTAGTTCTGCATGTGTGTATCGATTGGTTG
GATTGGATAGGTCGCGCATGGAAAATCGGCCCACATATTTTATTTAACCACGTCCGAGAT
CTTGCCAGGCGATGATGTGATTAGCTGAATAGTCATTGACCAATTTTGGCACAACGACCA
AATCTTTGACCAAAGCCCACGTGGATATTATAGTGGCTACATCAATGACTTGTTGCACTG
ATTTCGTTCTCAGCCAATTGTTGTTGGACACGCTTTCTTGTTTGCTCAGCAACGTCACAT
TCTACACGGTTAATTTGGATTACACTACATGTTGTTTTAAAGACTGATTACATAACATGG
TTTTGTTGTTCTATACAGATTGCTACTTCACAAAGAAGGCATGGAACGCGCAAAATGCAG
GAGCAGCGGCGATCCTTGTTGCCGATGACAGGGATGAACCTTTAATCACGATGGACACGC
CTGAAGAGAGTGGAAGGGTGGAATATTTAGAGAACATCACCATCCCCTCGGCGCTAATAT
CCAAAAGCTTCGGGGATAGGCTCAAGAAAGCTATCGATAATGGAGACATGGTTAATGTGA
ACTTGGATTGGAGGGAATCTCTGCCCCATCCTGATGAGCGTGTTGAGTATGAATTCTGGA
CTAACAGTAACGATGAATGTGGTCCAAAATGCGATAGCCAGATTGATTTCGTCAAGAGCT
TCAAAGGAGCAGCCCAGATACTTGAGAAGCAGGGATACACACAGTTCACTCCGCATTACA
TTACATGGTATTGCCCGGAGGCCTACACTTCAAGTAAGCAGTGCAAATCCCAGTGTATCA
ACCATGGGAGGTATTGTGCACCTGATCCGGAACAGGATTTCAGCAAAGGGTACGATGGGA
AAGATGTAGTTATACAAAATTTACGCCAAGTCTGTGTTTATAAAGTTGCTAAGGAGAGCA
AGAAACCTTGGCTGTGGTGGGATTATGTGACTGATTTTGCAGTTCGGTGCCCAATGAAAG
AAAAGAAGTACACCAAGGAATGTGCTGATGGAGTTATCAAATCACTTGGTACATTCATCT
GTATATACCTTCTTATTTTCCACTCTGAGATGCAATAGTTGTATTGAATATGTCTATAAT
TCCAGGCCTTGATCACAAAGCAATAGATAAATGTATTGGTGATCCAGATGCTGATGAAGA
AAATCCTATTTTGAAAGCTGAACAGGATGCACAGGTTAGCACTTCTGTGCAGTCTTTTAT
ATTCATATTCGTATGATTGGTGATCTCTGATTTGAATGTAACATCCTCTACCATTTTGCG
CAGATTGGCAAGGGCTCTCGTGGTGATGTCACCATCTTACCAACTCTTGTAATTAACAAT
AGACAATACAGAGGTGTGCTCTTCGAAGTTCTACAGTTACCAGTTTTTTTTTTCTGGTTT
AAGATTCTGTGTATGCTTATCTGAGTCTTTGTTTATCAGGGAAACTTGACAAAGGAGCAA
TTCTTAAAGCACTTTGTGCTGGATTTCGAGAAACTACCGAGCCAACTGTTTGCTTGAGTG
AAGGTTACATTTATTTCACTACCTTCCCCACTATTTATGCTGAATGATTGACTTGCTTGT
CTCTTGCTCTTAAACATCCACCGTTCATGTTATGTTAAATTGTAGATATACAAACAAATG
AGTGCTTGGAGAACAATGGTGGATGTTGGCAAGACAAGGCTGCTAACATCACTGCTTGCA
AGGTATCTTGTGTGATGTTATCTCTTTCTGTAAATAGGTCATTGTTTTTTTTTCCTTTTC
TGTTTTACCTTATGCAGGATGATACTTGCTGGTGGTTATGCAGGACACGTTCCTTGGAAA
AGTGTGTGAATGTCCAATTGTGAAAGGTGTAAAATTCATTGGTGATGGTTACACGCATTG
TGAAGGTATATGCTACCCGGAATCAGGAACATTCATTTTCTTCCTTCCATTATGACTATT
TTTTTTTAGAAAAGGAGGCAAAGCCCCGGCCTCTGCATCGAGAGATGCATGCAGCCATAT
ATTAAAATCAAAGCCAAAAAGTGAATAAAAAGATACAAGGCGTCTGTCGCGCCCAAACCG
GAGATGACAATAGACCTAGATGACTAAACACCTATCCTATTAATATGTCGTCATCCAAAC
CGGTTGAAGATACCCTGTGCTACCATCTTTCA