Map Locations of contig_71949 (3577 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_71949

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76591 1 329 bp None Available Available None





CDS Structure of MLOC_76591






Contig Sequence (3577 bp)

>contig_71949 3577 assembly3_WGSMorex_rbca.fasta
GGGCATATTTCCAACAAATACATGGTATCTCATAGATCAATCATTTTGTTTTAGTGTATT
TATCATTGTTGCATGTGTCATTTTTATCCGAAAACTATTTAGGTGTAATTAAATAAAGCG
AGTTACTATCTAGTTCCCGTGTTTTAGGTATCAAATTTGCCTTCACTACTTGTGCTACCC
TGTAGTAATTTGGCTAAAGGTTCCAAAATTGGCATGTGAGGCTGCCTCTCTACCATGTTC
AAAACTTTTTTTTTAATATAAGCTTGTTTATAACTTTGTTTTGAAATCTCTAAGCATGGT
TGTATACTTATGTTTACACTTTAAACTTCTTCCTAAACCCTTCACCCCCGCTGAGGCATG
GTTTGACGTCAAGCATGAGGCAAATTTGTTTGCCCTTTAATAATATAGATTACTTAGTGT
GGGTTGCACAGATATATCACAAGTCCTCCTTGATTACCCATATTAATGTTTTCCCTTCAC
GTGTATCATTTCTTGTAGCAAACAACGAGAGCTCTGTAACAATTCTTTGCAGTTGGAAGA
AATGCACACATAAGACAGAAGGTATTGCGAGCCAGGCAGTGGCGAAGGCAGGAACAAATT
TAAGGTGTGGCAGAGCTTACGAAAGGAAAAAACTACGATAATACAAGAGATCATTTGATA
CGGACATAATACTTTGTGTGAGCATTCCCACATGGATGAACCAGCAACCAGTCCCAGCAA
ACAAGCAGATATACATTGATCTACGATAGTGTGTTGGCTCAAATCTGAGAAGTTGTAATA
TATATATTGTATCACCTTAGTAAATGCGGTAATTTAGATGTGGCGGATGCCAAACCTAGC
CAGATAGCTGGCTCCGCCACTGGAGCCAGGTGCACATATGAAGATCGGACAGAGAAGTAA
TGACGGAAGATGAGGACCATTTTTTGTTCAAAAAGAAGAAGATGGAGACCATCATCAAAC
TTTACCTATTCGTGTTTCGGGTCGGACTTACATGCGGAGAAACGGAAATCATGGTCTCCA
AGAATGGAGCGAAGTGGGAGAAATACATCGGAGTTTGTGAACATTTTTTTTTTGTAGAAA
GACCAATTGGTTCAATACTTGGTCCCGAAATTTCACTATATGATTTTGTAAATAAATGAA
ATGACATCCAATATTCACTTAGATTGTTTTTTACATGTCTTTGTGGTTCAAATTCCATTT
GTTAGACTAGCATGTACTGATGAAACTATCTCCAGTTTCTATGTATAATCATCAGATTTC
GATAAGAATTCGAGCATCTTTTGTTTTCATTTTCCATAACCAATATGTTTTGATGTGTTT
GCTTTGACCAGACAATGTCAATGAGTTGAGTTTAAGAAAATCACATGAAGCATTTATTTG
AATAGCATGGTAGTCCGAAATCCAAGTAGTTCAAAAATACGTGCCTACATATGAGCTTTA
CCAATCCATAAATCACCAAATGACAAGTATAGCAAGAGCTAGCTTATAACGTCATAGTGA
AATTGTATGGACTGAAGTACAGTGATGCCACCAAAGCTAGAGCAAGAAGTGGACCGCGAA
TAAAAAGGGCGAAGGAATAGAAAAGTTTGTTTTGTTGGTTAGCTGCCAGGACAAATACAA
TGAAAGAAACATTATTATGTTGTCCCGTGGCAAGGCACATGTATTTAACTAGTATGACAT
AGACTATGATTTATCCTATCTTATCTTGTGCTTTAAGTTGGTTATTGTACTTCTATCTTG
TGCTTTTTTGCGTTTTTAACACACACAAAACTAGTTGGGCTTGGGCCAGCCCAACTCGGG
GCGCTGCAGGCGCCCCTTTGCAAAATACACGTTAACGGGCGCATTCAGCATAAAATAGGG
TTTGCCAAGTTTCTAATATGCATTTTTTGCGTTTTTAACACAAAAAAGCTAGTTGGGCTA
GCCCAGTGCGGGGTGAAGCACGCATTCGTTTGCAAAATACACATTAACGAATGCCTATAA
CATCAAATACGGTTTTCCGAGTTTCTAATATATGATCATCATGTCCTTTTTTATAAAAAG
GTATGAAGTAATTTAAGCCGTTCTTCTCTTTAAGAAGGTGAACCGAAGCAAAAATATTTT
TAATTTTGCATCTGATGACGATGATTTTTCCACTTCATAAGTCGTCGAGCCACCACCTCA
TCCTTCATGTTACCACTCTCCTCGTCCCATGAACAACCGTAGGTTCAGTTCCTGGTAGGA
TTAGATAAATAATTGAACAATTTGTGCTCCCGGGTGCTTCTTCGGTCGGCTTACATGAGT
GGAATCAGTCCTATATAAGATAGACTATGATTTGTCCTATCTTATCTTGTACTTTAAGTT
GGTTATTATACTTCTATATTATATATAAGTTTATGAGGCTCAAGCAATACAACAACGATT
TCACCAATCCATCATATTCCGCACCAATCCCTCCCTTTCAACATGGTGTCTCCCGCAAGT
TTCAAGACCTACCCGCCGCCCATCGCTCCCACCCCGCACGCCGCCCCTAGGACGATCGGC
ATCCATGACTGTCGTCGGGTCTGCGCTGCCTGTTCCTAGGGTTCGTGTGTCAATCGTGTA
TACCAATTGCCCTAGAGAGTCTTTTTCCCGATTTCTTGATCCCGGATTTTCACTCTTTCA
CCGGTCACTTTGATCGGCGTTTTATTTTTGGTTTTCTGATCTAAGATCGGGTTGCATCAA
CCACCGCCGCTGTCGACACCTGCACGCCTCTACTCCGACAACGGCACGACCTTGCCCTCT
TTTTTGACCCGACGGCCTCGCGCACCGCATTGGCCCATCGCGGCCATCGCCCGTGCGACC
GCCACCCGTCGTCCAGAGCTGGTCGTTGCCGCCAACAACGCGACACCGAACTCTTCTATG
ACCCGGCATCCCATCCTAGTCGTCGTTCGCAAGTCTGCATGCACGTCCCTCCACGTCAGT
CGTCGTCGCCCGCGTCCAATCAGGATCCTGCATCACCTACCCTCTCCATCGCCACTCGCC
GGTTGCCTTGGGCTCACCGTCTCCCAGGCTCAGGTGGCCTTGTCGACTCGGGCTTTTCCG
GCTTGGGTCTCCGCCGCACCTTGTCGGTTGCCTCCGGCTTTTGCGCTCGGGCGTCGGCTG
CCTCTGGCACGCCGTCCCATTGGTCTGCTCGACCACCCCTATTCACCGTCCACGACGCCG
TCATCATCATCGAGCAGCGCCCCTAACCTCGCATGCGATCAGATTGATCACCCGCTTGCC
ATGATTGACTTCATCCGCGTCGTCATCCGCGTCGTGCTCCGCGTCGTGCGAGTCGTGCGA
CTGACCTGATCAGTCGGTTGCATGCGCCTTCGCAGGTCGTGTGAAGGTTGTCCCTGAGTA
CAGTGCGTCCCTCCATCGATCGAGCAATGAGTTGTTGCTGCGTCACCCCATCGGGCTGCA
GCGCCGCCGTCCATGGTTCTCTCTATGGATGCCCCGATCCGCGAGCCGCCACTACACCGT
CCTTCGGGCTACAGCGTCACGGCACGCGGTCCCCGCCGTCACCCGAGGCTATCCCCATAT
CTACACAAACACGTGCACCGCCGTTGTGTCGCCCCTT