| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_71885
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_76565 |
8 |
1372 bp |
None |
Available |
Available |
None |
CDS Structure of MLOC_76565
Contig Sequence (5692 bp)
>contig_71885 5692 assembly3_WGSMorex_rbca.fasta
TTTGACAAAAGATATAATCAATGATCGGCATCGACGCTTTGAGAGGTATGTCAAAAAGCA
AGAGCTCCCCCTAAATTTGTGAATTATTCTAAATTTGCATTTGAATGCAAATGCANNNNN
NNNNAGGAATATGGGTTACTCTTCCATGTCCCATACAACTTGGTGGTGCGCATAAAAGAT
AAGAATGAATATCAATGCACATAGCACCAAAAAAAGTGAATGATCATGATGTAGATAGCT
CATAGGTAATAACATAGTAGCATCACACAATCAAAGCGTATGATCAAGCACATATCTAAA
TTCTACGACATTATCTGTTTGCATCCAAAAGACCAAATAAAGTTTTGAAAACCAAACAAG
AGCAAAGAAAAGTCAAAAGCTCTCCCTCTCTCAAAGCCCTATTAATATATACACTTCTCC
CCCTTTGGCAACAAGTACTCAAAAGTTCAAAGGTCCAAACTAAGCGTCTCTCTAGGCATG
ATCTCCTCTGGTAGCAGGTCTTGGAGTAGACAAGAGAGCATCGACGAATGATTCGATTGA
TGTCACTGGAGCAGGAGCTGGAGGTGTAGACACTGGAGGTGGTGGAGCAAGAGCTGAAGC
TTGAGCTGACGAAGACGACCTATCTTCTAGTACTGGCACAACTGCTGATTTGGTCTGTAT
CGAGAAATGTGTGGTAGTACAAAGAGGTGAATCATCATCATCATCGTCATCATCCTCATC
ATCTTCATCATCCGAGCATGTAATGTGTACTCAGTCAACATCATGCTAAAGCTGCTTGAC
TGTAGTGGTCAAATCTGTAACCTTCACATCCAGGTCATGGANNNNNNNNNNNNNNATCCT
CTCTAGGCTCTTCTAGTTTAATAGAATCTTAGAAATATTCTTCTCCATCCCTCGTATGGT
AGTGACCAAGAACAACATATGTTCCTCTCTGGTTTTAAGCTGGGGTGGTGGAGCTGGAGC
ATTCTTAGCCGCCTCTGCAGCTGTTGGCTCTAAAGCCTCTCTAGCTGTAGCTGAGTTTGG
ATGAGTGTCATCCATCACAACTTCGTTATCCTCGAACTCTGGCTGAAGTGGTAAGCGGAT
GACCAAGCTGATACGCATGCTTGCCAATCTTGGCATTGATGAGCATTTAAATGTATGATG
CATATTTGCAAGATCTCTTCGAATCTACAGAAGTTCTCCTAGTAGTCTCAACAATCAAAT
CCATGACTTGGAAGTGAGTGTGGGGTGTCTAAATGATGCAACATGTTGATGGAATANNNN
NNNNNNNNNNNNNCATCACCTGATTTGGGCATCAGGGTATGCCTCAAGATAGTATTGGTA
GTGGTTATTCTAGGTTGCAAGAAATAGCCAGACCCAAGCTTGTGAGATGGCAGGAAGTCA
TTTGGCACTATCTTGAACATATTTTCCATGGAGTTGTGATTCTTCTTTGGTTCTGAATAT
ACATCCAAGTCCTCTGCTCGTGGCTTTGGAGAACCAATGATAGTAGCCCACTATTCAATT
ATGGCTTCATACACTACAAGAAAAATACTCACTTATGACAAAAAATAATGACGGTGGTTT
AAGTGGTCATTGAATCATGACCAAAATTCTAAAATTAGTCATGGCAAGTCTAAGAGGGTC
CAAAGCCCATAACATTATGACCTTTTACATCCATTAGGTCATGATCCTATTGCACAAACT
GGTCATTAAGACGTGTAGAATTATTTATGATCATATTTCAATGCTGCCATGACCAAATAT
AAGATCATAAACATATATGTGGAGGTGACTAGATGACACCTCATCAATTTTTCCTATGTG
TCATGTATAGAGAGCAAAAATTTGTTTTATACGTATATGGATGAAGTAAATGATATTAGA
TAAATATCAATAAATTATAATTATTCATTTTAATATCCGAAATATTTTACAATGTACAAT
ATAAATACCAAAATGAAATATATGAGCCCATGCTAATCTATAATTTGTAGACCTTATTTA
GATATATATTTTTGAAAGGTGGTATAGGGTACCTTAACTTGGTGTTTGAGACAATAAAAA
CATAAATATGACCTCATGCCTCATTTTAACAACTATTGTAAAAGTTCAGGTAAGAAGTAT
GGAGATATAAAAAGTTTTCAACACATTATGTTGAATTTTTTTCCAATGGCAACCCACATG
CAATTTGTATAGAAATAGAGAGGTGGCAGCCCTTTCTTTTCTTATTTTTAAAATCAAATA
AGTTTGCCTTGTTGAATATATGTACGTTTAGAGATACAAGGATGACGCGCCTTGCTGATT
GGCCGCACAAGTGCTCTTTTGCACTACGTGTTCATAAGAAAATACACCTAAACTTATTGT
ATGTGTGCCTGAAAATACAACGAAACCACGTCCCTTCGACAAGTACAATGATGTGGATAT
ATGGTTGAACCATCTCTTTTTTGCAATCAAAAAATATAACTAGAGACAACAATATGAATC
TATATTTCCTAAATGCAATATCTATACGGACTTGAGTAGACCCATTAAGTGAATAGGATA
TAAAGTCCCTTCCCCACACACGTAACCCTAACCCTATCTCCAGAGTCCAGACCCATCTCC
CTCGACTCCCCTCGCATCTCTCCATCGCCAGCCTTCCTTCCCCTCACCAGACCCCCTGTG
CTCCAGTCCGCCACGACAGGCCCCTGCGCTCCCTTCTCCACCTCTCCCATCAACCTCGTA
GGCACGATCCCATGTGCCCAAAGGAGAACGGCGACAAGGCGGCGATAGTCGTCACCGGGA
TCTGTCGCCCGCGCTGCCGCTTCCCTGCCTTCTTTGCCGCCGTCGTCGTCCATTGCCGCG
GATGCCTCCTCCTCGCTCGCGAGATGGTACGGCCTCCCCTTACTCCTATCTATGACGGCT
CTAATCAGTGCTCTTTCCCGGATGCCAAGTTTCAGCTTTCGTTCCTGTCCGTGGGGTGTA
GTAAGCATTTAGGTTTGTGATTGTGTGGGTGGCTTGCACAGGGAGATCTAGAAATAAGCT
TTCCGACACAGGGAGACTAATAAAAATCTTTTTGACACTACAAGCTTTTGTATTATGGGA
GAGAGATTAGAAAGGTAGTTTAGGTCCATGGGTCGGGAAGGGAATTTGTAGGAAAAATTG
GATAAACTTATATTAGTATTTCAAGTCTGCCCAATACATACTGTTCTGATATTTTGGATA
CTCCAACTCTCCTACTAAACACACTAGGCCTCTCGAATATTCTATGGTAGTAAATAGGAC
AAAATTGTAGTTAATCCCAAGAAGTTTCTAGCCAGAATTTTAGATCACGAAAACGGGAAA
ATGCATGCTATGTTGTTACAGCGACAGTATACATCTGTTGACTAGCGTTACCCCACAGCA
GAGAAGAAGCCTCCCAGCTCGTGCTTGTCAACTCCATGTCGGCTGCTCGAAGCATCCCTA
TTTTCTGCTTTCTGTATATGAATTGAAGTACTACATATAAGTGATGTATTACATCAAGAT
GACATATATCTGATTTTCCATATTCTACATGAGATGGCTTATGTATGTTCTAACGGATGT
TGCCTTGTTTTGTGCAGGCTTATTGCATGCTACACTGGTCCAACAAGTAGTGTATTACTT
CCTAGATGATATATGCATCGGACAATGGAATGATTCATGTCATTCGTCAATCAATGCTAG
GCTCTGTATTATCCAATATATTAGTACTTGGATGTGTTCTTTTTTCATGGATGTCTTGCC
CATCCTAATAGAGACCAGTAAACAAAGTACGTAGTTATTACCAGAACATGTTTCCATTTT
AATCCTCATATTTGATCTCATCTGTAAACTCAGATTCTTATGATTGTAGTCTACGGTCAA
ATATTTCCAGCACTGCTACACTTTATACCTTCTCAAGCATACTATGATTTTTCTTTTGAG
CTTATTTTATTTTGCAAATAGAACCATTAGCTTGTAGGATAATTTTATGATTGTTGTCTA
TAGTCTTATTTTATTTTGCCTGACAGGAATCGGTGTGTCACATCAACAGGATAATTTTGT
TGCATCTAATCATGAATACAAATCATATTATTTTGTTGACAACACAATCATCAGTTCTAA
AGTCTGCCTCTAAGTCAACGAAAGACACTCCCAAGGTCAGAACCACCATTTGTAATTCTA
AGTCTCGCTTTCATGGTAGTTGGAATTGGCGTCGCCACCACCAGCACGAGCATTGTTGGT
GCAAAGGTTAGTTTTGTTGATGGCCTGCTCACTCGTATTTCCACTGGAGTTGTCATTAGC
TCCACCATTTTCACCCAAATCACCATGAACAGTGTTGCCATCCACGGCTTGGTGTCCAGT
ATGAAATGAATTAGTTGTCCCCTATATCATAGCATTTATTTAGACATACCAGGAGAGCTT
ATGAAGTAGTATCACTAAAAGCAAAATAAATAAATAGCAATAGTTTCTCAGTTTATGGTC
GCAATTAAACCATCAGATTGAAAATATGAATAATTGTACTGCCACATGTCCTTTTGTGAG
TAAACCATCAACACATTCAATTTGGACATATTTGACCAACAACTTAAGTAGCCATTTTAA
CTCAGAGATGATCAAAATAATAGTAAACACCTAAACTCATAGATTTTTGGGCAGATTTGG
CAAACTTAAGTACTCCCTCTGTCCCAAAGTAAGTGATTCAAAATTGATTCAATGTTGTAC
TAACTTTACTATAAAGTAGAGTTACTTTTGAGTCACTTATTTTGGGTCGGAGGGATTATA
TTATAAGCAGCAGAAATAATAGAGAAAATATGTCATCTTGTGGACACGAAATTTGGATTG
GCATTAATGAACAAATAAGTTAATGGTAACATTTAACATGCATCATGTTTGAAAAAAGGA
ATTCTTATGTCAGTACAGAGAACCACAACTTAAAATGCTAAGATATCAAGGTTGCAACCT
ATCAGACATACACTATGCTGAGAAGGTTATGGGCAAAGAAACCCCACTCTTATTTACTTA
TAGGAAATCATTTACTTACATGTGGTTGGAAACTTTCTCCTGGCTGTAGCTCCGGTGGTA
GTTCTTTTCCCATCTCCCTTAAAATGGTCTATGAAAAAATTATGCAACATTACAATAGTT
AGTTTCTGAACCACTAATTCGAAATAACAGTGCTAAAGTTGTACCAGTGCTAAAGTTGGA
ACCTTGTAATGTCAATCCCGTGTGTTCCTTCATAACAGTACAAATATTTTTTACATACAT
GAACCATGGTAAGGCTATTTTGCAAAATCTGTGATGTCACTTGACACCATAAAGATGTAT
GTAGCCTCACCACTGCTACTGATTTTTGTCCTGGACAAATCGATTGCTGATTTCTAGTAG
TGTCTATGTAATAGAAGATGAGAGAAATTATATTTACGTATTGTTGACACCTTAATCTTG
CATCTATGTCAACAGAAGATGAGAGAAATTATATAACTTTTACGCTCAATACACTACCAC
TGTTGGAGGATGAAATAGTTCTAATTTATTTATTACTGGTATTATAATATTTGATTATTT
TAAATGCTTTCTTATGTTTGATTATTTGAATTACCAGGATGATCTGAAGCACCTAGAAGA
AGCAGAGGACAGGACAGGAGGGGGGAACAAGAAGCTTCGTTTATCATTGATGTTATGTGT
GATCAACAAAAACTTGTGCTTCTCATCCAATCTTTGTCGAACTATGTTGATG
