Contig Data
morexGenes
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Map Locations of contig_71788 (4808 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_71788

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76546 2 2193 bp MLOC_76546.2 Available Available LOC_Os03g03910.1, FRAME:+1, EVALUE:0.0, 13103.m00392 protein catalase domain containing protein, expressed





CDS Structure of MLOC_76546






Contig Sequence (4808 bp)

>contig_71788 4808 assembly3_WGSMorex_rbca.fasta
TACGACCAAGAGTTTCAGTTTCAGGATGAGAATGTTGTGCGTGAACATGGAGGAGCGGCA
ACGTTTAAACAGTTCACGCAATTTCATCAAGGCATGCGTGATTGGAAAACTCACTTGCAA
TTGTAAAATGATTAAAATGATTTAAATGATTTAGTTGAACATGTTGAACATATGTAACAT
ATGTGGGCTCATGTTGGCAACCAATAGATTTATCTTCTTTTATTCGTTTGGAAAACTATG
TGAAAACTATGTTATGTTTATTTGGCTTGTAAAACCATGCTATTTTCGGTTCAAATTATG
TTATTTGATTCAAACTATAAAAATCATGCAAAAATAAGACGGCCAGCCGGCCACGCGGGC
ACATATGGGTCGACACGTTGTACGCACTGCCGATCCATATCTAAAACAGGGCAGATGCTG
AGCGGACAACCGACCCAAACGGACAAAAAATGAACGAAATCGCTGTCCGTTTGGGTCGGC
CCGTTGGAGTTGCTATTACGGTCCATGTATTTTTGTTGTCTAATTCATCAAAGATGCGCC
AGATCTGCTAGTGGAGCCGGAGAATGTTTTTTTTTTTCCTTTTCCGTGGGATGTTTATAC
GACAATTTTGGAGAAGGGAATGTAAGAAAGAAAGCAAAGCATACAGAAGTGAGCGGCAGT
CGCTGTGTACCAATGAAAATCAATACACACGACTGACGTCTAGAGTACATCTCGCGCGAG
TCGTGATGGCATGGAATGGAACACCGGTAGCGGTAGGTGCAAGGCCGAACGTGTAACATG
GCGGTTCATTCGACGCATGAGGTGAAAAATCGTCGAGAGGCGTGGCTCCTACCACCCTGC
GTTTTTACCAGCTAGTTCCGTCCGGGCAAGACGGTGATGGTTTGTACTACTAGACTATAG
ATGTCTCATGTCTCTTCCGCCGTGCCACGGTCGCGTGCTGGCATAATGTGAACGGCATCT
GCGAATTCGCATCCCCCGGCCGCCCGTTCACAACCGGTTCCGTTTATCCGATGGCCGCGC
CGGAAAACCGCCCCGTTTTATTCTGGCCGGGGAGCGCCGGGCGTGTGGATGAGGCGCGCG
CGGCCCGTATCCGGCCACCCGACCCCCGGAGCAAGGCAGAGCACACGTACGCCCACGCCC
ACGCCCACGCCCACGATCCAAACCCCAGAAGCGTCGATCCGGCACGGGGACAAGACCTCT
GCGGTCCTCTCGTTCCCGCTATAAAACTTCCGGCGCCGCACGGCGAGGCTCGCCTTTTAG
TCGTCGTCGTCGTCGTCATTCCGCGCGCGCACCGCCGAGCCCGTCCTTCGCCATGGACCC
CTACAAGGTGCGTGCTCTGCTCTGGTAGCTCGCGCCTCGTGCTGTGCTGTGCTGGTTCAT
CATGGCTTTGGTTTTGGTTTCGGTTTTGATGATGGCGGGTTCTGTGCTTGTGTGGTGCAG
CACCGCCCGTCCAGCTCCTTCAACTCCCCGATGTGGAGCACCAACTCCGGCGCGCCCGTC
TGGAACAACGACAACTCCCTCACCGTCGGATCCCGAGGTACTCCTCCTCCACAGTCCACA
CACCTCTGCTCACCACGCTTTAGCTAGCTATACTTCCTCTCTACCTAAATAAAATAGACT
CATGTTCATAGCACCGTAGCAATCAATAAGTACGTACGTACGTACGTATGTCCAGTATTG
ATACCGCCGGAAATGCAACTTGCTACTTGCAACTTGCTTAATCTTAGGCCAATCCTCCAG
TGGATTTGAGCATCCTGAGTGATTATTAGTCTCTTCCCGGGGATTTTTTTTTTCTTTCTC
TCTCTCTCTCTTTTTTGAAATAAAAAGGTGTTTCCCACCAGCCACAACTTCCATCAAGCA
GAGTCCAAAATCAGCCACATCAACTCCGTTGCACAGCGCCCAGCCACAAACTGGGCCAAA
CAACTGCCAAAGATTATCAAGAGTGACTAGCTTACTTCATGTTTGGGTATGGTGACTGCC
GTAATAATACCTATCATTCAAAAACTGAAGTCCTTTAATTAACCATCCCATCCCCTGCTC
TGTCCGTCCGTGTAAAGTACAGTAGGTTGCTCTTTGTAAACTCTGCAACATTGTGCCATG
CTCTCAGCGCCGTTTTAGTGTTCACTAGTAGAATTTGATCATAAATCTACAAAGATAGTT
TTCTCCTGGCACACGTTTTGGCAGGCTAGAGTCGTAACCCATCCAACAAAGAAAAGAATT
TGGTTTTTGTGGAAGTTCAGAGCCAACTTCAAGTGATTTGGGTGCTTCTTTCCCTGCAAA
ATAAATAAATAGAAATGAATGAAATGATTTGGGGTTCTTGGGTAGAATAATTCGGGGTGC
ATGAGTCATTCATGGTGAAAGAAAGAGATTATTATATAGAGTAGAGTAGGAGATTAAGAT
GGATCGAGAGAGAAGTCACGTGGCGGTGGCATGCATTATGAATTATGAACCGATCGAGTG
TTTAGTTGTGGAGGCAACTAACTAGGATGGAATTCAGGTCCGATCCTGCTGGAGGACTAC
CACCTGGTTGAGAAGATCGCCGACTTCGACCGCGAGCGCATCCCGGAGCGGGTGGTGCAC
GCCCGTGGCGCGAGCGCCAAGGGCTTCTTCGAGGTGACCCACGACGTGTCCCACCTGACC
TGCGCCGACTTCCTCCGCGCGCCGGGCGTGCAGACCCCCGTCATCGTGCGCTTCTCCACC
GTGATCCACGAGCGCGGCTCCCCGGAGACGCTCCGCGACCCGCGCGGCTTCGCCATCAAG
TTCTACACCCGGGAGGGCAACTGGGACCTTGTCGGCAACAACTTCCCCGTCTTCTTCATC
CGCGACGGCATGAAGTTCCCGGACATGGTGCACGCGCTCAAGCCCAACCCCAAGACCCAC
ATCCAGGAGAACTGGCGCGTCCTCGACTTCTTCTCCCACCACCCGGAGTCGCTCCACATG
TTCACCTTCCTCTTCGACGACATCGGCGTGCCCGCCGACTACCGCCACATGGACGGCTCC
GGCGTCAACACCTACACCCTCGTCAACCGCGCCGGCAAGGCGCACTACGTCAAGTTCCAC
TGGAAGCCCACCTGCGGCGTCAAGTCCCTCCTCGAGGACGAGGCCGTCACCGTCGGCGGC
ACCAACCACAGCCACGCCACCAAGGACCTCACCGACTCCATCGCCGCCGGAAACTACCCG
GAGTGGACCTTCTACATCCAGACCATCGACCCGGACCACGAGGACCGCTTCGACTTCGAC
CCGCTTGACGTGACCAAGACGTGGCCAGAGGACGTGGTGCCGCTGCAGCCCGTGGGCAGG
CTCGTCCTCAACCGCAACATCGACAACTTCTTCGCCGAGAACGAGCAGCTGGCCTTCTGC
CCCGGGATCATCGTCCCCGGGGTCTACTACTCCGACGACAAGCTGCTGCAGACCAGGATC
TTCTCCTACTCCGACACGCAGCGCCACCGCCTCGGGCCAAACTACCTGCTGCTGCCGGCC
AACGCGCCCAAGTGCTCCCACCACAACAACCACTACGACGGACTCATGAACTTCATGCAC
CGCGACGAGGAGGTCGACTACTTCCCCTCCAGGTTCGACCCCGCCAAGCACGCGCCCCGC
TACCCCATCCCGGCGCGCGCGCTCAACGGCCGCCGCGAGAAGGCATGCATTGACAAGGAG
AACAACTTCAAGCAGCCAGGGGAGAGGTATCGCTCCATGGACCCGGCAAGGTGACTACTA
ATACTCCGTACCAACCTATTGTATCAACCAACCAACATATATATATGGAGTATATAGCTA
GCGATTGTTCTAAAACTGAAGGATGTATATATGTGCAGGCAAGAGCGATTCATCAACAGA
TGGATCGATGCGCTGTCCGACCCCCGCCTCACCCACGAGATCAAGGCCATCTGGCTCTCC
TACTGGTCTCAGGTAATCAAACATAGCGGGCACTGCATATATTCTTACATATGTGCACCA
CATACATATGCATCTTCTCTCTGAAATGAATAAGTTTATGTGCAATTTTTTCCATCTTCT
CTGAAGAATATACTAGTAATTAAGACACCATACTGAATTGCTTCTTGTGGGATCGTGCAG
GCTGACAAGTCTCTTGGCCAGAAGCTTGCGAGCCGTCTCAGCGCGAAGCCGAGCATGTAA
TCACCAGTCCTCAATGGCGCACGTACTACGTGAGCAAATCAGATATCTGCTTCGGTCGTG
GAAGCATGCATGCATGCATGCATGCATTCTTCCCTCTTATCGGCAAAGGATTAATTTAAG
TACCAAATGCTACATCAGCTACTTCATTTTACCGAGCCTATTTTGCAAAACAAGGACATA
CGTACGATTCTACACCACATTATGCGCATTGTCGTCTGTCATTCATGTAATAATGTGTAC
AAGAGCCCGTCTATCCTCATACTTCATGATTATTGTAAGGTGAATGCATCTTGAATAATG
AACCAAATTACGAATAAGTTGAATAGTAAGGCCCTGTTTGGAACCATAANAGATTATGAT
AATCTGGATTATGAATATAAATTATATATTCTGGTTTATAAAAATAATTTAGGTGGACAT
GTTTGGAGGCCAGATTATATAAACTGTAATCCAGGTCTTACATTGCATAATGACCTGTCT
GTCCTCTTTTTTTTTTTTAAAAAGAGGAGGATGGCAGTGATAGGAATGTAATTATCACCA
ACTTTACAAGGGTAATGGGTCANNNNCAATCCATAATCTGATTTTAGCTGATGTAGAGTA
GATTATGAGTTTTTAANNNNNNNNNNNNNNNNNNNTTATAATCTACATCATAATCTGTCC
TGTTTGAA