| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
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Predicted Genes from contig_71748
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_76534 |
2 |
2372 bp |
None |
Available |
Available |
LOC_Os01g51060.1, FRAME:+3, EVALUE:3e-135, 13101.m05319 protein hydrolase, putative, expressed |
CDS Structure of MLOC_76534
Contig Sequence (7039 bp)
>contig_71748 7039 assembly3_WGSMorex_rbca.fasta
GGCCGGCCCAGTCCAAGATTTTTTCGCTTTGTGAAACATTTTCTATTATTTACCGGTGAC
ATGGTGCGTAATTTATGCAAACTTTAGGGATAATTTGTAAGACGGTAAACCGAATTTGCT
TTATTATTAGGGAGAGACTAGGGAGAGATTATGGTATTTATATTTAACAATATTTTTTCC
ACTCAAAATCGACTAAGTTTTTGGTATCTTCTTTCTTTTCTTTTTTTGAGAGGAAGGTAT
CTTTTTTCTTAATCAAAGAGTAAACCACTTGTTGGCCCGTTATAAAAATTGACCGGCCAA
AATTTGAATTTCACGCGACTGACTATCAGTTGATCCCAAGCATCGTAAACAAATTTAGCA
GGACCTGTACGAAGTTTTCTAACAAAGCGAGCCTTATTTCTAGTCTTCCAAATTGTCAAG
CATACTGTTGCTCCCCACCGAGCAACAAATTCTGCTGAGACTCAGGAAATGAGTCAATCC
CAGTCTCAAACATATCATCAATGGTAACGGGGCGCTCTGTGGTTGTACCAGGGGACGGTG
ATCCTTCTTTTCCAGCCGGGGGAGGAGGTCGGCACCGGGGCCAAGAAGATGGTGGAGGCT
GGCGCCGTGAACAATGTCGAGGCCATCTTCGGGTTCCACGTGACCGTGATTCTCCCTACC
GGCGTGGTTGGGTCGAGGGCCGGGCCGCTGCTGGCCGGATGCGGCTTCTTCGAAGCGGTG
ATCACCGGCAAGGGCGGCCACGCCGCCATCCCCCAGAGCAGCGTGGACCCCGTCGTGGCC
GCCTCCAGCGTCGTCCTCGCCCTCCAGAACCTCGTCTCCCGGGAGGCCGATCCCCTCGAC
TCCCAGGTAAGCACTACGCACGCGACGGGACCAGCTTTGTTGCTCCCTCGTGACGGCAAT
GGCAATATGGTATCATCTCCGACTGAGACGTGTTACCGTGGTCGCAGGTCGTGACGGTGA
CGAGGTTCCGGGGAGGCGGCGCGTTCAACGTGATCCCGGACTCCGTCACGATCGGCGGCA
CTTTCCGGTGCTTCTCGAACGACGGGTTCATGCGGCTGAAGCGGCGGATCGAGGAGGTGA
TCGTGGCGCAGTCGGCAGTGCACCGGTGCGCGGCGGCGGTGGACTTCCACGCGGGCGGGC
GGCCCCTGCTGGCCCCGACCATCAACAGCCCTGCGCTGCACGCGCACTTCGAGGCCGTCG
CCACGGAGATGGTCGGCGCCGCCGGCGTCCGGGGCGCCATGGAGCCGTGCATGGGGAGCG
AGGACTTCGCCGCCTTCTCCGAGGCCGTGCCGGGCTCCCACTTCTACTTCGTCGGCATAC
GGAGCGACGCGGCCGGGTCGGTGCACGACGCGCACTCGCCTCATTTCCTCGTCGACGAAG
GCGCGCTCCCGTACGGCGCCGCCATGCACGCCAGCCTCGCCATGACGTACCTGCAGCAGC
GCCGGCACGGCGGCGCTCACGATCGCGTGGGCTCGCACCAGGAGCTGTAGCTACGTACGC
GATGTTGCTGCTGGATGCAGCATGCGACGAGCTGCGATGCGACCTCGGACGGGCGAGGGC
TGCGCGCGCGCGCGCTCGGCGGCTCGAAGAAGCCAAGCTACTGCGGCGATTATCACCGTC
GACTACTCTCGTCGGGATTCTGTTGGGACGCAGAAAAGACGTGCTCCTAGCAACGCTGAG
TGGTTGATTTTGCTGTCCAACGCGCCCGATTAAAAAACTGGTCAACTTCGTGGATGCGAG
AAAAAGAAGGGGAGATGCCATGCATGATGGGTCGCATCACGGGACGGGATCACACGTTCA
TGTCGATAATCGTTTTCTTCCGAAACTTTGAAATCCGTCGACATTCTTTTTCTTGATTAG
ATGTCCAGAATGGGTTGGCTTCACGAGATTCACAAAGTTAAACAAGCCAAACTACAAAGA
TGAAATCATAGGGGGTGCCAGAACAGAGAACATGATTACTTGATTAGCAAAGGAAATTCA
TATCTGAATCAATACAAATAGACGGGTAGCACAGGAAAAGAAAAAAACACATCCAACACT
AGCAGCATCGAAGACATGTTCTAAGTACACGTAGTAAGACTAGGAAGGATGTAAACAAGG
CGAAGATCACGCACGAAGAGCCTAAAATCCGCCATGGAGCGAGCCTGTGGACACGCGCGG
CACCTGCGAACTCGGCCAACCCAGTCAGTGGCGCATGCTGCCAAGGAGGAATGCCACGGC
CGGGCAGAGCACGGCGGCAACGAGCGACGAGGAGACAGCCGCGGCACCGGAAGTCGGGCT
CGGCGCGGGCTCGTCGGCGGCCAGAGCGGCCCCGGCGAAGCAAGAAGCGGCGACGGCCGC
GATGACGACGGCGCGGGAGATCTTGGAGGCCATGATCCTAGCCGCGAGAAAGAAAAATGT
CGCGGATGCGGCCGTGTCTGTCACAACAGCTCGAGCAAGGGCTGTGGTGGAGGAGGCGAG
TGTGTGTGCGAGCGAGATAATGCCGTGGGGACTCAGGACGGAGCGCGCGTTTTTATAGCC
GACGATGAAGAAGATAGGGGCTGGGGGAATGGGGTGCCCTGCATTTTACAGTCTGGCTAG
CCGTCCGGCATCGTCGAAACAGCCTGCTCACGATCGGCGGCTGGTAGGAGTAGGACCAGC
GAATGCCTTTGCTCCTGCCCACCAGAAGCAACGCATGCACTTTGCCTTCTGCGAGAAAAC
CAAAACATGACCCTGTTAGCCTGTCTCGTCCCCGCGTTTTTGCAAGAGAGTGAGACTTGT
CACACATGCAGTCCATGTAGTAATTTCATAGACATCAACACTGTCTGGAAGCGACATCAG
CACGAATGTACTGCATGGAAACCGAACCAACAAATGTACTGCGCTTACAGCAAGGTTTGT
GCCGAAAACATGAGTTTGGATTTGAATTCCATGGAAACCAGCTGGAAGGTAGGAGTGGCA
GTGGCGCTAATCAGTTGGAGTAGCGGGAGATTTCAGCCACCTCGAGAATCTTTGGTGACA
GCGGCGCATGGCCCCCCAGGTAACAGCGGAAGTGTGGTGGGAGTGTCGCGCGGATCGGAT
GTGTTGATCGGGTGTCCAGTCCTGGAAGGAAGCAGCCAGCGCAATCATTCGTCCATCCCA
GAACAAGCGCTCATCAAGAAGAAGACGAGCGTGTCAAAACGTCAGGCCACAAGTTGGCAT
CACTGCAGAGGTTTACTTGAAGCCACGGTTGCTTTTGGTTTACTTGTGACCAACCATCAC
AACATAGCTGCTGCTGCTGTTGCTAGTTCGCAAGTTCGTCAGACCATGCCATGCCTAACA
CCACGAAGATGATGCTTTATTGGCGTCGCTCTAGTTCACGGTTCTCGTAAACTACTCTAT
CACAACCGAAATCCAAACTGGACATGGAATACAACTGATTTTTGTCTTCTGTTGTGCCGC
GAATTAGAGTCTTCCTTGTGGTCATTTCCTGCAAGGTTTTGTTATCGATCTGTTTGCTAC
CGGTAGGCGGGGTACCTAAGATTCTTCGAAAGCGGTTCTGCTATAGCATTGATTACACGG
CGCAGGAGGGGGTTTCTTATCTCCGATACCTCTCCGGCGCAGCCGGCGGGTTTGTCTTTT
GTTTGGCATTATGCCTGCAAATTCGGATGTCCTTGATTCAAAGTAAGAGCATCTACAGTA
GACTTGATAAATCCAACCTTTCAAACGCCCGCGGTCATGGATCAGTCACGATTAAAATAA
TGCATTCTATAACCGGATATTTTATATTAAAAACCTCAAATCAATATTATTGTGTGTAAG
GTAAATCTAATACTAAACGGAGCTCGTTCGGTTTCACCGTACCATGTCCAACGGCTTGCT
ACGCTCCTCGTAGTTTTGATCCGTCTTTAGTGAGGTAGAATAGGACATGGGACACTAGCT
GGCCCACGGGAGTCGAACCCCCGACATCTCCGATGCCCTACACTTTCTCGTCCGAACCCG
TAAAATGGATGGTCCCGACGAACGTCACGTCGATGACGGGTCCTTCCTGGAAAGAGATGA
CGTCCACGATGCGGTTGCGGCGTGCACACTGGTGCACCATACAGAGCGCCGGAGAGTGTG
ACTCCGCCTCTCCAACATCCACCGTCGCGAGGGCCTCCGACGTCTCCCGTGCTCGCTGTC
TCGCACGACTGGCACGCTGTGCCATGTTAGCGTCCGGGAACACCCATGGTGAGTCCACGA
CGCGCCAACAGAGAGGTTGTGCATCCGCCACTATGAGGCAGCGACGCCGGATCCAAGCAC
CAGTTGTGCCAACACAATGGATTCCTGACGTTGCGAGTCCGAAAGCTGTTGTCGGGCGGC
CAACACCCGAGAGCGGTTCAACGCAAGCCAGATGGTCATCTCCTTCTCGGGGCCGCATGG
GATGAGCTCGTGGTCTACGGATATGGAGGTGAAGGACTCGTGTCTGCTGCTCGCCATGCC
GAAGAAGGCCAGAGATTGCCGGATGAGGGCTTGGATTGACGGATGGGAGTGGAGTGAAAC
GGCTAAGGTATGGTCCGGCGAGCGGATGTGGGCGAATATATGTGGGGCTGATACGGGCGA
GCATGATCCACGCCGACGTCGCAGGCGTGCCCGGGTGCCCCCATATCCGCCCCATATTTG
GGCTGGATATGAGGAGTGTCGGTCTGCCCAACCGTTTGAGGCGTTCGACTGACTGGAAAT
TTTGTGAACGGTCAGCGACCGGGCGGCCCGCCCGGGCGTTTGGGACGGGTATGAGGGTCC
GATAGTAGATGCTCTAAGTGATCTTTTATTTGTATTCGCTCGCAAAATGCTTGAGACTAG
GTAATATACGCCAATCATATGATTCATCGCCAATTGAAGGGATCGATACAGTCGACTAGG
TGGGGGGGGGGGTTGAATAGAGGACTACAAATTTTAATTTTGTTTATCAATTTTAGGGAT
AAACGGATAAATAGGGTTCACTGGATATGCAACTAGGTGAACACAAACTATATGGCAAAC
ACAAGTTGTACTAAATATGTGAGGCAACAAGTTAATTAACAAGCCTACAACCATATAAAG
CAAAGTAAAGTGCGGGAAAGGATTAACCACAAGTGAGAGGAGGACACGGATTTTACCCCG
AAGTTCACTCTTCCTTGGGGAAGAGCTACTCTCCGTTTAGAGCGGTGTCGGAGGCTAAGC
TTGAGGAACGCCATGAAAGCTCACTATATCTCTTTCGAGTCAACCCTAATGGATGAGACT
CGAATCACTCGGGGTTGGTCTGGAAGGCGACCACCACACCTTTACAAACTTCTCCAGAGC
ACACCACAAGTAAGGAAGCTTTCGGAGGAACCTCTAACCGCCTAGGAGCCCAGGATTCAA
GAGTAACAAGTCAATTGTGAACAAATGTTGTGGGGAACACGAATTTGGTTTGGTCAAAGT
GTAGATCGGGTATTGCTCTCCCGATCCCCAAAGTATGAACAAGTTTGGGTGGAGGGATTA
AGAGTATTGAGAAAAGTGTGGTGTAGCAATGGTGGAGCTCAACAAGACATTAGGGTTAGG
GATGGAGGAGGAAGAATGGGTCCTTTTATAGTGTTCTTGGCTCGATGGACATTTCTGCTT
GTTGGCCCCCGTGCGTAGAGTGTACTCAGAGACTTAACACCCACCCCGTGTGCACGAGGG
TCAAAAGACCCCGTGCGCACGGGGTACTCATAGAGTTTTGGGGTATCCCGTGCGCAAATG
GGTCAAAAGATCCCGTGCGCATGGGGTATTCATAGAGTTTCCGGGTACCCTGTGTGCATG
GGGGTCTTGACCCCCGTGCACACGGGGTGCTCAGAAAGTCGTTGTAAAACTAGCTGAGTA
CCCGGGGACGACACAAAAAAGGTATATGAGGATGGTAGAAGTGGTAGGAAGGCTGGTGTA
TATGTTTTGGAGGCCTTCCCACACAACAACAAACCACGAAGACCCCTCTTAATAGTGTGG
TATTTCCTATGACTCAAATCGAACCAAAAACGAAATCCTAAGAGTCGTTGAAAAGATCAT
GCCGTTGACCTTTTTGAATTGGGGGAGTCACACACCTTCAGCGAGAACTTCATGGGACCA
ATATCCTCGGGTAAAACTTTAGAATTTGATATTAGTTCCTCTAACCATATTGTCATCACA
CCAAAATACAATTAGGTGCCACATGCACTTCCAATCTCCCCCTTTTTGGTGCATTGATGA
CAACATGGTTAGAACATGGCATTAAGATACATCAAATGGAAAAGCCATGAGAAAGACAAC
TATTGATCACGAAATCTCCCCTACATGTGTACATGAGATGAACAATACATGCTTGAGAAT
GCAACACACACATATATAAGAGGGCCCCCTAGATCAATAATGTCAAGAACATGTGATCGA
CCATAAATAATCTACACGGTGCCTAGATCACATGCAAGGAGTGTGGTGAGTAAGGAGGGT
GATACATAATAAATAATACCATGATCATACGCTAAAAGATGAACAGTAGATAAGCATAGA
TGATCCATAATCCACATAGTATCACACATAGATAAATAATAGAGTAGCTCACTCACCCAC
CACAAAATGCAAGTAAGAGTATCTCAAGCCAAATAAACACCATAACGAAACAACAAGGCC
TTGAGATCTCATAAACTCACTCAGAAACTCCTAAATCACATCTCCCCCTTTGTCATGAAG
ACAACCAAAAGGGGAAAAGGCGATGCAAATGAAAAACACTAGACAAGAGGAGGCGCAAAG
TGCCATCGTGGCATCGAGAAGGAACGTGATGTGGCCCTACTGTCATTGTCCTTAGACCCT
GGACTGACCTCCTCTCCTACAACAACACGCTCAACCTTCTTGTGACGCCTCTCAAGCTTC
CCCCTGTTAGTTTCCTTGACCTGATGGTGCTGAATAGAATGACACATCATGAACATGTTG
CACATGGTCTTGAACATGGACTTCTTATCATCTCTAGTGAAACTGGCCTCACAACTCTTC
TTGCCACGACCACACAAAATCCATGCAGTGGAGGAACACCTAGGAGTGAAGGTAGCACGT
GTTGGGTAACGTAGCATAA
