morexGenes - Barley RNA-seq Database

Contig contig_7135

Source Contig contig_7135

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_7135 (2989 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
No map location		No map location

Predicted Genes from contig_7135

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76432	3	1320 bp	AK355851	Available	Available	None

CDS Structure of MLOC_76432

Contig Sequence (2989 bp)

>contig_7135 2989 assembly3_WGSMorex_rbca.fasta
GGTACATGATGGTAGGTGTTTCTCAGGTACCGATTAATAAGTGACAAATGCAAGGGGTTG
TAGGTAAAACGACCCACCCTGACCCACCCTGTCCATTTGGCGTTGTGATTGGCTGTGGAC
TAAAACTGCACAAGAGGTGCAAGTTCTAGGATGAAATAGATGCAGTTTGCTACTTTTAGG
ATCAAACCATCACATTGCATGCAAGTTCTAGTATCTCCAGTGCTATTACCTCCAATCATA
TCATAATCTTGTTGATTGAGAGGAAAATTGTGGGGAATCGGAGCAAAACAATGGGTAAAT
ACGGTCAATAACTTTTACTCAGGCATATGAATACTTTAAAACACCCACAAACATGATAAT
TCGATCTTCCCAAAAATCAAGAATTCATTGGCCCCCGGCTCGGAGACGTTGGCAATATGT
GCAGTTCTGCAACTCTTTGCAGGTTGTTCCATGATTCACGGGGTGCGTAGCTGACAAGAC
ATAATGCTCTCGCATTACTTCTACTATTACTACTCCCTCCGTTCATGTTTTCGATATTAC
TATAATATGAACTGCATACAGACTTAAATGAGTGAATAAACATACTGAAATGCGTCTATA
TGATTTTGAATGAAAAAAAAAGAGAACATTTTATAATTTTGAACAAAGAGAGAGAGAGGG
GGTAATTCCTAAAACAACGTGGAAAATAGATAGGTCCCGCAGATTTATAATGATAGGATC
GATTCATATTAATTTAGTACAACTAAATACAAAGTTGTACTGAATCAACAACAATTAATA
GGCAAATGTTTGTGGCTGATGCGTCGGCTGAAGATTAGGTCGGTCGTACGCTATCACACG
CTCCCATTTCTCTCGTTTCCAACACTGCGGCGGCGAGTGGTGACGGCGCGCGTCCCCGAA
GATGCCTTCTACTACCCTCGCATAGGTGGGGAGCAGCGAGCAACCCCGGTCGCGACGGCG
AGCAGCATCGGCAGCGACAGCGAGCGGTGACGGTAACCGGCCCTGGCGAATGGGACCAGC
ACCGACGAGATTGCCCCCGCGCGCATGACCACCTCTTTTCCCGTCTTCGACGGACGAGCT
GCATAACTGTGACGGCGAGGCACACCCACAACACAAGGATGCTGAAACCAACATCGATTT
TTGCTACATGCTTCAACCGCCATCACAGTTTGCTACAACCGGCATCGCTATCTGCTACCA
CCGGTGCCGCATTTTGCTACATCACACATGGCTTCACGATTTTTCCTACAATCGGCAACG
AAAAAAGCTACATCCGGCGACATGATTTGTTGCACCGGCCACGACAAAGTTTATAGCGAC
GACAAAAAAAGCTACCACCAGCCATCAATTTTGCTACAACCGGCAACAAACATGTTGCAC
CGGCCACGACAAAGTTTATAGGGACTACGGCGGCGCTGCAACCGACGACAGAAAAAGCTA
CCACAAGCCATCAATTTTGCTACAACCGGCAACAAAAAAAGTTACGGCAGAAAAAGCTAT
CACAATTTTGCTACAACCATGTCTCTGGATGCGCAGTGGCCGTCAGTCGTGGACGAGCGC
GAGATGCAGAGGCTAGGTAGTAGAAAAATCCACCATTAGGCAGGTGAACAGAAACTACAA
AGATATCCATCAAAATACACGCAAATAGAAGCCATGTAGTTAGATTATCGCAAAATCAAA
TCTACCTCAAAGAAACTTCATCTCAACACCATTACCCTCACAACTTAGGAGGCACTATGG
AGCCAAATTTATGGTTCAATTGTACGATCAGATGGAACATTCATATAGCTTAAGAAAAAC
GCAAACAGGGACAGCAACAAATACACACAGTTTGATAATATAAGGTAGATTTCACTGCGT
CTTAGATTGTACCAAAAACTCAAAGCAATTCAACATTCTTGTGGCACAAGTGCCAAAGTG
CCTCGCTGAACATAATGAACGTCAATATAACAGCAACATCTCAGTCTACTGGACTAGAAA
ACAGGCAGGTAACACAGGAGGTAAATCAGGTGTTTGTGGCCCTGGTGAAGATCTGCTGGC
TGGAGTGGATTGACACCATCCTGATGAGCCCCCTCTCCATCAGGTCCTTGATAGCCCTGC
GAGCCAGAGACCCGTTGATCTGCAGGTAGTAGGAAGACACAGGGTGAGTAATAAGATCAT
CAGGATTATTGTGCACAGTTGAAAATGCCAAAAAGAGTTCAGATTGTTAAACTGAGAACA
GTCACAAATTTGATGCACAGATACGTGCAAGCAAGGTTTTCAAGTCGAGTTGTTCAGGGG
TACCGACTCCAGACCAGTCATGCCTAGCAGTCAGCTGTTTGAGTCGATATCCAGTTCCAA
CTCATCAACTCAACTACTAGATATCTGACTCGAAAATAGCGCATGCAAGGGTAAATAGCC
AACACAAGTTGCAGTGCTCGTATCAATCGGTGGTTCTAACATACAGTTCGAGGCATGCCA
GGCACAAATTGAGGACATCAAGATGCAGGGACAAGTTAATTAAGCGTTCAGCAGCATCAA
TGGTGATGTTGATAAAAATACAATTATCACAGTGCATGTCCAAATCAGAATATGCAATAT
CCAAGACAATACCACATAATTTTCTCAACAGTTGGGCACATCAGATCAAATTAAATACAT
CCTAGTTATAACTTGGCAAAAATCTGAGGCTGCCAGCCTCATGCACCGAACTGAATATCA
CACTGCACAAAAACCATCAGCACAGATGCAGCAGTCAAAACCGTCATCCAATAGGATGTG
TAATCAGTTCATCACACAAATCGTAGATGATGATGCTATATCTTAGAGCGCGGGTATGTG
TTCAGGCTCATGATCAGAGTACTACTGACTGACCCCAAAACAGAGCATCAAAGTAGAACA
CTTCATACACATATCCAGAGCATCGCGAGATCTCAATTCTCATGGTATGAAGGCAAACAG
GAAGAACAGATCCAGAGGGAGGCCGGTGGCGTTACCCTGAGTCGCTCGG