Contig Data
morexGenes
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Map Locations of contig_7123 (5617 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_7123

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76394 6 1848 bp MLOC_76394.3 Available Available LOC_Os08g37180.1, FRAME:+3, EVALUE:0.0, 13108.m03909 protein patatin, putative, expressed





CDS Structure of MLOC_76394






Contig Sequence (5617 bp)

>contig_7123 5617 assembly3_WGSMorex_rbca.fasta
GCGGGGGCGGCGGTGACGGCCCACTCGCGGGGGCGTGTGCGGCGGCGAGCGGCTGTGCGA
GAGGAGCAGGGAGTGCGGGGATGGGGGGTCGTGGGTCACCGAGGGTACGAGTACGAGGAG
GGTGGGGGTGGGGGATCGTATGGTTTTTTTTCTTTCTTGCAAGGTGGGATTGATCGCTGG
GAGGTCGAACCATCGCGGAGGTTGAACCATCACGACGGCGCATCCTGCTTTAATAGTAGA
GATATTGTATTGTTTAGGTATATAAAAAACCTTTTTTATATCAAAAACATTGGAGTGGAT
GAGATCGGAATCGGAAAAGTTGATAGAGCGAGAGAGGGTGAGCTTGGGTTCGGAGCAAGG
CGTCCGGAGTGGGGTTTTTGTGGGACAACAATGGTGGCGGTGGTGGTCGGGCCTGTCAGC
TAGGATGTGGCGGACACGTCCGGGCTTGACTGGACCGCACCGTATCCACACTAGATTTGG
GTTCGATATGAGGGGTGTCGGTGAGCCCATGCGTTTGAGGCAGGTTTAGAGGTCACGTTG
GGTCGCGTTTTCATGACCGGTCATTGACCGGACGACCTGCCCAGTCGTTTGAAATAGGTA
TGTGGGGTCCGGTTGTAGATGCTCTAACCTCATACGCTTACCCAAATATGAACCAACTAC
AAGTTCATTATAGGCCTAAGAAAAAAGTCAATACCCTACTTTCTTGCAATCCAGGCGGAT
TCCTCTGTTCAAGTACATACCATGATTTTGTAAAAAGTTGAAGACACGCGCGTGTTGCAA
AAAAAAACAGAGTATCAATTCTTTTTTTCCTTTCTCGAATACCAATTACTTTATATCCTA
ACAATTATAGACTTAAATTAGATGGGCGCCGTAATGCGCGTCATCATCGATCTAGTCTTT
CTTTAGAGATGGAGTACTTTCTATGGATGAGATGCACCAAGTCACCAATCTTTTAGCCGG
CTTGGTGGCAGGGTGTTACCGTACCCTCTGCCTTTGATAGTGTAAATTATTTTTCACTTA
GAAAATCATTAAAAACAATCCAACACCAAAACATATGGCGCTAACATAGACAAATTCAGC
GCTAGAAAGATTGACGTTAAGATTTGGATAAAATTCATGTGGGTAATATTTTGCTCAATT
TTGTAGAAATGATCGATCTTATCAGCTTCGATCGTGGCTCCATGTTACAGTCCGTAGGCA
ACGTTGCTCGGAGAATAGGCGTGTGCAGCAACATCAGCTGTTGAAACTGAAGAAGGTGTG
GCTGTTACTAAACGTGGTTGCTACTAGGCCTGACGAAACTTAAGAAGAGGAAGAGTGTGC
TACTTAGAACGGCGACATAAACACAAGAAGAAAGGCAAGTGGTCGTGTGAGCTTCTGAAT
TTCGTTCTCTTTTCATTAAAATACCATTTGTTATGGAAAGAGGAGAACGTGTAAAATATC
ATATCGTGTTGTGTGAGTGCCGATTGTGATCAAAACTTTGTGTAACCAAAGTAGGTCACT
TTTTGTTTGACAGGATTAAAAATGGGTAATGAATTGTGACTTGTTAGGGGGAGGGGCACG
GTGTTTCTTATTGTTGGAATTAAGTGGACTCGTTCACATGAAGCAAATCTTGTTGCCATG
TGTCATGTAATCATGATGGAACCCAATCATTATGCGGATATGTGGTAAGTGTCTCGTCTT
ATAACCCGATCCATTTACAAAGTTTATGTGTGCACTATACTCCATTCGTTTCTAAATATA
ACCTTTTTTTAGAGGTATCACTAAGACAATATATCGAATGTATGTACACATAGTTTAGAG
TATAGATTCATTCATTTTACTTCGTATGTAGTCTTATAGTAAAAACTTTAAAAGGACTTA
TATTTATAAACGAAGGAAGTAGCATCAACGATGCTACACCAACGAATTTCGATTATACAT
ACGTGATATCACTGAATTGTTTTGGTTATAAAAGAGAACCAAAACTCTCTCTTTCTCTCA
ATCCACGTAGAAATATCATCAAGCACGCACGCAAGGTCATGCTCATCCAACATACCAGCT
ACGACAGCAACGGGTTCGAATACCGACGAGATGGAAAAAAATAGCGTGTCGCTTCTCGGT
ACATACGTGTCCGGTTGAGTAAACACGACGACTGAAAAAGGCTAGTGGCAGGCAGGAAGC
ACAGAGGAGTAGGACATGGAATCATGTACCACGACACATTATACTAATCAGCATCACCGT
GTGTGCACGGAGCTTTCCGCGGCTACCGTCAGCTCGATGACGTGCGCCCTGCGCGGTGCC
CGGCCCCCCTCGCCCCTTTATTTCACCTTCACTGACCCCCTCGCGCTTGCACCATGGTTT
GCCGGCGACGACCGCATGCAGAGCGCCCGTGACTCGCACAGTGTCGGCGAGAGCATCCAT
TTAAAGCTAATAATGCATCACCCAGTGCAAGTGCAACAGCTTGAAAAACATTCTGCAAAG
CCAAAGGGATCTCTCTTTCGTAGCGCTAGAGGCTAGAGCGGAAGCATGCCGGTCACGCAG
GCGCCGGGGCGGAGCACGGCCGGGCCAGTGAACGTGGCGCGGCGCGAGCTGAGCAGCCGC
GCGTGGTCGCCGTCGTCGTCGTCGCCCGCCAGCCCGCAGCCGCGCTACGGGAGCATCGTC
ACCGTGCTCAGCATCGACGGCGGCGGCGTCCGTGGGATCATCCCCGGCACCATCCTCGCT
TTCCTCGAGGAGAAGCTCCAGGTGAGTGACCAACCAACCAGGCTTTCCGCCCATGTAATT
CAGGCAATCATCCTGCTTGCATTTGATTTGCACGTATATGCACCATCGGTACAAACCGTC
AACGAGTTGTCGGCCGTGAGTAGGAGCTTGACGGGCCGGACGTGAGGATCGCGGACTACT
TCGACGTGGTCGCCGGGACGAGCACCGGAGGCCTGGTGGCCGCCATGCTCACCGCGCCCA
ACGCCGAGGGCCGCCCGCTCTTCGCCGCCAAGGACGTCAACAAGTTCTACCTCGAGCACT
GCCCGAATATCTTCCCTGCCGTCTGGTGATGAGGATTACATACATGGCCACGGTCGCGGA
ATCAATCTCTAACGAATCTGTGTACTCACTCATGAACTATGTACTCGATCTGTGGTGCAG
CAAAGGACCTCTGGGCTGGCTCAAGAGCATGATGGGGCCCAAGTACAGCGGCCAGCACCT
GCACTCGGTCGTCAAGAAGCTGCTCGGCGACACGACAGTCCATCAGACGCTCAAGAACAT
CATCATCCCCACATTCGACATCAAGCTCCTCCAGCCTACCATCTTCTCAACCTATGATGT
ACGTACGTTGAACAACACAAACAGATCCACGTGCATCTACACAAGTGGCATGTTATCCAC
TTGTTTTCGCTTATCATTATTTTTTATAACTAATACCCCTTGATCAAAAAATAAGTGTCG
TTGATCTAGTATAACTTTGTAATAAAGCTATACAGGATCAACAACTTTTTTTTGGACGGA
GGGAGTAGTATATATGATTGTGTGCATCAAGTGATGCAGTCACCTGAGGTTTATCCTTCT
TTGGGAAACAAAGCTTAATTACGTACATGAAACAAAATCTGTACAGGCCACGAGGGATGT
CTCCAAGAACGCTCTTCTGTCGGATGTCTGCATTAGCACGTCGGCAGCACCGACCTACCT
CCCCGGCCACCATTTCGAGACGAAGGACAAAGACGGCAAGACCCGGGCCTTCAACCTAAT
CGACGGAGGCGTCGTTGCTAACAATCCGGTAACTCGTGCTAACACACTAACAGGACGAGC
AAGCTTGATAGGAGCTCGCTAACACGATTATGATCTGTACTAGCTGACTTCTGTGATACT
AATGTGCTCACTAACTTACATGGACATATGCATGCGCAGACGCTGTTGGCGATGACCCAC
GTTAGCAAGCAGATCCTGATGGGCAACGAGGACTTTGTGCCCATCAAGTCTGCTGATTAC
GGCAAGTTCATGATCCTTTCGCTGGGCACCGGCTCTGCCAAGATCGAAGAGAAGTTTGAT
GCAGCTGAATGCAGCAAGTGGGGCCTCCTGGGGTGGCTCTACAAGAGGGGTTCCACTCCG
ATCATCGATAGCTTCAGCGAGGCCAGTGCCGACCTCGTCGACATCCAAGCATCTGTGCTC
TTTCAGGCCCTGCAGTGCAACAATTGCTATCTCCGGATCCAGCACGACGAGCTCACCGGC
GAAATGGCCTCCGTCGACGTGTCCACATCGAAGAACCTTAACGGGCTCATTGATGTCGGC
AAAGCATTGCTGAAGAGACAAGTATGCAAGGTGAACGTCGAGACGGGCAAGAACGAGCCC
GATCTAAAGAGGGGCACAAACGAGGAGGAACTGGACCGTTTTGCCCGCATGCTGTCGAAA
GAGCGCAAAGCTCGGCAGGTGGCCTACGAACGTAGATAGTATGAATATTTACCCTCGTAT
GTATTTGATGATCTATGCATGTTGGATATTTATGTGGCTTTCATCATGTGTGGAGATGGT
TATTGTCTAATGTGGGATTATTCTTATTTCTTTTTAAGATTCTTATAACTATCAAATGTT
CGGATTTTACCAATAGATCCGAACGAATCCTTACTTCACTCTAGTTATATACATGCATGC
ATTAGACTGACTAATTTTCCTTTCATGTGTACTCCTCCCTCTAATTACATGTATATATGC
ACTAGAAGACAAAAGGCTAATGTCATCGTAGATTTTTTTTTTCAAACTTTAAAATGTCTT
ATAGCTCAAACCGTTGCATCGATTGAAAAACCGTCTTAAAAAAATCCGTCTCGACGATCT
CGTCAAAACTAGATCCCATGTTGATATGTTCTCACGACTTTTTTTACCAATCAGAAAGTT
ACCGCATTGTGCTACTTAAGTTATCACGTCTGTCATAAATATGTTACCATGTTTTTACAC
AGAAGTTACCAGGGCATGTTTTCGACAAACTTTTATCCCGGAGTCAAAAAATGATTATGG
TGTTTACAGTGAGTTATCAGCTTTGTTGTGTATGTTTTTTAATAATTTTCATTCCCTCAA
TAAAAAAAATACCGTGATATTTGTATATGAGTTATCATCTCTCATGTGAGTGTATTATCA
TGTTGTTTACACATCAATTATTTGGGAGGTATTTTTTAACAACACTTTTTCCTGGTCAAA
AAGTTATCACGTCTAGATTGAATAAGTTTGCATGTATATTACCATGTTATTTACACATGA
GTTATCAGGGTATGTTTCTCAACTAACTTTTATCCGAGGTCAAAAGTTACATGGGGTTTG
TAGTGAGTTATCAACTTTATTGTGTGTATAATGCGGTGTTATTTGCACACAAAATGACGG
GAATATGCTCTTTAACAAATCCCCCCCCCCCACACACACACACGTTGACCTAAGTGTCAG
GTATGAAATGCTTCTATTACCATGATATTCATGCAAATGTTATCGAGGTTATATTTTTTC
AACAATATTTCCTCGGGGTCCAAGTTATCATGTATATGATGCGTTATTACCATGATGTTT
ATACAAAAAAATTAGTGCGGTACATTTTTGACAACTTTTTCCTTTAGGTCGAAGTTGTCG
CGGTGTTTGTGCACTCCCCTCCATGTATTTGCAAAAA