Contig Data
morexGenes
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Map Locations of contig_7121 (4956 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012




Predicted Genes from contig_7121

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76388 9 1971 bp MLOC_76388.1 Available Available LOC_Os02g10820.1, FRAME:-3, EVALUE:3e-169, 13102.m01210 protein Sel1 repeat domain containing protein, putative, expressed





CDS Structure of MLOC_76388






Contig Sequence (4956 bp)

>contig_7121 4956 assembly3_WGSMorex_rbca.fasta
ATGTAGAGCCGCCGGTGCACACAGGATCGCCTGCTGCTCCCATTAGCCGGTGACCAGCAG
CAACGGCGTCGACTTGCAGCTCCCGCGTCGGCCTTGTTGCTGTCGTTGTAGCAAAGAGCA
ACGATGTAGAGCCGCCGGTGCACACAGGAACGCCTGCTGCTGAAGGAGAGCCATGTCCGA
GGTGTTTTCTTCTTGCAGCGAGTGAGCAGTTCGAGCAGGGCAACGTAATCTCACCTCTCT
GTGCTCTAGATGATGATGGAGTGTCGTCGGGGCTGCATGGCTGCATGAAGTGCACCGGAG
TTGCAATCAAGCTCTATCGGCCTGTGGTGGAGCTTTCGCACCGTCGGTGTTGCAGTGAAG
CATCGCCTGCTGCTGCAATGGAGTGCCGTCGGGATTGTAGGCTGCAATGAAGCTCCGCCA
GCGCTGCATTGGAGCGTCGCCGATGCTGCAACGGAGCTGTCGATGTTACATTGCAGCTTT
TGTCTCGTCGCTGAGGTTGCAATGGAGCTTCACCAGAGGTCTCGTTGGGGCTGCACTAGA
TGTTTTTTGGACATGGATAGCACTCGGCGCTTGGTGTTGCGCAGATCGGCCGTCCAAAAT
GGTCTGATCGTACGGCTGGCTAGGCGGATGATTTCTCAATGGAGCTTCACCGGAGGTCTT
GCTGGGTCTGCACTGGATGTTTTTTTGACATGGATAGCACTCGAAGGCGCTTGGTGTTGC
ACAGATCAGCCGTCCAGAAAGGTCTGATCGTACAGCTGGCTAGGCGGATGATTTCATCCG
CCTGATCCATAGCAGCCGCCATAGACTTTTCCCAAATAGTGCATTAATAGCAATTTTATT
GTCTGAATTAATCAGACCAACAGTATAATTGTCATGGTAAAGCCAGCAATATAATTGTCG
TAGTATGATAAAATCCTTAGTGGCAAAAAAGGGATCAATTTGTTTGTACGATTCAACCTG
CTAATCTACAAACCAAGTTGACCACAAGTTAGTTTGGCATGAACCCGCTAATCTACAAAC
CAAGTTGACCACAAGTTAGTTTGGCATGAACGCTCCTACAATAGAACAAAGGTTTCTCTC
CACATTCTGAAGGCAGATGAAACATGAAGCTCTGGTAATGTGCAGCAAGAGCATTGCAAC
ATCAATTAATTGCCCAATGCAGTGGTATTCTTTGGCTGGAGGTCATTGCTGAATTTGCTT
TAGCTCTTGGGGCTCTTTTTCGTAATCTCCAAGCCTCTTCAACCACCGTAAACCGAGGTC
AGATCCAGACTCAGCTGCTATCTGGAACTGTTCTTTTGCAAGCTTTACTGGGTCCTGCTG
TATGGTCCTTTTTCGCACCTTCCCAGTTGACGGACTCTTGCCTGAGTTGAACCTGGTAAT
GACTTCAGGCACTTCAGCACCTGAAACAACCACACGGTAAGCATAAACAGATAGGCCTGG
AGTAATCTAACAATTCTAGCCAAAATTAAACAAAATCAGTTAATCAAGAGCTGTCCAAAT
TAATGGTGAAACCATAACTTCACAACCTGTTTATACTCTAAAATAGACAACACGAGAAGA
ATAATATAAGGACATGTCTCTTGAAACGTTAGTGTCACTTGTCTGCAAACCTTTCAGAAG
AAGTGAACCATATGCAACTGCAGCTCCAGCATGTCCCTGAGACGTCAGAAAAACATAAAT
AACAACGTGATTCATGGGTTGAAAGTAAATAAGACAATTTTTAAGTTGATCTATCACATT
TACCACCTTTTCTGAAGCTCTATGGAAACACCACATAGCTGAAGCTATGTCCCTCTTGAC
GCAATCCCCAGTTATATACACAGCACCAAGAAGATACAAAGCAGCAGGATGCAACTGCAT
TCAAAGATAGGTAAAAGCTGAATATGCTTATCAAGAAACAGAGTAGATTATATTTGATCA
ACATTCAGGTGGCGAGCATACCTGGTCAACAGCTTTCTCTATATAATGGAAGGCCTGTTG
ATCAGACTGAACATGATCATTCTACAAGCAACAAAGGTAACCATCAACTGAGATGAAGAC
ATATTCCACACAAATGGTATAAAGAATGAAACTACCATTTGCCTAACAAATAACTAAGAT
CCAATTAATAAAGTGCCCCACAAAAAAAAGGTGGAACAGGACGGGGCAAAAAGCACATGA
AATGTGAAAACCTCGACTCTTAGCCGACATCCAAGTTCATACTGTGCCTCTGGATCACCC
ATGTTTGCAGCTTCAACTAGCAAGGCAGCACCACTGTACACATGAAAAGTGAGAGATGAG
CATAATCCACATGAAATGTGTATTGAAGGCAAGTTTTGCTTCATGTGGAGATAGCGTAAT
AAATGCTCCTACTAAAACACTGCCAAAACAAGGATGATTTTGCTCACTTAATATTTTACA
ATTTAATTGATGGTCAAAGCAGTAAACATCATTCCCAATCTTCTTTTCCAATCAAGCTGC
TAATCTCGTTAATCTTCTGTCCTACTCCCTCCGTTCGGAATTAACTGACGTTGAAATGTG
TGTGTCTAGACACGTTTCAGTGTTAGATACACTCATTTCAGTGTCAGTTAATTCCAAACA
GAGGTAGTGAATACCAATACAGCAATTATTGCCGTAACTAATTGGACACATAATGTTAGT
AACCACAACTCAGGTATATTGTCAGTACCAATTATCTCAAAGTGCCAAGCCCAAGGCATA
TCAGTGGTTTATTAAACATTTTGACCAAGACAATAAAGTTCAACTCCAGTTAGGATTTTG
AAGAAGTCTTGAGTACTTAGAATGGTACCCCCAAAAAGTTCAACTTATTCTTTTCAATTA
GATACCAATGCCCATCAGGCCATTACTCACACTTCCCAAATGCTGCATACACCTTATAGA
CATTAATCGAGATTCATAAGCAAGGCTGTATGACACTCACATGAATTTCTAACTTTGTTG
GGGAAACTAGTATTTCACATGAGCTGCTAAGCACAGCAGCTACATGACTAACAAGACCTA
TACAAGTAGCGGTGACTTGGACATCAACAAAGACACACTCTTATGGCAGATTTCTTCACA
CTGCCTGATATGTAAATATTACCAAAACATTTAACAAGGTATACCTACAGCACTAGGCAA
ATTATATGCAATGTAAAGAAAATTATCCTGCAACTTTAGCTCTGTCAGATAAAACAAACA
TGGTATCATCTGCAACTGATCCGTCAGATAAAACAAATACTAAGAAGCATCGTCCCTGTG
GTCTGATATATCATCCAGAAACAATTCTGGTATGCAACAATCTAACTGAGGCGCAATGGT
ATGCAGTATTCAGATTCATGGCACTTGCATACTAGCCAGGTCACTTGTAAAGGATTCAGA
TTGAGTCAAAACAACAACATAATTACATAAGTAGCGATAAAACTAGTTATTTGCATCGTG
TTTGCAGATTCTTGGAATAACAGTGAAATAACAAAGTAGTGTAGATGCTATATGAGCAGC
TTGAACGACACAGAAAAGTAAGTAAATTACACTAACATCACGGGAGGTAAAATCAACTCA
CATTGCTTTGCAAGCTCCGGGAACATGGTACTTGAAATGCATCTTGGCCAGCCAACATCG
GGCATGAGTATTCATATTGTCGATCTCTAGAGCCAGCTCAAAGTTCTCCTTCGCGCCCTT
TGACACCGAGAAAGATACGCACAACAAAAAGTTAAAACCGCAACAACAGGACACAACAGA
ATGATGCCAAATGAAAGAAGAGAAGGAACACAAATCCAGAGCTGTACCCTGAGAAGTGGG
ATTAATCGCTTGTCGTTGCGGTCGGCGAAGTCGATGACGCGATCGACCTCCTGTAGGGCG
CTCCAGCCCTTGGCCACCAGCTCCATAGCCTTCTTGTTCCGGTCGTGGATCCATCTCTGC
AACCACAAAGAAGTTTATTCACCACCTAGCAACGCACTAGAGCATGAAATCAAATAGATA
CGGAGATCTGCGCGTCTCATCCATGCCACACTCACCTGGTGATTCAGTGCAGAGGCCAGC
TGGGAGACACGGCCGAGCGGGGAGGAGGAAGCAGTGGCCGCAGCGACCTGCCGCGCCAAT
GCAGCGATCATGGTGGGGCGGCGCCCTTCTCCGTGAGCCCGGCCGCAGAGGGGATCGGCC
CTAGGGCCTAGTAGCTGGGCAGTGGCCGATCTAGGAATTTAAAACAGGATGGTCCACCTA
CAAACAATTGACAACAAATATGAAATGCGAACATTCTAATTTACTAACAGCACTGATATA
AATCAATATGGTCTTACAAACACACTAAAATTCTCACTTAAGTCTCAGTTTTGCATTAAA
AAAGCCTACATGGTACATGCCAATTCTTCAACAATTCTACAGGAAAAAAAATAACAGTCC
CTGCATTAGTATTAATCATAGCTGAACAACAGAAAATGAATCAACCAATATAAGGTTTGA
ATCTGAAATTGCGAAAACTAGGGACCGTGGAAATTTGGGATAACTGTACCCATGTACTGT
GTTTAATCGTGGGAGGGTGGGAGGGCTGCCTGGTAGCTGGTGGCCGCAGGCTGCTGCTAT
AGTGCAAGGCAGGGTGCACGCGTCACACAGCCACCCTTGCACACCACCGACCGCCGGACA
GGACTAATCTGCAGACAGGCGACTTGGTGCGGTGAGTGCGCGGGCGCGGCAGTGGCGTGT
GCGGAACGGCTCGGCGAGGCAGAGAGCCAAGCAGGAGGTGTCGGCGGCGAGTGGACGGCG
TGGAATGGAGAATGGACCACGGAGGTAGGCGGCAGGCGGCTGGGCTAGTTTAGATCGGGA
GAGCCACAGAGGGAGCAGAGAGGAATCAGGGATTGTGCCACTGGGACGAGTCCTTTCTGC
CCCCTATGGGCTTCTTGGGCGCAGCACATGCGTTCTTCCGGTGCTGCGGTTTCCTTCGCC
CATGCAAACGGAGGAATCCATCCCGACGCCCCGCCC