Map Locations of contig_71157 (5641 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_71157

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76375 1 338 bp MLOC_76375.1 Available Available None





CDS Structure of MLOC_76375






Contig Sequence (5641 bp)

>contig_71157 5641 assembly3_WGSMorex_rbca.fasta
CGCCCGCCCAGCCGCCAGTGCGTGAAGAAGGCGGAGGAGAGGCTGTACCGGCGGGCGCGG
GCCGAGGAGGCGAAGAGGGCGCGGGGGTCGCCTTCGCCATCGCCGGCGGCCGACGAGGAC
GGCGGGTACATCACCATCGTGGTGGGGAAGAACACCCGGGTCATCCCCTTGCCTTCGCCT
CCCGCTCCTGGCAGCGCCTGAAAAAGGTGGCTTTTGTTAACTTGTCTGATGCAGAGTCAG
TCAGTGTTCCGTTCTAGCGTAGCCTCTGTGCTATGATCTTTTTCTGATCATTCCAATTGG
ATGATTGGATGTCCTGTAGATAACATGAACATGGCGAGGAACTGAGAACTTGGGATCAAT
CCCACTATTTTCGTTTACTATTTGTATCTGTAGTCTGTGACTTGTGACTTAAAGGTGCAG
GTTAATCACTGTAATTTTGTTGTTGTAGGAGACAAAACATTGTACTCTTATGCTATGTAT
GAACATAAATGGACTCAGGTCAGCATATCATTCTTCTTAGGAGTTTCATTAATGCTAATG
TAATAAAGAATGGGTCGTATGTAGAAAATACTAAGTTTATACTTCCTCGTTTTAAATGTT
TCACTAGAAGATTACATATGGATGTATATAGACACACTTTAGAATGTAGATTCATTCATT
TTGTTCCGTACGTAGTTTCCTAATAAAATCTGTAAAAAGGCTTATATTTAAGAACCGAGG
GAGTATTATCTACTCATCCATGAGAGCAAGAGGAATGGAGAGAACATTATGGGAAGCTCC
ATACCGACTTTGCCTGACAATGGAACTTTTAACTTTATACCACTAGTGTGTGATACAAAT
TCCTTGCAACTTCTGTCAAGCATATTGACCCCTTTCTACTGTCAATCTGTCATGCCACCA
CCTCTAATTTAATTAGTTGCAATGCAAATTATTTCCTTGGCAATTTTGTCAAGTCTTCTC
CAGTCTTTTTTAGCTGTCCTCTGGTCACAACTTTGTTCATACTGCTTTAGAACAATGGAG
GAGCAGGAGGAACAATGCAATCACCGCCTTTTTCTGATGCGGGCAAAGATCTTTAGGCCT
TTCTATAAGTCCAACTCAAAAGTATCTAGTTTTTTTCCCCCTTCTCTCTGCAGCGAAAGG
TGATTGATATATTCTTATTGCTGCGATTGTGCCTTCTTCATGTGATGTGATACAATTGTT
CTATTAGAAAGAAACGGCAGCCTCCTGCCTTTGTCCACTTTATAATTACGTTTGGTTTAG
TCTTTCCATCCATCCAGCCAGCTCTTTTGAGATTTGAGACCATGATTTCTTTCTCACGTG
CTCTACTCTGATTGTATTGGTTTGTACAATTAAAGTTTAACTGAAAGAAGCAGAAAAGAT
TCCTAGACCAGCATGACACACGCGGTATACTTTACTAAAAATCCATTCGTTGCAAATAAG
TTTAGAATGTGGATTAGTCAACTATCAGTGTGAGGTTACACCATATCTTTCTGTTTTTCA
GGTATTACTCCAATTAGCAATCAAGTACATACTCAAAACATGAATTCACAGTCTATAATT
TGGCCAACCGCCATTTTCTGATTGGGTTATTCAGAAGCCAGAAGTGCATAAATGGACAAA
CAGGGAACCACCGGCTGTTATTCTCGAAGTTATTAGTAAGGCCATTTCTAACAGATCTCT
TAAAAATAGCGGACTATTCGGTGGAGTAAAACCCTAATGAAGTTGGTAGGAACAACTTCC
CTAGGTTGTAGGGGTGCTGCAGTGGATAGCGAGCCGGCTGGCGCGGCCGCCGGCACTGTA
GCGTCGTGGTCGGGAGAGAGAGAGTTGGGCGCGGCTAGGGTTACGGCACCGGCTCATTCT
AGGAGCCGAACAAAATAGATTGATCTTGCTTAATTCCAATGGTGTTCATTACATGAGTAT
ATATAACTCCTCTAGGCTATCAACTATAATAAACTGGGCTAAACCACTAATAGTATAAGA
TAACTGGGCCAGGTTGGCTAACTGGGCCTCCTCCGGTTATAATGTAAACCGGTCATAACA
TCTCTCCTCAGCTGCGCAAACAGCTCGTCCTCGAGCTGGAAATCTGGATAATGCTGACGG
AACTCCTCCAGGATCTCCCACGTAGCATCCTCCTCTCCAAGACCGTGCCACTGGATCAAA
AGGTGCCATACACCGCGGCTTTCCTGGGCCTTCAATACCTTGTTTGGAGCAGGAAGTAAG
CGCCCTTCAGAGGTTGGCGGAAGATCTGGTCCAGCCACCGGTGCCTCCCCATGGAAAGGC
TTCAATAAGCCCACATGGAAGATATCGTGGAGACGTGCACCAGGGGGGAGCTGCATGCGG
TAGGCGATGCCGCCAATGTGTTTTAACACCTGAAAGGGCGCTGCATAGCGAGGACCCAGC
TTGCGCTTGGCGTGGTGGTCAAGTGACTACGTAGTATGGTGGAGAAGCCGCAGCCACACG
GAACCCCCCACCGCAAACGCGGTGGTGAGCGTCGTAGTATTTCTTGGACAACTGTTGGGC
CTGAACAAGACGTTGCCGCACCTCAGCAAGAATGACATCGTGGTCGCGAAGAAGTGCTCC
CGCTGCCTCTGTCCGTGTGGCCCCGGATTGGAGAGACGGGATGGCCGGAGGGGACCGGCC
ATAAACCACCTCAAAGGGGGAGGCATGCAGGGCGGAGTGGTAAGAAGTGTTGTAGCAGTA
CTCCGCCCACGAAAGCCAGTCCACCCAAGCTCGGGGTCGATCACCTATGATGCAGCACAA
GTACATAGCGATCACCTTGTTGACAACCTTGGATTGGCCGTCCGTCTGGAGATGAAAGGT
CGTGCTCAAGCGCAACTTGACGCCTGCCAACCGGAAGAGATCCCTCCAAACGTGTCCAGT
GAACACCGGGTCACGATCGCTGACGATCGAAGAGGGAAACTCGTGTAGGCAGACAATGCC
ATCGAAGAAGGCTCATGCGACGGAAGTGGCGGTGTAGGGATGGCCAAGCGCGATGAAGTG
TGCATACTTGGAGAAACGGTCCACCACAGTGAGAATGACGGACTTGCCGCCACCTTGGGA
AGGCCCTCAATAAAATCCATGGACATGTCAGCCCACACCTGGGAGGGCACCTCAAGGGGC
TGACGAAGGCCGACTAGCTGCAATGTCCCGGTCTTGTTGCGCTGGCACGTCACACAAGAG
CGCACCCAATCGCGCACCAACGTGCGGTCTCCCGGAAGATAGAAGTCGGCGCGGAGGAGA
TGAAGTGTTTTCTGCACCCCCTCGTGGTCGGCTGAGTGCGCCAAGAGAATCGCCTGGTGA
CGGAGATCATCGTGATCGGGCACAAAGATGCGCCTACCGTGGATGAGTAACCCGTCATCG
AGTCGCCACAGCGCCGGCAAGTCGCCCTCCTCAAGCCGCTTCTTAAGAAGCTGAGCATTA
GTGGACGTGGCAGTGGCATGGCGAATGTCGTCGATGAAGACGAACGAGGGCCCAAAGCGG
ATGCAAAGGGATGTACCCTTGGTGTCGGAGGCGTCGTCACCGACGTCACGTCGTGATAAT
GTGTCCGCCACGATGTTCAAACATCCTGGCTGGTAGTCAATGGTGAAGTCATAGCCGAAA
AGCTTACTCATCCACTGATGATGCGGAATCGTGGACACGTGCTGAACCAACAACAAATTT
AGGCTGTAATGGTCAGTGCGAATCAGGAAGTGTCGCCACCAGAGATATGGTCGCCAGTGT
CGCACCGCATGTACCATACCGATAAACTCGCGCTTGTAGGCCGCGAGCTTATGGTGACGT
GCAGCGAATGGCTGGCTGAAGAAAGCGAGCGGTCCCGTGCCCTGGTGAAGAACAGCGCTA
GAACCCAATCCGGGCGCATCACAGTCAACCATGAACTGCTGCTCAAAATCTGGCATCTGG
AGGACCGGACCGGTAGTAAGAGCCTCCTTTAGTGACTGGAAGGCGGTAACTGCCTCCTCG
TCCCATGAGAAGGCGTCGCGGCGAAGCAGCCGTGTGAGCGGCGCGACGAGAAGGCCAAAC
TCCCGGATAAACTTCTGGTAGTAGTCGGCCAGTCCCAAGAAGCCGCGGAGGGCTCGTGGT
GAGTGCGGTGTTGGCCAAGAAGAAACCGCCGCGATCTTGTCGGCATCCTGGCGACTCCCT
CCGCTGAAATGACATGGCCGAGATATGCGACGGATGTTGTTCCAAATGAGCACTTCGGGC
GCACCGAGGATCAAGTCGAAGCATCCCAAGTCAATGCCCACGCAAATAATGGCGAAGTGC
TCGTCGTCGATGATGATGGGAGCCTACCGTGCAATCTCGTGGCAGCGAAGGCGGTCACCG
TTAGCCACGGTAACCCAGACCTTCTCTCCGCCGGTTGGTTGAAGGGCCAGCCGACGCATG
GTAGACTCAGGCACGAAGTTGTGTGTAGAGCCCGTGTCTANNNNNNNNNGGAGACGCTCC
CCATTAACCGTCACTCGAAGCATCATGGTCTTTTCCGCGCGGATGCCTGCGAGGGCATGG
AGGGAGACCACGAGGGCGGTTGTAACAGCCGGTTCCGTCTCCTCAGCCAGCTCTGGAGAG
GTTGTATCCTCCTCGATGTAGTCCGCTGCCTTCACGTAGAAAAGGCGTGGGCAAACGTGG
CCCGACACGTAGGGTTTATCCGAGTTGAAGCAGAGACCTTGGCGGCGACTCTCGAGCCGC
TCGGTTGGGGTGAGCTGGCAGAATGGGCGAGTCGCAGCCGTGGTGGGGGACCCTGTCGCC
GCTTGGGCCGGTCGGCTAGGCATGGGCGTGGGCGTCTGAGGGGGTAGGCGAGGAGCCAGA
GCGAGAAACGCCTGCTGCATGGCGACGGCGTGCTGCTCGAATGCGCGGGCGTAGTACATA
GCCGTTTGGAGGTCCTGCGGTCCGCGCATCTCGACGTCCACGCGGATGTGGTCGAGGAGG
CCGCCGACAAAGAGTTCAGCCGTTGGAGGGCCGAGACGCCGGGAGTGTGGCAGGCCAGTG
CCTGGAAGCGCTCGGCAAAATCCTGCACCGAGGAGCGAAACGGGAGCCGTCCGAGTTCTG
CCAGTATGCTGCCGCGGACGGGTGGCCCGAACCGTAGAGGGCACAGGTCGCGGAAGCATT
CCCATGGCGGCATCCCGCCCTCGTCCTGCTCGATGGCATAGTACCACGTTTGTGTTGCAC
CCCGAAGGTGGTACGAGGCGATCCAGGTGCGGTCGGACGCGAGCGTCCGTTGCCTCCAAA
AGAACTGGTCGCACTAGTTGAGCTAGTTCAGGGGGTCGCCCGTGCCGTCGTAGGTGGCGA
ACTACAGCTTGGAGAAACGCGGTGGGTGTTGGCCGTAGCCGGCGGACATTAGCGGATTGG
TCGTGCGGAGCAGTGGAGCCAACTAGCCCGGGAGGATGGGCTACAGTGGCCCGCCGTGGA
ACAGGGGGCCGTCAATGCCAGCATAGGGTCCCACTGGTCCGGCGGAGCCGGCGAGTGGCC
CGGCCGGGTGCACCGCCGCTGGGGCCGGTAGGGAAAGTTGCACCATGGCTGGCGTCTAGA
TGGGCTCGGTGAGCTAGGCCTGTTGGGGAACGTAGAATGGGAAACAAAAAATTTCCTANN
NNNNNNNNNNNNNNNNNNNNNNTGATGATCATCTATGAGAAGGGAGAGTGAATCTACATA
C