Contig Data
morexGenes
Links



Map Locations of contig_71153 (2753 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_71153

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76374 2 1099 bp MLOC_76374.2 Available Available LOC_Os09g07200.1, FRAME:+3, EVALUE:3e-49, 13109.m00564 protein transposon protein, putative, unclassified





CDS Structure of MLOC_76374






Contig Sequence (2753 bp)

>contig_71153 2753 assembly3_WGSMorex_rbca.fasta
GGGACGGAGGGAGTACTAAAATGTGACTAGATATATTAATATCTAGACAAATCTAAGACA
ATAATTTTAAGACGGAGGGAGTATATCTCTAACAGATGGACATGTGTAATTGCAACGAAA
GAAAACTTACTTACAGCCAAGTGATGCTAAGATTCGTCTCAACCAAAACATTCATCGATC
TTAATTCTCCTTTTGGTAAACAACATACATGTGCAATACATGTATTTGTCAACCAGGCAA
GGCGGAAGATTCGAAACATATGTATGCTTATGTTGGATCGTCATCCAAAACATGGAATCA
TCAGTTTGAGAGTGTTTTTATACAAAATATACTGAAGAAACAAAAGAAAAGTACAACGCC
TCACCTAAACTATCAAGGACGCCACTGCAGAGCGGCGCCGCACAGGGGCTCTTCCGTGCG
GCGGCCAGGTTGCCAGCCTGGCTTCTCCTTTTTTGGTATGTGCCCCGCACTTACGAGTCT
GTGTGATGCAACCACCAAGTAAACATCATATTCCCTGTCTGAAGCAACCACCCCTCATCC
ATAAATATCTCCCCCCACCCATCACCAATCCCAACAACCCCATCACAGATCCCCCACCCC
CCACCACCGTAATCTCTTCCCCCCTTCTTCTTCCTCCCTCCCCAATACTGCATTGGCATG
AACACACAAAAATCTGAAGGAAAAATAACAACACAACCAGCAAGAAGAAGGTGAATTCTG
CAATTGTCTAAGTCATCCAAGCAGCAAAATATAACAGGTACGCAACTGCCCAATACCAGG
ATCATTCCAACAAATATGAATCTACTTACAGAAGAAAAAAAATATAGAGAACATGTACAA
ATTACTGCACCCTCAGATCTCTTGTTTCTCCCCCTCAAAGACAACACCTATATTTTCTCC
GCACCCACAGATTTCCACCTCTCATTCTCCTCTCTGGATCTTCAGCTTATGATCCTCTTT
CCAATTCCCCTGTCCCAGAACAAAAAAGTCAGAAAAAAACACTGATATATTGTCTCCATC
TGGCACAAAAACATGCAGGAGGAGGAAGGACTTCCCAAAAGAAAACAACAAGAGACAGGA
CACATATATAGATGGATTCTCACTTTGTGGCTGCTCATGACACAGGTTTGTCCCTCTCTC
CATATAGTTTCCAATTTAATTGTTGTTTTTGTCGTGTTTTTGCTGCTACCAGAATTCCTA
CATTTTCCACCTAAACCACCACCATCTAATTGTGTCATCATATTACAAAAGTACTTTGTT
ACCAGATTACAAACTGCTTGCTTCCTTGATGCATGTGCATGGTGTTATTACTTAGTTGTC
CAATTATAATTGGTTGTTGGCTTGCGCGCTAGTTGCCATATTAACCGTGCTTACTCACCA
GATTAACCGCGCTTACTCACCAGGATCTAAGTACTTGGTTATAATTTTAGAAAAGATTAT
TTCTCAGATTAAGTATTACTTAGTTGTCAGGTTGCTAAAAGTAGTTGTCAGGTTGCCTGA
TTACCAAATATTTAGACATGGCCTATCAATATTTACACCATGGCCTACCTCTAGCTACAT
GGATGAGTTGACCTCTTGTCACTGTATAAAATGTCTACTTGCCAAATTACAAGTAGCTAG
TCATCATATTACAAAAGTGCTTTTGTTACCAGATTACAACTGCTTACTTGCCTGAATGCA
TGTGCATGGTGTTATGTGTGTTATGCATCACAACTGATTACCAGATTACAACTACTTACT
TACCAGAGTTGACCTCTTATGTGTGTTATGCAGATCGTGAGACTGTCGGTGCATCACGCA
CTGTGTTAGAACGACCGGCCAACACGGACCAAACATTGGATGCATCGTCTAATCGCACAC
CAAATGATGACAATGCAAATGAGGATGAAGGCATGCCGGAGGTGATGTCCACACCACAGC
AACCCACAACCATGATGAGATTTGACACTCTTGAGTATGTTGAAAAAAAATACAAAATGT
ATGTGAGGCAGAAAGGTTTTGGAGTGAGGTACTGTTTCAGAAAAAAGTCGGAGGCTAGTG
GTGAACTGATAAGAGCATCCCTTGTGTGCCATAGAGCTGGGTTGAATATCAAGAAGAAAG
TAGACACCCAAAACCTGCAACATATTGCCCCTGAGAGGTGGAGGAATANNNNTGAAAGAA
CAAACTGCCCAGCCCGTATGTTTTGAAACGGAGAGATAATGCCTGGGTTGTTACAGAAAT
AAATGACGACCATAACCACCCTCTCATCAAGAAGTGGTCGCTGATAGGGTTCCTACGATC
ACATAGACATATCCCTGAAGAAGAAGAACAGTTTGTGAAGTTGCTTCACTCGTGCAATCT
GGAACCTTCTAGACACATGCAGTTGTTGACAGAGTTGCATGGCCAACGTGAAGCAATTGG
TTACACTCATAAAGACTTGGCAAACTTTCTGGCAAAGTTTCGGGCCCAGCATAAATACAC
TGATATGCAAGACACTATTGAGTACTTCAAGAGCAGTCAACAACTTGATAAAGACTTTTT
TTACAAGTACAAGCTTGATGATGATGATAAGGTCCAATGCATTTACTGGACTGATGGTTC
AGCGAGAAGGGCATACAAGTTTTTCAGTGATTGTGTCTCTTTTGACACAACCTACTTGAC
CAATATATACAAGATGCCTTGTGCCCCGTTTATTGGTATAAACAACCATGGACAGTCAAT
TCAGTTTGGTTGTGCTTTCGTTAGGACCGAGCTATCGACAAGCTTCGTTTGGC