| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_71093
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_76363 |
1 |
1916 bp |
AK367568 |
Not available |
Available |
None |
CDS Structure of MLOC_76363
Contig Sequence (6031 bp)
>contig_71093 6031 assembly3_WGSMorex_rbca.fasta
GAGCTCAACTCCCTAGAATAAAATCAACACAGTAGGAGGCACCAAGTCAGAACTCNNNNN
NNNNNNCATCATATAGATTTCAAAAATATCTGTGTGATCATAAATATTTTTTGAGTGAGA
AGATGAGTAGAATTAAAATTATTACGTNNNNNNTCCTCATCAGAGCATAGAAGAGGAAAA
AAAAAATCTCACTCTCTGATATATAACTAGACTCAAAGCAGTTTTTCATTGGACTCCGCC
AGCGGCACCTGCCATACCAGATCTGACCGGTGGCGTTGTCGACTAGTCAACTATGGCCAC
ATCCCTCCTGATCCGTCCTCCCCACAAAGTCGCCGGAGCAGCGCCAAACCGCCGGGAAAG
ACGAAGACGAAAGGGTGATCTCGCGCCGCCGGTCCCTCCAGACCGTAGGGCTGCAGGCTA
GATCCCCGTCGTCCCCATCACCGGCGGCACCCGGGCTTAGCCGGCGCACGTCTCTAGGGA
CGACGAGGTGGATGAGATGGGGGGAAGGGCGGCGGCCGGGGCGCTGGGGTTGGCTCCGTG
ATCGCCCTCGAGGGAGCGATACAAGGAGTCCTCCTCTCTCTCTCGGTTGCCTGTGTGTGT
TGTTGTCCTGTTTGATTTTTGTAAAGATTTCAATTCGTACTATATACGGAGCAAAATGAG
TGAATCTATACTATAAAATATGTATATATAAATCTGTATGTAGTTTATAGTGTAATCTCT
TAGAATACTTATATTTATGAACGGAGGAGTATGTACGAACACATAAACTGATCCATATTT
AGTTTCTAACCGGAACAACATGTAATGAAGATAATCCCTGTAGAAGTGGTGTGGCTGGGA
TTTTTGAACCCTGATAGCAAGAAATTACGTTGCCTGATACACGAATCTCCTGACCTTGTA
TGTCACTTGCTTGTAGGTTTGTGCAAGTGTATCTTCCGATTCAACGAATATGAATGAGCT
TGTTCAATGGAATGATCTGTATGGAGAAGGTGGGTTGAGGAAAAAGACAATGCTAAGCTA
CTTTATGTAGCGATGTTGAAAGCATGTACATACATGAGCAATGGCTGCTATTGGAGGGGG
GCTACAGTACAAAGAAGTGTAGGCATCTGCTGCTAGTATTCATCAGATGAAAATAAGGGA
CCGTCATACTGAGAGCAACAGCAACGGAGGGATGCAAATCTGGTTGATGCCTTGATGCTT
GTGGTAGCTCAACAACAGCACAGCTGACATGGCCTGCTCCAGGCACATCACCATCCAAAT
GAGATAGATTTTTATTTGTAGCTCCATCATGCTTGGCTCGGGTCAGGCTGTCAGTCGTTT
TCGGCCTGTTATTATTGAGAATCTTGGTTTGGATCAGGGTTTTAAATTGCCGGCTATTAT
CAGTATTGCTCTTTCTGCAGTGTCCAGCTATTTTGCTTTCCTTCATAATCTTACCGCTAT
AGCTCGCTATAGCCTTAAATAGCCCAGCTATAGCCCCAAATAGCTCAATGGAAAAGTCAC
GCGTTAAATCCAATAGCCGGCAATTTAAAACCTTGGTTTGGATCGCGAGTTGTAGAGCCT
GATCAAGTGTACAGTATGAATGAGCATCAGGTCAGGTCAATTAACTTATTATTGTTGTCA
GTTAAGGAAATATTCATTTTATCTTATTATAACCAGAATAATTTACAACTTGGTCTCATG
ATCATCTTTGATGTTTTGAGCCTTGCCCTGGCCAGATTTTTTCCTTTTTGTCAGTACTGG
AGGTGATTGTTTTATTTTGCGCGTACTGGTGCCTGCGTGCAGGATCACGCTACTGGGTCA
AGAGTAATGTAGGACTAGTGCATTTCCATACTTGGTGTCGTAATCGTTTTTGACGATTCA
ATATCTGCCATTATTGGAGGTGCTTGTTTCCTTTCGACCCTGCCTGCGTGTGTAATCACG
CTACCAGGAGAATTGTATGAACCAGAACTCTGCAGGTGCTAGCGGATTTTTTTTTATTTT
TTTCTTTTGAAAATTTCTGATTTCTAATGGTGGATCTTCAACTCGGAGCTTTCCTTGAAA
ACTTTAATCCAAGAGAGTTCTTCCATTTTCTTTCTAGCGCCAGTAAACAATTCTTAGTGT
ATATTCTTGGACTTTCAGTTTATGTAGGATTCATTTTGTTTTGATAATTCACTTTGGATT
GTGGGCATGAAATAAATTTTCATTTCTTCAGTTTGTCAAAAGAAAACCATACATTTAAGT
TTGGCCGTTTCATCCAAATCGGCTTGCATAACTTTTATGATGATTCATTGTGTGTTACTA
TCATCTTTTGTAAAATATTTTCATACACCGGGGGACACGTGCAGTATCTTTTCTCTGTCC
ACTGATTTTCCGAGTCTTTGCAAAAGAAAAAAAATCTTAAAAATGAGATTTTTTTTTCCG
GACATGCTGACATTTATGTAGATGATCAAGTGGATGAGATCATTCAAGTGGATGGATCTG
CACGTCTCATATAATCATGGACCGAAGAATACGACGTTGTGTTTCTCCTATTTTTTTTCT
TGAAATTAAAACACAATAATGCAGATGTCGACGCTTACAAACACGTACATACACTCATTT
CTATAAATGTCTATTGTAAAGTTGAAGTAGCTGGATACAAGACGATGAGCAATGACGACG
ACACTTGTGGAGAACCGTGGCCAATGCTCTCTTCTCATTGGTAACCAAGTCGTATGCTGT
CATGTTCGACGATGGTAGTCTTATGGGCGTGTTTGTAACGGCTTTTTTGCCCCTTTTTTT
TCGCCAACACGATTCTGCCATGGCTGCTGGCTGCATGAAGCAGCTCGCAAGTCTTCCTCT
CATGCCAGGTCAGGTGCATTTTCGGCCCAAAAGAAGAAGACAACCATTTCGGTGAGTTTC
ACGCAGATTAGCAACCAACAGTTGAAAATAGATCAAGGAACTGTTCATCTACAATCTCCA
GCGTCTTCTTCCTCGCGTAGCCCCCAGGCCTAACCGCCTGCCTCCGTGGATGGAACGGTG
GCCTCCTTCTCCTTCCTTCCTCCCTTCCATACGTACGGCCGTACGGGACATGATCGATGG
AACATAAACTTATTCTTTCTAACCTTAAATCGATCACGCCTAAGCAAATCACGCCACAAG
GTTTCCAAAGAAAGAAGAAAGAAACAACAACAATGCAAGAAAAAGAAATTACACTCTGCA
GCAGCAGGATGAATCTGAGCATGCATGCATCTCACAAGAAAATCACACCCTGTCCCTGCT
AGCTCGTACGATGCGATCGAATGCTCACATGGAGTGGTTTATGAGGCCATGCACGACAAG
GAGCCCCATGATGAGCGAGTGGTCCACGTTGGGCTCGACCACCAGCGTGAGCACGTCCTC
GCCGAGGGAAACCCCCGTCGCCGTCAGCTTCCTCTTCACCTCCGCCACGGCCAGCCCGGT
GGCGTCGTCCACGATCCAGGAGGCGCGCGCCGCCTGCTGCCGCCGCCTGCCTCCGTCCAT
CTTGTAGCGCACCGCGTGGCCGTCGCTCCTGAACTCGCAGCGCGGGCCGCTGCCCCACTT
GTTGCTCACCACCGTGAACCACGGCCGCCGCCGCGGCGTGTCGGCGGCGCGGGCGCGCTC
GGGCGGCTCGGCCTCCCACCCGCCGCACCTGTACCCCTCCCACCTCCTGAACTTCTTGAG
GACCTGGAGCACCACGCTCCCCGTGATGTCCATGAGGCACACGTCCACGGACCGGTGGGA
GCCGTAGTTGTCCACGCGGTACACGATGCGCCCGCGGGAGTCGAAGACCGTGCAGCCGCT
CCCGTTGAGCACCAGCGACTTCATCCAGATGGTGAACACCTCCCTCTGCTGGCTCCTGTG
CTCTTCCCCTTCGTCTTGCTCTTTGACTACTTCTACTTGGACGGCCGCCGCCTCGGCTGG
AGGGGCACCGGCGGACGGCGTGTCTTGTCGGAGTAGCCGGTGCTGCGACGAACAGGAGGC
CGAGGAGTGTACCTTGACCTTGGGCGTCCAGAGTTCAGCACCAAGGCACCATCTTGCGCC
TCCCATGAGTTGCAGATTAGGTCGATCTTCTACTACTACTTCTACTTGATTATGGGAGCT
ATTGGGGTTTCTGTAACCATCGAGGTCTCAGTGTGTGTGTGGGTGTGTGTATGCACACAC
GCACGCAACTACACAAGGGAAGGTGAAGGTCGACATGGGAGAGAGAGAAAGAGAGAGAGA
GGGAGAGATTATATTAGCTTAAACGTGTGGGAGATAGAGATAGGAAATAGTAGTAGATGC
GTTTGTTTTCTGCACTGAGCTCGTCAGCCGTACTCCACTTACCGTATTTGATTTATGTCA
TGCTTATCAAGTTGGCACACATTACTAGCAACTATCCCTGTATATCTATAGCTGATGCGG
AGACTTTTCCTGTACTCGCAACTAGTGCTTACTGCTACGTACTGATTAATGTTTAGTATA
TTCGCAAAAAAGAAGATTAATGATTACTATTACTAGTATTTGTTGGTGCAGCCCCAGTCT
GCACGCCAAGGCAGGCTGTCACATCAACAGTATTACGATACTTTGCCGACCAGCACTAGA
ATCTGGGGTCGCCTCTCTTTGTCCCTTTGAAATGAATTGCTCCATTATTTGAAAATCATT
AAGCACGATGCATGCATGCATGCATCTCGCTCGCCTACAATGTTTTTAGATATTTACTGC
TAGTACTCTCTTCGTTTCTAAATATAAAACATTTTAAAGATTTTATTACAAAGAGTAAAA
TGAGTAAATATATACTTTAAAATATGTTTATATACATCTGGACGTAGTTTATAATAAAAA
TATTTAAAAAGTCTTACATTTAGTAATGGAGGAAGTAGATTTTTTATCTCGCCCTCCTCC
ACTAGTAGAAAACGGGGCTATAGTTTCGGTTGCCGGGACTATTAACTTGAGACAAAAGAC
CCCCTCCCCCCCCTCCCCATTTAGTTCCGGTTTGCTACGAACCGGGACTAATACATTTCC
ACGTGGCTCGCAGCATGTGGCCGAATCTTTAGTCCCGGTTGATAACACCAACCGGAACTA
CACGCTTTGGTGATTTTGGGTTTTAGGGTTTTGGGGTTTTGTTTATTTTTTACTTTTCAT
TTCCGTTTTCCATTTAATTTTTTTCATTTAGAATATATCTTACGCTAGTACATACCGGAA
ACGTTATGCATATATAATAGGATTTCTCGTAGGACCAATCATATATCATAGAATTTTGAG
AGGGACCAAATGCATGCTCATATTATATAACATATATCTATATATACAATTCCGTATATA
CAATTTCTCATACAACCTGCGGATCAATTACATGCATGCATTAANTGGTGAAGTGGTATT
CTCCTTTGGGATCTATGACCTGCTCGAGCAAAAATCCGGAAATTTCCTCTTGAAGTGCTC
GTATGCGTTCCGTTCGGAGGAGTTTCTCCCGCTTCTCCAATCTCTTTTAAAGAAGGAGAC
CAATATAAATATTTTATACATGCGTATATATATTAGACCATGATATAAAAATTGTGAATA
CTTTTTACGTACCTCAAGATTTCCTCGATTTTTATCCGTCGTTCGATTATAAAGTGAATG
TTCTCGCAAACATAGTATGCACATAAATTATTCCCCGGTTGCTGCCGCATGCAATGCTTT
ACGAGAATAAAATTCAGTCAGATAATAATCAAGCATTATAATGGTACTGAACTAGAACAA
AGGAGATGCACAGACGTAGCTAGTACTACTTAATTACCGTGGACGTTGTCCATCGCAGCT
TTGGTTTCCATTCACCGTGAACATTCTTGATGAACCGACTCCAAACCCTGCCTGGCAAAG
AAAAAGAATAAAATGAGTCATTGATTAATTGATATCAGGAAATGAATTAATGAGGCCGAC
ATAGTGTGATAATGATTGGAATTACCAGTCGAGAATGAACTTGAGGGACATGTACTCGTC
CTCGTCTTTTCTTAGTGAGTCCAGTACGTGAACGGTTCCCTCGTCAACCGTAATGACTAG
CAGGATCGAGTGGAATCTGCGTTGTATAAGC
