morexGenes - Barley RNA-seq Database

Contig contig_709

Source Contig contig_709

Contig Data

|Contig Location|
|Microarray Probes|
|Predicted Genes|
|CDS Structure|
|DNA Sequence|

morexGenes

Links

Map Locations of contig_709 (494 bp)

Morex x Barke POPSEQ 2013	Oregon Wolfe POPSEQ 2013	Morex Genome Release 2012
		No map location

Predicted Genes from contig_709

Gene ID	# CDS Predicted	Max CDS Length	Probes in Cluster	FPKM by Treatment	FPKM by Replicate	Top Rice Hit
MLOC_76301	1	491 bp	MLOC_76301.1	Available	Available	LOC_Os11g11020.1, FRAME:+2, EVALUE:9e-26, 13111.m01169 protein DAG protein, chloroplast precursor, putative, expressed

CDS Structure of MLOC_76301

Contig Sequence (494 bp)

>contig_709 494 assembly3_WGSMorex_rbca.fasta
GACGGCGGCGGCAGCGGCACGGGGAAACTACGGCGGGGGCGCAGACGAGGCCAAAATCGA
CCCCGACGAGATCCTCTTCGAGGGGTGCGACTACAACCACTGGCTCATCACCATGGAGTT
CCCCGACCCCAAGCCCTCCCGCGAGGAGATGATCGAGACCTACCTGCAGACCCTCGCCAA
GGTCGTCGGAAGGTATAACGAAACTCCCCTTATTTCGTTTCTCGTCAGAAACCTGTGAAT
CGATCTGGAATTGGACTTGTCTCCGTGTCGAATTAGTCGTATTTCGTTTCTCGTCAGAAA
TGTGTGAATCTGTCAGGAATTGGACTCGTCTCGTGTCGAAGTAGTCTCAGAAGGGTGAGT
CTGATTGCTTTTTATTTCTTGGGCCTTGTGTATGATTGGAGTGATTGAAGTCTGCGTATG
TGTGGTATTCATTTGGTTATGATATATGGCCGTGCTGTTTAATTTGATTGTCGTTCCATT
TTTATACTCCCTCC