Contig Data
morexGenes
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Map Locations of contig_70838 (4667 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map locationNo map locationNo map location




Predicted Genes from contig_70838

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76284 1 2966 bp MLOC_76284.1 Available Available LOC_Os12g34094.1, FRAME:-2, EVALUE:9e-80, 13112.m08818 protein NADH-ubiquinone oxidoreductase chain 4, putative
MLOC_76285 1 1582 bp MLOC_76285.1 Available Available LOC_Os12g34094.1, FRAME:-1, EVALUE:3e-98, 13112.m08818 protein NADH-ubiquinone oxidoreductase chain 4, putative





CDS Structure of MLOC_76284






CDS Structure of MLOC_76285






Contig Sequence (4667 bp)

>contig_70838 4667 assembly3_WGSMorex_rbca.fasta
AGTTATAGCTTCTATAGTGAGTGGCCCTTCCGCTTTGATCTAGTTGTAGTTTGTATTGTA
CTAAATTGAACACATATCAAAGAAAGGCGATCAATCAATAAGTAGTTGCCCTTCTCCGGC
CTGGGAAAAGCAGCGAACTCGTTAAACTAGGGGCTTTTTTATTCATGGTCGCTACTGTTG
TATTGTATATTGTCGGGGGAAGCTACTGCTTTTACGACAGCTCCGCTTCCTCGTCTTGCT
TCTACTTTGCTTGTTTGCGCGAAGGCTTAGAGTCCTTTTCGCTAGGTCCAAATTCGTCAA
AGCGAAAGATCTGATCCAACGGAAATCCCGCATATTGAGCGCAGCTGATATGTGGCTACT
AGGCGCGATCATCCCGCATGCCATAAAATAAATACTTCTTTTTTTTATGGCCCGTCATAT
AAAGATAGAATAGATATGGATAGAGAGACATTCTATTGATTCGCGAAATGGCTCGTCGAT
CCAAATGAATCATTCTTCTGGTCTCTCTCTGCCCCCCCGCCCCAAAACTGACCCACGACA
CAGCGCCCATTCGTTTCGCGCGCGGGAAGGCAACGAAGTTCAGTTCAAAAGACCGCAGCG
GAGTGGAGCAGCCGCGCCACGAAGTTCCTTACCTTAGCTGGATCTCGCTGGTGCCACCTA
AACGGTAGGTATAGGCGGCGGATGTCTGACGTTTGGAGTTGTCGTTCGTGCACCTGTCCC
CAATAGAAGAATGAGTGATCCCTTCCCCTGCGGATCATGGCCTTACCACTAGGTCCCCGA
TGGCCAGCGGGGGATTCGGTATAGCAGCTCACGTTCGTTTGCGCTTCGCGTTCCCGCTGG
ACTGGACACGTGTTAGCTGTAGGAAGTATGGTTACGAAAGTGACTTCGGTTCGCCAGTTC
AGGCTCAACTCCTCGCTTTACGTTAGCGGACTTACAGGTCGGGCCGGGGCTCCACGCTCT
TTCTTTCTGTGTGGGACGATGCCGGGGAATGTGTCGAGGCGGCGAACAACAACAAGACAA
CTAACTACATTTGCTTTTTCCCTCCATGAGATGAGCCAGTGCATTGGACCGATGGATAAT
AGAACTGAGCTGGCCAAACGCTTGGGCGCTCTACATACGATGTAGAAAAAATCAGATACA
TATCGATTTCTTTCTGATGGATCCAGAATAGATAGATATCTTGTATCATCAATAGATAGA
AAGAGGTCAACCCTTATTATTGATAGAAAACCTTTCGATCTATCAGAACAGATCAGGCCA
TCTATCAATCGATTTGAATCATCTCGCTTTTCGTTCATTTCAGCCACGCCATAATAGCCG
CCACAATAAGAAAGAAGCAAGCGAAACAGCTAGAAGCGCTCGCTTCGCCGCGCCCAACAA
TTCTTATTCACGGGAAAGCCAACCGAAAGATTCGATTCGGACTTCGTAGAGCCGGTGCTG
CTGCTGTCTGCGTAGGGCCGTCCCCCACTCCCGTCCCGGGGCGCTAAGGGGTTTTGTTTT
AGGAACAGACGGCGGTGTTTTGCTGACGCCTCGAATCGACGCTTTTGTTGCGACATGCTA
AGTTTTCTCCCCTATTGCTAGTAGGTTGATGGGTCGCACGCCCGGCACACATGTTTTGGC
CTTGCTTGTGTGTCCATAACTCAAAATAGGTGACCTAACGGCCGCCGCCCGACTAAACAT
ACCAATAGTCACCAAATTCATATGGGCTACTGAGGAGTAGGCAATGATCTTCTTAAGATC
GATCTGTCTTAAAGTGGTCAAGGAAGTATATATTATAGCAATCGCGCTTAGAGTATAAAT
GAAAGGAGTGAAACAAAGTGTCGCTTCGGGAAACATGGGTATTGAAAATCTTAAAAACCC
GTAGGTTCCCAATTTTAAAAGAATTCCAGCCAAGATGACGGATCCAGCCGTAGGTGCCTC
TACATGGGCTTCGGGTAACCAAATATGAACTGGTACCATAGGCACTTTGACGGCAAAAGA
GGCGAAAAAAGCAATCCATAGAAGGATTTGGCGCCGCTCACTAAATTCAGTGGTTAATAA
AATTTGTAAATCGGTGGTTCCTGTTTGGAGAAGAATCAACAGAATAGCTAATAGCATAAA
AACGGATCCAAGTAAAGTATATAGGAAAAACTGATATGCTGCCTTGATCTTTCTTTGTCT
CGAACCCCATACCCCTATAATGATGGTAGAGTCAGGGGTGGCCCCAAAGCGGAATTGACC
GGTGGTAGTTGGTCGAAGCTCCAGTGGGTAGCCACTCCCTTCTCAGGGAACCGTACGTGA
GACTTCCGCATCATACGGCTCCGTCCCGAGCTTCCGTCGTCGGCCCTTGTCATTAGACCA
CTATGCTTGTCTTTTCCGCCTTGACTCTCGAATCTTTTGCTTCTCGGGTGGTGGCGAACA
ATGCTGCTTGCGTAGCGGGAGATGCCCGCCCGTCGTTTAGGCCTGCTTCCTGCCCGAAAG
AAGGCTAGCCGGACTAGTGGTAGGGGACCCGACCGTAAAAAACCCTACCCTATTCTCGAA
CCCTCTGCCGAGCTCTACCCTGCCCGCATTTATTTGGAAGGGGGCCAAAGAAATGTCTCC
ACCTGCTGCCAACAGTCTTTCTTCGGAATTCTACTGAACGGGTCGATCCTCCCCTCCGTT
TGTTTTAGCAACTTATCCTAAGGTCTCTTCGCCAAGAACTCTCCGGCAACGACAGAGGAA
CTAACCTGCCTGCAGTGGCGGGGCGGCTTTTTTTTTTTGAAATAAGACCTGGACGATTAT
CCCTACCCTCGGTAGCTTACGAGTTTACGTCCATCCCTGGTCGGGTACAGTTTCCTTTAT
TTTTATCCCTTGTAGCCGTTACCCGAATTCGCGCAAGTGTGTCCACACCCCCCCTGACTT
GACGAGGAATCCATTCTCGCGAACAAACACACCCCCTACACACACCTAGGAGCACCCCTT
CCTGCATATCCATACAAGACCTGAGTAGGCGGGTCGAGGTCCTACGAGGTACCCACTACT
CGGAGTACCCTCCCACCAAAAAAAGATGTGTGGTTCGGTGGTTCGACCAGAAATGCTATG
CTTACGCACAAGACTACCCCTCTTCCCGAAAGCTTCGCGGGGACCTTTACTACTTTACGA
CGACGGGGGACCGCCCGTAGGGGGTTTACTGCACAAGGCCCCTGCAGAGGAAAAGCTTGA
TCCCAGCGAATAGAAGATGCTCAGCTCCGCACAACATAGGGATTGGCACGCTTTCGGAAA
GAACATAGAATAGTAGAGGATCCAGCATGCAGGACACGGCGATCATTAGAAATTCACGAA
TTAGAAATGCTGTAATATACTCTTTCCCAAAACTTCTCATACCAGACCAACCCACTGAAA
TGCAAATAGGGATCAGAAATGTGGTCAATATCACGAAGAATAATGAAAGACCGTCTATAC
CCATATACAAATGGATGTTTTCATAAGGAAGCCATCGAAGGCTTTCCACAAATTGAGATT
TGGCCGTAGAAGGATCGAATTGTATCCGAGGAACAGGGGGATACAAAAAAGTAATAAGAG
AAACGCACAGACCAATCAATCGTATCGGTCTTATTGAAGAATTTGGAATGAAAAGAGGAG
TAATGCTTCCTAGCACGGGACAGAGAATAGGACCACTTAGATCGAAATAGCATTCACAGA
AATGTTCTAACATAGAGTAGAATTGAACATTGAAAAGATTAGTTGACAACAGTCAATCAA
AAGATGGGGCGCCAAATTACTAAACAATAGGGGTCTTTCTGTGCAAGTCAGCTGAACACC
GTAATTGATGAGTGAGTAGGTGGGTTAGGTGCACCCCTCGCCCAGTGGGAAGTCATGAGG
CTAGCCCCCCCCCCTGAATGAAGAAGTAGTGGGGCCCCCTGCCCGCCCACGTATGCGCCT
TTATTTAGATTCTAACTAAATATTATACTGAACTTTATCCGGGAATCTTTCTAAAGAATC
CATCTGGCAAAACGAAATTTGTCGATTTCAATCTAAGGTGCACCTTGCCTTTTTCAGGTA
GCTTTGTTACGCCTATTCAGCTAGGTGGGGCATTGGTCATAGCCGAAGTCGAAGGGAAAA
AATAAGGTAATGAGATGATGGTGCCATCAAGAAGTTTTCGACGAACGTAGTAGCGGCCAA
AAATGAAACTCTTGCATGAAAGACCGGATTTGACGCAAGATGAATGGCGTTGGGGTTTTT
CAAATGAAACCCGCGATCAGAAAGTCACCAACGGAGCCATACAATCTATCTAGTAGTGTG
CCATGGCACGGTACTCCGCTTCGGCAGTGGAAGGAGCAACTGTCTATTGCTTTTATCTCA
TCCAAGATAGTGTCTCGTCTCCCCATAAAATAGATAAGCCTGTAGTTGAGCACCTATCTG
AAGGCCCAATCGGCATCAGTAGTTGCACGCAACTCTAAAGAAGACGATGACGGAAAAAAG
GACGGCTCGAGAAAAGGTACCTCGAATATATCTAAGAATCCGATGAACTGCTGCAAAGTG
AACTGACCGGGGGGCAGCCATGAAAGGCTGACTTTCTTAGGAAAAGCCATCTGGGCAAGA
GATCGTCAGATAAACCAAACTGCCGACCTACTGTCTGTACTGCGTCGGATCAGATAATGG
TGAGCCATCAGTCGGACGGAGTTTAACGTAAAGCTCCAAGGGAGTGT