Contig Data
morexGenes
Links



Map Locations of contig_7056 (3359 bp)

Morex x Barke POPSEQ 2013Oregon Wolfe POPSEQ 2013Morex Genome Release 2012
No map location




Predicted Genes from contig_7056

Gene ID# CDS PredictedMax CDS LengthProbes in ClusterFPKM by TreatmentFPKM by ReplicateTop Rice Hit
MLOC_76213 2 3189 bp MLOC_76213.1 Available Available LOC_Os09g38980.1, FRAME:-3, EVALUE:2e-27, 13109.m03902 protein T-complex protein, putative, expressed





CDS Structure of MLOC_76213






Contig Sequence (3359 bp)

>contig_7056 3359 assembly3_WGSMorex_rbca.fasta
TCGCGGCCTGCTTAATACTAATAGGAATAACCTCCTCCGATGCCAACATCTTACCTTTTC
AAATTTCATCCATACTATAATTCCTGGCAAGATCAAGGGACTTATAATAACTATCCAAAA
ATTCCATAGGAACATCAACACATGATTCAACTTTTATACCGGTTGCAATATTGCTTTCAT
GGCCCGGTATAGTAATGAATCCAATGTAAGTGACATTTCAACAAACTCGACTTTTTGTAT
GGTTTGATGCTTAAGGATACTATCGTGACTAACATGGATATAGTTTCTAAAAACACAGGT
CACCAACTTTCTAACAGCGCTATCAGTATGCACAACACTACTGAGCATTCGTTTTTCTTG
TCAGGCTGACTCGTACCCTTGGATATGAGCACATGAACCTATCCCAAGAGGAGAGCGCCT
TTATGTATCTTCTAGTTTTTCGGTCGACATATACTCTTGGGACACGTCATATGTTGCCCT
TCGTGTGGATTAGCTTACCAACTTAGCTTGATGTAGTTAATTGTGGGGCTTCACTACACT
ACATGATCAACCGAGTCTTTCTTATACTAGATGTTAAATTGTTCGATACTTCATCATGTT
TGAGCATGTGTGGGACTGGGAGGTAGATGGAATCAGGATGCATAGTGCGGCGATCCAATC
CACACGAAGAAGGGTGCATGTGCTTGCTTCTCACATATGGCCGTGAGTTGGTTAGGAATA
GCATGAATGGTGCAAACAACTAGCATCACGATACGCCTGGATTGACCGAAAGTAGGAACA
AGCAATCCACACTTTCTCATATGATATTGCACAAGGGGCTTCTTCTGGCCTCCATTTGTA
TTTTTTAGTGACCCTTAGATGATGTAATTATTAGTTGATGTGGTGCGTTAGTAGCTTGCG
TCCTTAAATTAACTTGTTTCTTTTTTGTTAATAAGTATTCAGTAATTAGCTTAGGCAATT
GTTTGAGAGATTGTTCAATGCGGAAATTACACTACCATTTGACATCAACCACGAAACACA
GAAAGGTGTACACATGTAGTGTTTCTTTTCTTCACCTTTTTAGGTATCAACCAAGAGGCA
GCACACTGCCATGAGAAACATATTTGAAAGTAAAAGCATAAAATAGCTTCATAAGCATAA
GGAAATCAACATAACATGCCAGTTATCCTGTGCTTCTTACAAAATTCTGCATATATGAAA
AATAATGCACAAGATACAACTACAAAGTGGTACAAACGACATGATATGATTGAAATCAAT
GGGTCCCAACTCCCAACTCCCCACCCAACTTCCCCTACAAACCAAACATTTTACTTGAGT
TTAAGAAACACTTGCTTATAAACACGACACGATGCATTTTTTTTACCACTTCATTGTGTA
TCAAACAAAGGACAACACAGGATGAGCATATCAGAAGTAGAGAGCCAAGACTTAGCTTCT
TAAACATTTGGGAAATCAACATGAAAGTTATGCCAGTGTAATCATACTATGTTACATGCC
ATAAAATATTGTGCAGGTATGAAAATACTGCACCTAACATATTTTTCATTTGGGGATAAT
CTGCACCTGGCATCTAACAATAGTACAAAGAGAGATAGTGAAAATACTGCACCTAACAAC
ACTAATGACAGAACAGAGCAAGCCTAGTTATAGTCGAGATCATGAGAAGAGTTGTCCTTC
ATGGGCCCACTCTGTTTGTATCTTAGCTCATCGAAACTAACACACGAGGAACAAAATGAT
CTTCACATCTATGGAACCTTAATTGATAATAGGGTAAGAATTGCTCACACCTAAGCATTT
TGGTTTATCTGTAATGGTGGGAGGACTGCAATTTCATGAATGGGTGAATTTTTCTTTTTT
ATCTTATCAAACATCATTGCTTGGGTTATTAGAATTAGCATTGCGATAGAAGCAGAGTTC
TGGAGCACGCATCTTGGAACCCGGCATGGATCGACCACACTAGCCTTAACAAGGTCTTCA
AATTTATCAGTTCATCGCATTGTACCCAACTCGCCACTCACTTGTGAGAATCTTCTCTAC
GACAGCAAAACCATTGTAGTAATATTGCTCCCATAGCCCAGTATAGTAATTAATCCAACG
TTAGCATCAATGTGTCAGTTCAACGAACTCAATGTTTTGTATGGTCTGAAACTTAATGCT
TCTATCACGACTAACATGGATATAGTTTCTAGAACGAAGCTCACTAACTTTCTAACAGTG
CTATCAGTATGCACTAAATTAGTACTACGCACGGCATGGATGATTTGTTTCCTAGCTCAA
TTGCATTCTGATGAAAAGTAAAATCGAAGAAAATATGAAAAACATTCAAAAAAATGCTTA
ACTCTTTTTGTGCTAACATTGGACAAATGTTTTGTATGCTTGCAAAATTTCAATAATATT
TTCGCACTACACATTTGTTTTTCTTGTCAGGCTTACCCATACCCTTGGATATGAGCATAA
GGACCTGTCGAAGAGGAGAGCCTTTTATAAATCTTCCAAATAATTTGTCGACGCATACTC
TTGGCACATCAGCACATGTCACCCTTCTTCGTGTCGATTAGATTTCCAGCTTAGCTTGAT
GTAGTTAATCGTCTAGCTTTGTTATACAGTACATGATCAACCGAGTCTTCACTACACTAG
ATGTTCAATTGTTGTTTACTTATGTGCCATCATGTTTGGAAATTTTATCAATGAATGGAC
TATTGAACAACTCACACATGTTCAAATGAGCGGAACAAAATACAAACACATGCCCTATCT
GCGTCCCTTTGTCTGACTGCCTATCAACAGCTGCCTCGCGAGGAGCGAACATCCATTTAT
CTATTCATGGCTACACAAATGTTGCCATTTCTTTACACTAGATAGATATTGGCATTAAGT
TGCTCTTGTTCTGCTATGTCATGGACAAACGGAGAGGTGGCCTTAGGTCTTATGAATCAA
CCACGACTTTGACTCTTCCAATGTCAACTTGGATACTTATATTTCGCCCGAAACTTTGTA
CATTTTTTCAGAGTTTAAGTCATACATAAGAAGGCATGGGATGAGCTTCACAAGCATTCT
GCACGTTCTAGAGATTAATTGTTGGCAGCCAACATTAATTGCTTTTCTTGTGACCATTCT
TCACATTTCTTAGCTGGCTATGCCATCTCCATATATAAGTCCCTAAGTCCCTTTGTGCAT
CCAAAATATCAACTAGTGGTTGTGTGCCAAAAACACACAACTTCTTTTATTAGGTAGGGT
CCGTAGGAAAGAGGAGTGAGAAACCTCACATATATATACTTCCACCGCCACCAACATCTC
TTACGAAATGCGCTCCAAAGTCTTACCTCCTCCCTGCTTTCAGTGGTGTTCCTTATGTG