| Morex x Barke POPSEQ 2013 | Oregon Wolfe POPSEQ 2013 | Morex Genome Release 2012 |
|---|
 |
 |
No map location |
Predicted Genes from contig_70474
| Gene ID | # CDS Predicted | Max CDS Length | Probes in Cluster | FPKM by Treatment | FPKM by Replicate | Top Rice Hit |
|---|
| MLOC_76191 |
1 |
2726 bp |
MLOC_76191.1 |
Available |
Available |
LOC_Os08g05750.1, FRAME:-3, EVALUE:0.0, 13108.m00567 protein pentatricopeptide, putative, expressed |
| MLOC_76192 |
3 |
2516 bp |
MLOC_76192.1 |
Available |
Available |
LOC_Os02g19130.1, FRAME:-3, EVALUE:0.0, 13102.m02139 protein transcription factor X1, putative, expressed |
CDS Structure of MLOC_76191
CDS Structure of MLOC_76192
Contig Sequence (8888 bp)
>contig_70474 8888 assembly3_WGSMorex_rbca.fasta
ATTCTTGATGAATCTCGAACGTGATGGTACACATATTCATAGTGTGGGTACCAAAAGATG
TAAGGTTGATANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNATCGGTGT
CAAGCGCATGAAGAACCTCCATAATGATAGTCCGCGTTTCTTAACGCTTCCCGCTTAACA
ATCTACAAGGGTATGTTGATCCGANNNNNNNNNNNNTAGATGATCATCATCATGATAGGT
CTCTCGTGTGCTTAGATTTTTTTTTTGTTTTCCATGCAACATTCCCCAACAATATAGCAG
CGAGCAGGCGAGCATGCGGAGCGGTGCCAGGTGAACACGTGGCAGGAACCGACGGGACGT
GCATCGCCGGGTCTTCACTGTGTCGCCCGTGAATCAATGAAAGGCTGGCCGACGACGTAG
CCTTCGTTGATTCCCGCGGGAAACAAGGAGATGAGGACGACGACCGCGCGCCAGTCGCTG
ACTCAACGGGCCCAGAGATTTTTCGCGCCAAAAATGTTTCCGCCGGCGCCCCGGACGACC
CCAGCGTGCTGGGTTCGGCCTGAGACCGCCGGAGCCAATTTCAGCCCTACCCAGCGAAAA
ACGGGCTCCTGGAACGCGACTGGGCCGTTTTTTCTCGTCAGTGAAAAAAACTGGCCGCGC
GAACCTGTTGAGGGCGCGGCTGAAGATGCTCTTATGCAAACTTGTATTTCTTTCTATTGT
GCCATTCACTGCAGTAGTGGTTCACAACTCTCTGCTGTGAATCAACAACTGCAGTACTAG
TATGGATAGTTCTATGACTTGGAGCATCATACACATCTACAACTCCCTGATACCGAGACA
AAAAAAGAAAAGAAAAAAAGAACTCCCTGATACCGAGATGCAAAACTTTATAAAACAAAG
GCACTTTAGCAAGAAATCCTCGCCCGCAATTTGCCTATGGATTTTGCACCCGCGCAACAA
CAATCAACAGTGTCTGTAAAGTTACATAATAGGCTTTGTTGGACCTCACAGTAATCCTTT
TCTTCCAGCCCAATAACACAAAGGAAAACAACAGTTGTAAACTGCTCAGGTTCTAGGCTG
TTGAATATTTCGCGGATCCATTGCAGATCGCACAACATTCCTTTTCTTTTTCTGATTATT
GTAAGGGGTTCAAGTAATGTTGCCTCCCTCTGGAAATTGGCATCTATCCTTATTATGGTC
CAATCTTTCATGAACCAAACGAAGCTGACAAGTGCAATCTGTCAGTTGACCTGAACCCAT
GAATCAACTACTGGAGCAGTACAAATAGTGCTGGGACTTGGAGCATACACATCTCCAACT
ACCTGATACCTAGATGTGAAATATAAATCAAATGTGCTTCATCAGTCCTTCCATACACCT
TTGCTTCTTGATATTGCACTCCTGCCACATCAATCAACAATGTCTCTGTCAAGTGCCACA
ATAGGGTTATTAGGCTTCGCCTAACCTCACAGGATACAACATGTTGTCCAAGCAACAACA
CTAAGAAACCACTATGGTAAATTCTCACATGTCTTGTTCTTGTTAAGGATTAATTGCTGT
TGCATCCCTATCAAATTTGCCAGTATTATACCAAACCTTGTTACTGGCTTTATTCACCAG
TAATCTCCACATGAACAATGCCCACCTTTAAAGTGATGGAAACGTGTTGTATCCCTCAGG
ATGATTTCTCTATCCTCGATCTTGGAGATGAGCTTCGCAGCATTATGACAATCTCCACAG
ACCCTGAGATTCTTGAATATCCTCAAGGTTAACCCAGGTGCGGTACTAATCAGGCCAAAA
GCAATAGCGAGCTTCTCACTGTGCCTCATTAGCATCTGCACCTTAAGACTCTCGTCTACA
TCATGCAGTACGAAGTCAAGATCTGGAACATAACCCATTGCCTTCATCCGCTCCTCCAAC
CGGTCCAATCTTTCATGAATGAAACGAAGCTGAGGATGTAATCTGTCATTTGATCTGAAC
TCATGAATCATGCCCTTTATCTCAATCCAGCTATACCCAGGTGTTTTGACAACTGCATTA
TCCTTCATCCACCTCCTTACTCTGGAGACGTCATCCCACTGATTCGCTACAGCATAAATA
TTTGCCAACTGTACATAGGCGCCTGCGCTCTGTGGGTTCTGTTGGATCAGCTTTCCAGCA
GCAAACTCAGCAAACTCCAAGTTTTTATAAACTCTACAAGCAGCCAATAGAGTGCCATAG
GCAGAAGGATGTGGCTCAAAAGGCATAGAGCTAATCAAGCACACAGCTCTTTCAAGCAAA
CCGGCTCGGCACAGGAGATCCACCATGCAAGAGTAATGATCAGCCCGGGGCTCGACTCCA
TAGATTTCCTGCATTGTCTCAAAACACTGTATTCCAAAATCACAAAATCCAGTGTGGATA
CAAGCAGTCAGCACTACCACAAAAGTAATCCAATTAGGCTTAACACCTAGAGCCTTCATC
TTTTCAAACAATTTGATAGCTTCCTGCCCATGGCCATGCTGTGCATATCCTGAAATCATT
GCATTCCATGCAATTACATCCCTTGTACGCATCTCACCGAACAGCTTGCACGCTCCCTCC
AAGTCGCCGCACTTGCAGTACATGCTCACGAGCGACGTGCCAACGGTTATTCTCCGACTC
AGCGGCAACTTGGTGCACCACTGATGTACCTGCCTCCCAAATCCCAGCGCAGACAGGTTG
CTGCATCCAAGGAGCACGCTACTTAACGTTGACTCGTTCGGCCGAACATCGGCATCCCTG
ACTATCGTCTTGAACACCTTCAAAGCGTCATCCGCGCGTGAGTTTTTGACGTAGCCAGCA
ACCATGGCATTCCAGGAAACCAAGTTCCTCACCGGCATTCCTTGGAAGAACTCCGTTGCC
TTGTCCACATGGCCAGCATCCATGTACCCTGACACCATGGCTGTCCAAAGGACGGGGTCC
TCCTTGTGGGGCGCGTCCCTAAAGCAGTCCTCGGCCATGCCCATGTCCCCAGCGGAGGCA
AACCCGGAAACCATGGCGTTCCAGGAGACGGAGTTCCTCGCAGGCATGGCCAGGAACAAG
GCACTGGCCTCGTCCACGGCCCCGTTCCGGGACAGCCCGGACACCATGGTGTTCCAGGAC
GCGACGTCCCTGCCCGGCATCGCGGAGAAGAGCTCCCGGGCGCCGCGGACGTCGCCGGCG
GCGAAGTGGCAGGAGAGGAGCGTGTTGTAGGAGACGACGTCGGGGTGCGGGATTCGGCCG
AACAGGTGGCGCGCGCCCGTGAGGCGGCCGCCGGGCGCCCTCGCGTAGCCCGCGAGGAGG
CGGTTGTAGTCGGCCGTGGTCTTGCGGGGGGTGGCCGCGATGGTCTCCGCGGCGCCGGCG
AGGTCGCCACGCCAGACGGCTGCCGTGGTGAGGGAGCGGGCACGGACACCGAGACGAAGT
CGGCGCCCGATCATCTGTGTTGCACCCGGACAGGCATGTGGGACGCGACTAGTAGAGTGG
GAGGCGGGGAGCAGCTGCAGGCGAAAGCGGGCACCGCCTGCCTACTTGTGGTGAAATTGT
TTTGCGCCATCCCACACCCTCACCCCTCTCTGCGCTGTTCCCTTCCCCTTTACCTTTGGT
TAAGTAATAATTTAAATCGGGCGACCAGCCGAAGCTAGCATCGACCTCTCACTCGCACAA
GTAACCTTTACACATCTCATAGCGAATAACGGGCACTGGGGACTATAAACACGCCCGTGT
AGATGCAATGACTGGCATTGTGAAGCGGCGCACCCGATGCTGCAACCATGGGCGGATGAG
CTGCAACCACAGCTGGGGGCGGGACAGCGCAACGGGCGCTCGGAATGCGATCGGCACCTA
TACGAAAAACCAAATGTGCCAAATAAATTCTCACATGGACAAACAAAAGCATTGAAATTT
TGAGGCTAAACCACGTCTTCCAACTTCAGAGCACAAGTGCTCCCCTTTTTTTTTTTTTTT
TTGTGCGGGGGAGAGCACAGGTGCTTCTCGCAACAGCAAAAAGGCTGGTCGCGTTCATGC
CAGCTGCCAACAGCCCAACAAGGAAAAAAAACACTCATGGAAGACAATAAAACGATCCAA
TGCAGAAAAAAGAAGCAATCATAATAAGGAAGAAAAACGATTCATTGCGACCATTGTCTG
GCAACTCCGAATGGAATAAAAGGGGAGATACATCACTGCTCTCAGACTGATTGAGCAGCA
CATAGCTTGCAGGTTCACCAACATTATTACAAGGGCACAGTCGCGAAGTCTTCTCCGATC
CCCAAAATGAAAACCTTAGCTTGTTCGAGTAGCAGGAATGTAGTAGGATACATTTATCAC
CTCTTACGTTTCGCCTTCCACTGCTTGAGGATATGCTCCACCACTTCTCCCATGCTAGCC
TTCCTGTTCTCTTTGTTGTTCCACAGCTCTGAGACCACGTAGCTGCCGCTGGCATTGTAC
TCGTTCATCTCCACCAGCGCGGTGGTCACAGCCTTGTAAACCTCTTCGCCCAGCTCCTCC
TTCAACCCCACCAGCTTCTCGTCGCCTCCGTCGATGATTTGCTGGGGACACATCACATCG
TGTTAGCGTTGATCATTGCACCATGTACGTACTTGTCAGCAAGTGTTTGTTTAAGACAAG
AAGGCACAAGATAAGAATCACTCAATTGATCGTTCGTACCTCAGACTTTTCACCTGTAGT
CACTATCTTAAAAGGGTGCCAATTGGCATCCCTCATATTGTCTTGCCACATGGAGCATAA
TTCAAGAGCTTTTGTGTCCGCCTCCACGCCATACTTTGGCTTGCAAGCTTCAACAAACGG
CTTCTCGTCCACCTGACCCATCCTCTTGATTCCAATGTTGCTACGCGGGCCCAACAGATC
CGCCAAGCTCTGTAAGCCAACAAGCTCAAGAATTTAGTCTACGGAATTCTCCCCGAAAAA
TAAAAAAACTGTTAAGGAGAACAAGTGTGTATATAACGTTACCAAAATAAGCTCCTTCTT
TGCATCTTGCAATTCATCATTGGTCATCCTTTCCTTGATAATCAGAGTTTGATTTAGCTC
TTCCAGGTCTTCCATTGCGTCAATTCTATCCTGCAGATCCCTATTCAGCTCTTCGGTACG
CTTCTTCACATCGACACCCTCTCCCTCCATGTGCTTCACCACCTCCAGTTTGCCTCTAAG
CTGTTGAATATCCAGCTCCAGCTGATGCTTCTCATCCAGCTGCTTCTCTAACTGCAAGAT
TTTGTTCAGAGCAGCTTCCTTCTCTTTCTGGAAGGTATTTGACATGTCAGGGTAAATTCT
AGATTCTGTTTCTAATAAAAAAAAAACCGTTTCTAAATTCTAGATTCTGGAATGAAAACT
CTCAAGACATTTGAATGGCACCAACAATTGGAAGGGTAGGAGTGCATACCTTGTGTTTCT
CAACAAGAATTCGCACACCTTCATTGGCTTTTTCTTGCTCAATTCTGGCCATGTTAAGGG
AGTCGTTTTGACCATCATTCTGAAGGGAAATTAGTTCAGCAGTAAGATAACTAGCCAGCT
AGTTTTTTCCACAAAAAGATCACCACAAGCATGCCAAAATGCTATTCCGAGAACAATATC
AGTATGTAGTAAACAGAGACAATTTCTAGACCAAGAAAGCTATTCACTGAATTCCGGTAT
AAATGATGCATTTTATAGTAAACAGTTATGTGAATAAATTTCAAACCTTCTTCCTCTCAT
TCTCCAATTTTCTTCTTTCCATGTCAGTTTGAGCAACTATTTCACTTAGTTGCTTTGATC
TCCTTTTGATGTCGTTCTCTTTCTCATCCAACTGCTTTCTCAGCTGATCAGTCTCATGGA
AAATTTTTAGCGAATGTTCACGAGCAGTTGACTGCATCTTTCGCATTTCTGTACAGAAAA
GAAATAAACATGATACAGTAGACATGATCATATTCACAATGTAAACAAGTGGACCATTCA
TACAGCAATTGCACGAGACTTTGGGGGTGGGGAATACCTTCGTTGTAGCGTTGGTCCAGC
GAGTCGCCATCTTCCATGGCCCTTTGAAGAGCAAGATCCATCTGATTACACTTGCACTCA
AGTTCCATCAAGTACTTGCTCTTAGCACTAATCTGGCTCGTCAAATTAGTTATGAGAGTG
TCAGTCTTGCGGGACATCTCCTGTTGCAGTTCAGCCACTGTCTTGAGATCACCATTTTCT
GACAAGAACTTGCCAACTGGATCATCGGCTTTGTAATCCTCCTCTTTTGCCAGCCAAGCG
AACATGTACTTGCCACATTTATTTGCCTCCCAATCCGTTTTACCCAGATGATATGATTTG
TAGTAGTTGTGGAATCCCAAGGCATCCTTGAACCCGATCCAATCCTTGTTGAAACGGACT
ATTGCAAAGCCAGTGTACCCGCCGTCAGGACAATGCACAGCATTGAAATGTATGGGCTTG
AAACCAGCCAGCTGCTGCAATATAATGGCTCCACCTCTCTGTGTTTGCTCTACTGGAACA
TTGGCAAGGATGCCCATCCAGGGCCAAACGAACAGCTCCTGGTCCTGCACAGGCCTTGGA
GGGTTGATGAGCGCCACGGCCTGTCGCGGAGGCAACGAGCCTGCAGCGTCGGCATGGTCC
GTCTTGAGATGGTTGGCCAATGCCTGATGGTTTGCCTTCACTTTGGCGGCACGGTTGGAT
GTGCCCACACCGATTGCGTGCTGAAGCAGCTCATTGTATCGGTAGTCCTGCTTCTTCTTC
CCGGGGCAGAAGGGGCACCTAAACCTGTCGGCGCCGAATCTCGCCACAAGCTTGCCCAAC
TTAAGGTTCGCGTACGCCTTGTCAGCATAGTCATCGATATCGGTATCACTTAGCTCTGAC
GACTCGTCTGAACTGCAGTCCATAGCAGACCTGAAAATAAGGGATGATCAGATAGAAACA
ATAAGCAGTTGTTAACTAACACATGGACGTTATGTAACCAACAAGAGGAGCAATGTTATG
TAACCAATCCACAACAACAAGAGAAACAACTTAGGCGCACCATACCAAACGTGTTATTAA
AACAACAAATGCACACATGCATGGAACAATGTTCAAGATGTAAGCATGACTAGCAGACCT
CATTCGACGCTGCTCATACGCACAAAGGGAGCGCACATTCACATACAAAATCGCACAAGG
AGAAACAACTTGTGCGCAACATACCAAGTGTGTTATTAAAACAACAAATGCACACATGCA
TGGAACAATGTTCAAGATGTAAGCATGACTAGCAGACCTCATTCGACGCTGCTCATACGA
ACAGAGGGAGCTCACATTCACATACCAAATCACATAAGGAGAACACGATTGAGGCATCCA
TATGTGGGCTAAATTAGGATCAAACGCCAGCGCACCTCAGGAACTGAACAATGTTCAAGA
TGTAAGCATGACAAGTAGGCCTCATTCGACGCACCGAGGGAGCGCACATTCACATACCAA
ATCGCATAAGGAGATACAACTTGTGCGCACCATACCAAGCGTGTTATTAAAACAACAAAT
GCACAATGCATGGAACAATGTTCAAGATGTAAGCATGACAAGCAGACCTCATTCGAGGCT
GCTCGTACGCACAGAGGGAGCCCACATGCACATGCCAAATCGCATAAGGAGAACACGATT
GAGGCATCCATATGCTGGCTAAATTAGGATCAAACGCCGGCGCACCTCAGGAACTGAACA
ATGTTCAAGATGTAAGCATGACTAGTAGGACTCATTCGACGCTGCTCATACGCACTGAGG
GAGTGCACATTCACATACCAAGTCGCATACTAAGGAAAGAACAGGACTGAGGCATCCATA
TGCGGGCTGAAGACCAAACGCCAGCAGCCAGCGCACCTCTTTCTCAAGGGTCACAAACCC
TCTGAAGCAATACCACAAACACCTCGTGCTCACGCGCGGCGGGGTCGTAGCTGGGGACGC
GCCGAGGAAGCCGACCCGTCACCGGCAGGAAACATGAGAGCGCACGGCGCCGCGAGCTCG
GCATCGTCGCCACCGTCCGCGGCCGGTGCCGGCGAAAAAGCTGAGATGACGGCCTATCTA
GAAGCGACCTCCGTTTTGTTGGGCCAGAAACAAATCTCCCCGTAGCAGTTTTTAGCCCGA
TCCCGCTCAAAAAACAAAAGTAAATCTAGCCCGACTGTTCTAAGAAAAACAGGTAGATCT
AGCCCAAGGCCGGCCCATCCAGCCCATCTGGCTGGGAAGAAATGGATCTTGCGTGCCAGA
GGCCGTAGTCGGTGTTAGTGAAATAGCCTAAAAAAGAAATGGTGCGCGTGAAACGCAGGG
CTCCCCTCCCACGATCATCAATCGACAGAAAAAAGAAATGATTCAAAGAAAAAAAAACAG
AAAAGAAAAAACCCTCTTGCGCCGCCAGTCAGTCACCGGATGACACACGCAGGCACACAA
AGACGACGGAATCATGGCAGAAGAGCAAAGGAAAGGAAAGGAGTAGAGCAAAGAACATGC
ATTACCCCGTCTCTTGGTGGCCTGGATCTCCTGAATCGATGGATCCGACGCTGATTAATC
AACACCTGCAAGAGATTAATGAGAAGAGGCAGAGAGATTAGTCCAAAGACAAGGGAGGAG
GACGAAGGAGAGAAAGGAAGTTGCGGAAGGAGGCCGATCGATCGACCACGAACAAGAAGA
AGAAGCGGGCAGAGAGCGAGAGGAACGGCCAGTACTAAACCAAAATAACACGGGGAAGCT
AGATCGGGAACATATATGGAGATGAGCATCCGAAATAACATGGAAAAAATAAACAGTGGC
GGCAAGAGAGATTAAACCATAAGAAACCAGGGGAAAAGAAGCGGAAAGAAATAACACAAG
AAAGAAAAGCAGAGCGAGAGCCCGAGAGATGATATCACTGTTAAAAACAGAGGGGGGGGG
GGGGGGGG
